RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ZNF815PA8K554 130 aa8.64□□□□□ -1.03
PDLIM2-213ENST00000448520 SPATA45Q537H7 98 aa8.64□□□□□ -1.03
PDLIM2-213ENST00000448520 MYMXA0A1B0GTQ4 84 aa8.63□□□□□ -1.03
PDLIM2-213ENST00000448520 PFN2P35080 140 aa8.63□□□□□ -1.03
PDLIM2-213ENST00000448520 A0A096LNI7 61 aa8.62□□□□□ -1.03
PDLIM2-213ENST00000448520 RPL18AQ02543 176 aaKnown RBP8.62□□□□□ -1.03
PDLIM2-213ENST00000448520 GAGE2BQ13066 116 aa8.62□□□□□ -1.03
PDLIM2-213ENST00000448520 RNF151Q2KHN1 245 aa8.62□□□□□ -1.03
PDLIM2-213ENST00000448520 ERG28Q9UKR5 140 aa8.62□□□□□ -1.03
PDLIM2-213ENST00000448520 IGKV2-24A0A0C4DH68 120 aa8.61□□□□□ -1.03
PDLIM2-213ENST00000448520 A0A0J9YXY3 114 aa8.61□□□□□ -1.03
PDLIM2-213ENST00000448520 SMIM13P0DJ93 91 aa8.61□□□□□ -1.03
PDLIM2-213ENST00000448520 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
PDLIM2-213ENST00000448520 MEIG1Q5JSS6 88 aa8.61□□□□□ -1.03
PDLIM2-213ENST00000448520 Q6ZRP5 223 aa8.61□□□□□ -1.03
PDLIM2-213ENST00000448520 C14orf144Q96I85 54 aa8.61□□□□□ -1.03
PDLIM2-213ENST00000448520 LINC00474Q9P2X8 69 aa8.61□□□□□ -1.03
PDLIM2-213ENST00000448520 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
PDLIM2-213ENST00000448520 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
PDLIM2-213ENST00000448520 LOC107984640A0A0U1RRK4 108 aa8.6□□□□□ -1.03
PDLIM2-213ENST00000448520 HERV-K104P63124 156 aa8.6□□□□□ -1.03
PDLIM2-213ENST00000448520 NDUFC2-KCTD14E9PQ53 114 aa8.59□□□□□ -1.03
PDLIM2-213ENST00000448520 LINC00158P58513 81 aa8.59□□□□□ -1.03
PDLIM2-213ENST00000448520 DAND5Q8N907 189 aa8.59□□□□□ -1.03
PDLIM2-213ENST00000448520 LINC01600Q96MT4 127 aa8.59□□□□□ -1.03
PDLIM2-213ENST00000448520 XAGE1AQ9HD64 81 aa8.59□□□□□ -1.03
PDLIM2-213ENST00000448520 TLX1NBP0CAT3 122 aa8.58□□□□□ -1.04
PDLIM2-213ENST00000448520 COX8AP10176 69 aa8.58□□□□□ -1.04
PDLIM2-213ENST00000448520 PTTG1IPP53801 180 aa8.58□□□□□ -1.04
PDLIM2-213ENST00000448520 ADAMTSL4-AS1Q5T5F5 129 aa8.58□□□□□ -1.04
PDLIM2-213ENST00000448520 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
PDLIM2-213ENST00000448520 TNXBP22105 4242 aa8.57□□□□□ -1.04
PDLIM2-213ENST00000448520 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
PDLIM2-213ENST00000448520 LITAFQ99732 161 aa8.57□□□□□ -1.04
PDLIM2-213ENST00000448520 PRR3P79522 188 aaKnown RBP8.56□□□□□ -1.04
PDLIM2-213ENST00000448520 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
PDLIM2-213ENST00000448520 BOD1L2Q8IYS8 172 aa8.56□□□□□ -1.04
PDLIM2-213ENST00000448520 MIR7-3HGQ8N6C7 128 aa8.56□□□□□ -1.04
PDLIM2-213ENST00000448520 SND1-IT1Q9HBX3 110 aa8.56□□□□□ -1.04
PDLIM2-213ENST00000448520 FAM168BA1KXE4 195 aa8.55□□□□□ -1.04
PDLIM2-213ENST00000448520 EIF4EBP3O60516 100 aaPredicted RBP8.55□□□□□ -1.04
PDLIM2-213ENST00000448520 NPC2P61916 151 aa8.55□□□□□ -1.04
PDLIM2-213ENST00000448520 SPINK6Q6UWN8 80 aa8.55□□□□□ -1.04
PDLIM2-213ENST00000448520 PRO1933Q9H354 126 aa8.55□□□□□ -1.04
PDLIM2-213ENST00000448520 CTAG1AP78358 180 aa8.54□□□□□ -1.04
PDLIM2-213ENST00000448520 COX17Q14061 63 aa8.54□□□□□ -1.04
PDLIM2-213ENST00000448520 REG3GQ6UW15 175 aa8.54□□□□□ -1.04
PDLIM2-213ENST00000448520 A0A1W2PNN7 141 aa8.53□□□□□ -1.04
PDLIM2-213ENST00000448520 PCP4L1A6NKN8 68 aa8.53□□□□□ -1.04
PDLIM2-213ENST00000448520 SLC25A34Q6PIV7 304 aa8.53□□□□□ -1.04
PDLIM2-213ENST00000448520 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
PDLIM2-213ENST00000448520 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
PDLIM2-213ENST00000448520 Q8NDZ9 215 aa8.53□□□□□ -1.04
PDLIM2-213ENST00000448520 TIMM17BO60830 172 aa8.52□□□□□ -1.05
PDLIM2-213ENST00000448520 C2orf91Q6ZV80 131 aa8.52□□□□□ -1.05
PDLIM2-213ENST00000448520 LINC00587B1AMM8 73 aa8.51□□□□□ -1.05
PDLIM2-213ENST00000448520 DLEU1O43261 78 aa8.51□□□□□ -1.05
PDLIM2-213ENST00000448520 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
PDLIM2-213ENST00000448520 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
PDLIM2-213ENST00000448520 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
PDLIM2-213ENST00000448520 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
PDLIM2-213ENST00000448520 LRP2P98164 4655 aa8.48□□□□□ -1.05
PDLIM2-213ENST00000448520 LINC00308Q8TCZ7 52 aa8.48□□□□□ -1.05
PDLIM2-213ENST00000448520 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
PDLIM2-213ENST00000448520 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
PDLIM2-213ENST00000448520 VPREB1P12018 145 aa8.47□□□□□ -1.05
PDLIM2-213ENST00000448520 SPANXB1Q9NS25 103 aaPredicted RBP8.47□□□□□ -1.05
PDLIM2-213ENST00000448520 UQCR10Q9UDW1 63 aa8.47□□□□□ -1.05
PDLIM2-213ENST00000448520 PHF5AQ7RTV0 110 aaKnown RBP8.46□□□□□ -1.06
PDLIM2-213ENST00000448520 MUSTN1Q8IVN3 82 aa8.46□□□□□ -1.06
PDLIM2-213ENST00000448520 NCR3O14931 201 aa8.45□□□□□ -1.06
PDLIM2-213ENST00000448520 MIEN1Q9BRT3 115 aa8.45□□□□□ -1.06
PDLIM2-213ENST00000448520 HIGD1BQ9P298 99 aa8.45□□□□□ -1.06
PDLIM2-213ENST00000448520 LOC107984156A0A0G2JMH3 177 aa8.44□□□□□ -1.06
PDLIM2-213ENST00000448520 GAGE10A6NGK3 116 aa8.44□□□□□ -1.06
PDLIM2-213ENST00000448520 TSTD3H0UI37 97 aa8.44□□□□□ -1.06
PDLIM2-213ENST00000448520 M0QXV9 152 aa8.44□□□□□ -1.06
PDLIM2-213ENST00000448520 ARL17AQ8IVW1 177 aa8.44□□□□□ -1.06
PDLIM2-213ENST00000448520 HIST1H4GQ99525 98 aa8.44□□□□□ -1.06
PDLIM2-213ENST00000448520 KRTAP11-1Q8IUC1 163 aa8.43□□□□□ -1.06
PDLIM2-213ENST00000448520 C22orf24Q9Y442 160 aa8.43□□□□□ -1.06
PDLIM2-213ENST00000448520 IGLV5-37A0A075B6J1 123 aa8.42□□□□□ -1.06
PDLIM2-213ENST00000448520 IFITM1P13164 125 aa8.41□□□□□ -1.06
PDLIM2-213ENST00000448520 RPL24P83731 157 aaKnown RBP8.41□□□□□ -1.06
PDLIM2-213ENST00000448520 Q6ZVH6 145 aa8.41□□□□□ -1.06
PDLIM2-213ENST00000448520 NKAPP1Q8N9T2 125 aa8.41□□□□□ -1.06
PDLIM2-213ENST00000448520 IGKV2-28A0A075B6P5 120 aa8.4□□□□□ -1.06
PDLIM2-213ENST00000448520 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.06
PDLIM2-213ENST00000448520 IGKV2D-28P01615 120 aa8.4□□□□□ -1.06
PDLIM2-213ENST00000448520 MRPL55Q7Z7F7 128 aaKnown RBP8.4□□□□□ -1.06
PDLIM2-213ENST00000448520 LINC00167Q96N53 147 aa8.4□□□□□ -1.06
PDLIM2-213ENST00000448520 A4D1N5 150 aa8.39□□□□□ -1.07
PDLIM2-213ENST00000448520 LBHQ53QV2 105 aaPredicted RBP8.39□□□□□ -1.07
PDLIM2-213ENST00000448520 PSORS1C2Q9UIG4 136 aa8.39□□□□□ -1.07
PDLIM2-213ENST00000448520 NDUFC2O95298 119 aa8.38□□□□□ -1.07
PDLIM2-213ENST00000448520 DDTP30046 118 aa8.38□□□□□ -1.07
PDLIM2-213ENST00000448520 CEND1Q8N111 149 aa8.38□□□□□ -1.07
PDLIM2-213ENST00000448520 M0R378 163 aa8.37□□□□□ -1.07
PDLIM2-213ENST00000448520 FXYD2P54710 66 aa8.37□□□□□ -1.07
PDLIM2-213ENST00000448520 HSD52Q0P140 79 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms