RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 ZNF561-AS1K7EIQ3 104 aa12.26□□□□□ -0.45
LETM1-202ENST00000466175 BAALC-AS2P0C853 105 aa12.26□□□□□ -0.45
LETM1-202ENST00000466175 C9orf116Q5BN46 136 aaPredicted RBP12.26□□□□□ -0.45
LETM1-202ENST00000466175 C10orf25Q5T742 122 aa12.26□□□□□ -0.45
LETM1-202ENST00000466175 C1orf43Q9BWL3 253 aa12.26□□□□□ -0.45
LETM1-202ENST00000466175 DNAL4O96015 105 aa12.26□□□□□ -0.45
LETM1-202ENST00000466175 DNAH10OSP0CZ25 163 aa12.26□□□□□ -0.45
LETM1-202ENST00000466175 A0A1B0GX51 115 aa12.25□□□□□ -0.45
LETM1-202ENST00000466175 NHLRC4P0CG21 123 aaPredicted RBP12.25□□□□□ -0.45
LETM1-202ENST00000466175 C2orf48Q96LS8 159 aa12.25□□□□□ -0.45
LETM1-202ENST00000466175 FAM240AA0A1B0GVK7 77 aa12.23□□□□□ -0.45
LETM1-202ENST00000466175 C6orf48Q9UBA6 75 aa12.22□□□□□ -0.45
LETM1-202ENST00000466175 SNCGO76070 127 aa12.21□□□□□ -0.46
LETM1-202ENST00000466175 CAMK2N2Q96S95 79 aa12.21□□□□□ -0.46
LETM1-202ENST00000466175 DNAH9Q9NYC9 4486 aa12.21□□□□□ -0.46
LETM1-202ENST00000466175 S100A7L2Q5SY68 101 aa12.2□□□□□ -0.46
LETM1-202ENST00000466175 LINC00526Q96FQ7 95 aa12.2□□□□□ -0.46
LETM1-202ENST00000466175 A0A087WYN8 130 aa12.19□□□□□ -0.46
LETM1-202ENST00000466175 ACYP1P07311 99 aa12.19□□□□□ -0.46
LETM1-202ENST00000466175 INAFM2P0DMQ5 153 aa12.19□□□□□ -0.46
LETM1-202ENST00000466175 C15orf56Q8N910 161 aa12.19□□□□□ -0.46
LETM1-202ENST00000466175 IGKV2D-24A0A075B6R9 120 aa12.18□□□□□ -0.46
LETM1-202ENST00000466175 PRR3P79522 188 aaKnown RBP12.18□□□□□ -0.46
LETM1-202ENST00000466175 NCR3O14931 201 aa12.17□□□□□ -0.46
LETM1-202ENST00000466175 LECT2O14960 151 aa12.17□□□□□ -0.46
LETM1-202ENST00000466175 Q9HAA7 133 aa12.17□□□□□ -0.46
LETM1-202ENST00000466175 HIGD2BQ4VC39 106 aa12.16□□□□□ -0.46
LETM1-202ENST00000466175 LINC00167Q96N53 147 aa12.16□□□□□ -0.46
LETM1-202ENST00000466175 RMI2Q96E14 147 aa12.15□□□□□ -0.46
LETM1-202ENST00000466175 LINC00588Q9Y4M8 146 aa12.15□□□□□ -0.46
LETM1-202ENST00000466175 IGLV6-57P01721 117 aa12.15□□□□□ -0.47
LETM1-202ENST00000466175 XGP55808 180 aa12.15□□□□□ -0.47
LETM1-202ENST00000466175 ORMDL1Q9P0S3 153 aa12.15□□□□□ -0.47
LETM1-202ENST00000466175 UPK3BQ9BT76 320 aa12.14□□□□□ -0.47
LETM1-202ENST00000466175 C22orf24Q9Y442 160 aa12.14□□□□□ -0.47
LETM1-202ENST00000466175 NDUFC2-KCTD14E9PQ53 114 aa12.13□□□□□ -0.47
LETM1-202ENST00000466175 Q8NDZ9 215 aa12.13□□□□□ -0.47
LETM1-202ENST00000466175 Q6ZRU5 148 aa12.12□□□□□ -0.47
LETM1-202ENST00000466175 Q8N814 137 aa12.12□□□□□ -0.47
LETM1-202ENST00000466175 MT-ATP8P03928 68 aa12.11□□□□□ -0.47
LETM1-202ENST00000466175 HUWE1Q7Z6Z7 4374 aaKnown RBP12.11□□□□□ -0.47
LETM1-202ENST00000466175 C6orf99Q4VX62 202 aa12.11□□□□□ -0.47
LETM1-202ENST00000466175 RPL18AQ02543 176 aaKnown RBP12.1□□□□□ -0.47
LETM1-202ENST00000466175 SYCNQ0VAF6 134 aa12.1□□□□□ -0.47
LETM1-202ENST00000466175 WWC2-AS2Q96NR7 200 aa12.1□□□□□ -0.47
LETM1-202ENST00000466175 OBSCN-AS1Q96MR7 158 aa12.09□□□□□ -0.47
LETM1-202ENST00000466175 H3BQ85 93 aa12.08□□□□□ -0.48
LETM1-202ENST00000466175 TMEM256-PLSCR3K7ERE1 68 aa12.08□□□□□ -0.48
LETM1-202ENST00000466175 LINC00575Q6W349 94 aa12.08□□□□□ -0.48
LETM1-202ENST00000466175 XAGE1AQ9HD64 81 aa12.08□□□□□ -0.48
LETM1-202ENST00000466175 M0R378 163 aa12.07□□□□□ -0.48
LETM1-202ENST00000466175 TRBV7-6A0A0J9YX20 115 aa12.06□□□□□ -0.48
LETM1-202ENST00000466175 VPREB1P12018 145 aa12.06□□□□□ -0.48
LETM1-202ENST00000466175 TRAV23DV6A0A075B6W5 121 aa12.05□□□□□ -0.48
LETM1-202ENST00000466175 TRBV10-3A0A0K0K1G6 114 aa12.04□□□□□ -0.48
LETM1-202ENST00000466175 TLX1NBP0CAT3 122 aa12.04□□□□□ -0.48
LETM1-202ENST00000466175 DIRC1Q969H9 104 aa12.04□□□□□ -0.48
LETM1-202ENST00000466175 JMJD7-PLA2G4BH0Y9G9 81 aa12.04□□□□□ -0.48
LETM1-202ENST00000466175 hADV29S1A0JD25 119 aa12.03□□□□□ -0.48
LETM1-202ENST00000466175 SLPIP03973 132 aa12.03□□□□□ -0.48
LETM1-202ENST00000466175 Q6Q795 121 aa12.03□□□□□ -0.48
LETM1-202ENST00000466175 GHRHP01286 108 aa12.01□□□□□ -0.49
LETM1-202ENST00000466175 GAGE2EQ4V326 116 aa12□□□□□ -0.49
LETM1-202ENST00000466175 Q6ZRP5 223 aa12□□□□□ -0.49
LETM1-202ENST00000466175 GAGE2DQ9UEU5 116 aa12□□□□□ -0.49
LETM1-202ENST00000466175 USP17L23D6RBM5 183 aa12□□□□□ -0.49
LETM1-202ENST00000466175 ZNF73O43830 326 aaPredicted RBP12□□□□□ -0.49
LETM1-202ENST00000466175 GAGE2BQ13066 116 aa12□□□□□ -0.49
LETM1-202ENST00000466175 PLA2G2DQ9UNK4 145 aa12□□□□□ -0.49
LETM1-202ENST00000466175 SDIM1Q6ZPB5 146 aa11.99□□□□□ -0.49
LETM1-202ENST00000466175 GAGE2AQ6NT46 116 aa11.98□□□□□ -0.49
LETM1-202ENST00000466175 LINC00643Q86TS7 51 aa11.98□□□□□ -0.49
LETM1-202ENST00000466175 COX7BP24311 80 aa11.97□□□□□ -0.49
LETM1-202ENST00000466175 C14orf132Q9NPU4 83 aa11.97□□□□□ -0.49
LETM1-202ENST00000466175 ELOF1P60002 83 aaKnown RBP11.96□□□□□ -0.5
LETM1-202ENST00000466175 TENM2Q9NT68 2774 aa11.95□□□□□ -0.5
LETM1-202ENST00000466175 TTC32Q5I0X7 151 aa11.95□□□□□ -0.5
LETM1-202ENST00000466175 C9orf129Q5T035 196 aaKnown RBP11.95□□□□□ -0.5
LETM1-202ENST00000466175 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.94□□□□□ -0.5
LETM1-202ENST00000466175 NKAPP1Q8N9T2 125 aa11.94□□□□□ -0.5
LETM1-202ENST00000466175 IMUPQ9GZP8 106 aa11.94□□□□□ -0.5
LETM1-202ENST00000466175 APLNQ9ULZ1 77 aa11.94□□□□□ -0.5
LETM1-202ENST00000466175 TRBV7-7A0A0K0K1E9 115 aa11.93□□□□□ -0.5
LETM1-202ENST00000466175 CASC10Q5T4H9 136 aa11.93□□□□□ -0.5
LETM1-202ENST00000466175 C3orf84H3BNL1 204 aa11.93□□□□□ -0.5
LETM1-202ENST00000466175 CCKP06307 115 aa11.93□□□□□ -0.5
LETM1-202ENST00000466175 UBE2DNLQ8IWF7 75 aa11.93□□□□□ -0.5
LETM1-202ENST00000466175 IGLV5-37A0A075B6J1 123 aa11.92□□□□□ -0.5
LETM1-202ENST00000466175 A0A1B0GV72 72 aa11.92□□□□□ -0.5
LETM1-202ENST00000466175 KCNQ1DNQ9H478 68 aa11.9□□□□□ -0.5
LETM1-202ENST00000466175 CSMD3Q7Z407 3707 aa11.9□□□□□ -0.5
LETM1-202ENST00000466175 LOC107984640A0A0U1RRK4 108 aa11.89□□□□□ -0.51
LETM1-202ENST00000466175 Q6ZQY7 126 aa11.89□□□□□ -0.51
LETM1-202ENST00000466175 SMCR5Q8TEV8 140 aa11.89□□□□□ -0.51
LETM1-202ENST00000466175 NUPR2A6NF83 97 aa11.88□□□□□ -0.51
LETM1-202ENST00000466175 PDE6GP18545 87 aa11.87□□□□□ -0.51
LETM1-202ENST00000466175 RBM3P98179 157 aaKnown RBP11.87□□□□□ -0.51
LETM1-202ENST00000466175 LINC00528Q8N1L1 170 aa11.87□□□□□ -0.51
LETM1-202ENST00000466175 DNAH7Q8WXX0 4024 aa11.87□□□□□ -0.51
LETM1-202ENST00000466175 LOC110117498A0A087WWA1 95 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms