RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
NUP98-208ENST00000461047 LINC01620Q4KN68 170 aa3.8□□□□□ -1.8
NUP98-208ENST00000461047 LBHQ53QV2 105 aaPredicted RBP3.8□□□□□ -1.8
NUP98-208ENST00000461047 C9orf116Q5BN46 136 aaPredicted RBP3.8□□□□□ -1.8
NUP98-208ENST00000461047 SLC25A34Q6PIV7 304 aa3.8□□□□□ -1.8
NUP98-208ENST00000461047 PAM16Q9Y3D7 125 aa3.8□□□□□ -1.8
NUP98-208ENST00000461047 DYNC2H1Q8NCM8 4307 aaKnown RBP3.8□□□□□ -1.8
NUP98-208ENST00000461047 A0A096LNI7 61 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 A0A0J9YXY3 114 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 A0A0U1RRA0 63 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 DLEU1O43261 78 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 CDK2AP2O75956 126 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 SMIM6P0DI80 62 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 COX8AP10176 69 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 IFITM1P13164 125 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 TSPEAR-AS2P59090 65 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 PYY3Q5JQD4 70 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 Q6ZRP5 223 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 MIR7-3HGQ8N6C7 128 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 NKAPP1Q8N9T2 125 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 C7orf33Q8WU49 177 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 SND1-IT1Q9HBX3 110 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 XAGE1AQ9HD64 81 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 CBY1Q9Y3M2 126 aa3.79□□□□□ -1.8
NUP98-208ENST00000461047 PCP2Q8IVA1 136 aa3.78□□□□□ -1.8
NUP98-208ENST00000461047 BOD1L2Q8IYS8 172 aa3.78□□□□□ -1.8
NUP98-208ENST00000461047 LINC00518Q8N0U6 118 aa3.78□□□□□ -1.8
NUP98-208ENST00000461047 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
NUP98-208ENST00000461047 SPACA4Q8TDM5 124 aa3.78□□□□□ -1.8
NUP98-208ENST00000461047 PLAC8Q9NZF1 115 aa3.78□□□□□ -1.8
NUP98-208ENST00000461047 A0A087WYN8 130 aa3.77□□□□□ -1.81
NUP98-208ENST00000461047 CHTF8P0CG12 524 aa3.77□□□□□ -1.81
NUP98-208ENST00000461047 Q6ZSA8 131 aa3.77□□□□□ -1.81
NUP98-208ENST00000461047 C14orf144Q96I85 54 aa3.77□□□□□ -1.81
NUP98-208ENST00000461047 HIST1H4GQ99525 98 aa3.77□□□□□ -1.81
NUP98-208ENST00000461047 STARD9Q9P2P6 4700 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 LOC105371267A0A1B0GV96 52 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 TSTD3H0UI37 97 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 M0R378 163 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 PRYO14603 147 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 NDUFC2O95298 119 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 UBE2BP63146 152 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 SCXQ7RTU7 201 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 FAM19A5Q7Z5A7 132 aaPredicted RBP3.76□□□□□ -1.81
NUP98-208ENST00000461047 CIRBP-AS1Q8TBR5 109 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 SPANXDQ9BXN6 97 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 PPDPFQ9H3Y8 114 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 SPANXB1Q9NS25 103 aaPredicted RBP3.76□□□□□ -1.81
NUP98-208ENST00000461047 SPANXCQ9NY87 97 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 HIGD1BQ9P298 99 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 UQCR10Q9UDW1 63 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 TP73-AS1Q9UF72 201 aa3.76□□□□□ -1.81
NUP98-208ENST00000461047 LOC107984156A0A0G2JMH3 177 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 M0QXV9 152 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 TAL2Q16559 108 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 S100A7L2Q5SY68 101 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 C9orf129Q5T035 196 aaKnown RBP3.75□□□□□ -1.81
NUP98-208ENST00000461047 ADAMTSL4-AS1Q5T5F5 129 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 MRPL55Q7Z7F7 128 aaKnown RBP3.75□□□□□ -1.81
NUP98-208ENST00000461047 ARL17AQ8IVW1 177 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 DAND5Q8N907 189 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 LINC00308Q8TCZ7 52 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 TTTY13Q9BZ97 58 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 C22orf24Q9Y442 160 aa3.75□□□□□ -1.81
NUP98-208ENST00000461047 IGLV5-37A0A075B6J1 123 aa3.74□□□□□ -1.81
NUP98-208ENST00000461047 TRBV10-2A0A0K0K1G8 114 aa3.74□□□□□ -1.81
NUP98-208ENST00000461047 A0A1W2PNN7 141 aa3.74□□□□□ -1.81
NUP98-208ENST00000461047 HINT1P49773 126 aaPredicted RBP3.74□□□□□ -1.81
NUP98-208ENST00000461047 HNRNPA3P51991 378 aaKnown RBP3.74□□□□□ -1.81
NUP98-208ENST00000461047 NPC2P61916 151 aa3.74□□□□□ -1.81
NUP98-208ENST00000461047 C12orf57Q99622 126 aa3.74□□□□□ -1.81
NUP98-208ENST00000461047 VPS13DQ5THJ4 4388 aa3.74□□□□□ -1.81
NUP98-208ENST00000461047 TRAV13-2A0A0B4J235 113 aa3.73□□□□□ -1.81
NUP98-208ENST00000461047 FAM168BA1KXE4 195 aa3.73□□□□□ -1.81
NUP98-208ENST00000461047 EPM2AB3EWF7 344 aa3.73□□□□□ -1.81
NUP98-208ENST00000461047 VPREB1P12018 145 aa3.73□□□□□ -1.81
NUP98-208ENST00000461047 XGP55808 180 aa3.73□□□□□ -1.81
NUP98-208ENST00000461047 SERTAD4-AS1Q5TG53 156 aa3.73□□□□□ -1.81
NUP98-208ENST00000461047 MUSTN1Q8IVN3 82 aa3.73□□□□□ -1.81
NUP98-208ENST00000461047 OR13C6PQ8NH95 151 aa3.73□□□□□ -1.81
NUP98-208ENST00000461047 LITAFQ99732 161 aa3.73□□□□□ -1.81
NUP98-208ENST00000461047 TMEM126AQ9H061 195 aa3.73□□□□□ -1.81
NUP98-208ENST00000461047 DNAH1Q9P2D7 4330 aa3.72□□□□□ -1.81
NUP98-208ENST00000461047 A6NDN8 102 aa3.72□□□□□ -1.81
NUP98-208ENST00000461047 GAGE10A6NGK3 116 aa3.72□□□□□ -1.81
NUP98-208ENST00000461047 PANO1I0J062 215 aa3.72□□□□□ -1.81
NUP98-208ENST00000461047 RPL37AP61513 92 aaKnown RBP3.72□□□□□ -1.81
NUP98-208ENST00000461047 HSD52Q0P140 79 aa3.72□□□□□ -1.81
NUP98-208ENST00000461047 PHF5AQ7RTV0 110 aaKnown RBP3.72□□□□□ -1.81
NUP98-208ENST00000461047 LINC00167Q96N53 147 aa3.72□□□□□ -1.81
NUP98-208ENST00000461047 PLECQ15149 4684 aaKnown RBP3.71□□□□□ -1.81
NUP98-208ENST00000461047 RPL37AP8A6NKH3 93 aa3.71□□□□□ -1.82
NUP98-208ENST00000461047 NCR3O14931 201 aa3.71□□□□□ -1.82
NUP98-208ENST00000461047 SNCGO76070 127 aa3.71□□□□□ -1.82
NUP98-208ENST00000461047 SMR3BP02814 79 aaPredicted RBP3.71□□□□□ -1.82
NUP98-208ENST00000461047 DDTP30046 118 aa3.71□□□□□ -1.82
NUP98-208ENST00000461047 REG3GQ6UW15 175 aa3.71□□□□□ -1.82
NUP98-208ENST00000461047 RAB37Q96AX2 223 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms