RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 Q9HAA7 133 aa10.43□□□□□ -0.74
SNX13-204ENST00000444712 MGAM2Q2M2H8 2515 aa10.4□□□□□ -0.75
SNX13-204ENST00000444712 Q6ZRU5 148 aa10.4□□□□□ -0.75
SNX13-204ENST00000444712 S100A7L2Q5SY68 101 aa10.39□□□□□ -0.75
SNX13-204ENST00000444712 NDUFC2-KCTD14E9PQ53 114 aa10.38□□□□□ -0.75
SNX13-204ENST00000444712 DNAL4O96015 105 aa10.38□□□□□ -0.75
SNX13-204ENST00000444712 SYCNQ0VAF6 134 aa10.38□□□□□ -0.75
SNX13-204ENST00000444712 HUWE1Q7Z6Z7 4374 aaKnown RBP10.38□□□□□ -0.75
SNX13-204ENST00000444712 A0A1B0GX51 115 aa10.37□□□□□ -0.75
SNX13-204ENST00000444712 NCR3O14931 201 aa10.37□□□□□ -0.75
SNX13-204ENST00000444712 FAM218AQ96MZ4 157 aa10.37□□□□□ -0.75
SNX13-204ENST00000444712 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
SNX13-204ENST00000444712 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
SNX13-204ENST00000444712 APLNQ9ULZ1 77 aa10.36□□□□□ -0.75
SNX13-204ENST00000444712 NUPR2A6NF83 97 aa10.36□□□□□ -0.75
SNX13-204ENST00000444712 SNCGO76070 127 aa10.35□□□□□ -0.75
SNX13-204ENST00000444712 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
SNX13-204ENST00000444712 Q8NDZ9 215 aa10.33□□□□□ -0.76
SNX13-204ENST00000444712 USP17L23D6RBM5 183 aa10.33□□□□□ -0.76
SNX13-204ENST00000444712 IGLV6-57P01721 117 aa10.33□□□□□ -0.76
SNX13-204ENST00000444712 XAGE1AQ9HD64 81 aa10.33□□□□□ -0.76
SNX13-204ENST00000444712 A0A087WYN8 130 aa10.32□□□□□ -0.76
SNX13-204ENST00000444712 TEX49A0A1B0GTD5 131 aa10.32□□□□□ -0.76
SNX13-204ENST00000444712 TLX1NBP0CAT3 122 aa10.32□□□□□ -0.76
SNX13-204ENST00000444712 RPL18AQ02543 176 aaKnown RBP10.32□□□□□ -0.76
SNX13-204ENST00000444712 LECT2O14960 151 aa10.31□□□□□ -0.76
SNX13-204ENST00000444712 VPREB1P12018 145 aa10.29□□□□□ -0.76
SNX13-204ENST00000444712 KRTAP21-3Q3LHN1 58 aa10.29□□□□□ -0.76
SNX13-204ENST00000444712 C6orf99Q4VX62 202 aa10.29□□□□□ -0.76
SNX13-204ENST00000444712 M0R378 163 aa10.29□□□□□ -0.76
SNX13-204ENST00000444712 GAGE2EQ4V326 116 aa10.28□□□□□ -0.76
SNX13-204ENST00000444712 Q6ZRP5 223 aa10.28□□□□□ -0.76
SNX13-204ENST00000444712 GAGE2DQ9UEU5 116 aa10.28□□□□□ -0.76
SNX13-204ENST00000444712 ORMDL1Q9P0S3 153 aa10.28□□□□□ -0.76
SNX13-204ENST00000444712 TRAV23DV6A0A075B6W5 121 aa10.27□□□□□ -0.77
SNX13-204ENST00000444712 TTC32Q5I0X7 151 aa10.27□□□□□ -0.77
SNX13-204ENST00000444712 LINC00167Q96N53 147 aa10.27□□□□□ -0.77
SNX13-204ENST00000444712 TRBV10-3A0A0K0K1G6 114 aa10.26□□□□□ -0.77
SNX13-204ENST00000444712 INAFM2P0DMQ5 153 aa10.26□□□□□ -0.77
SNX13-204ENST00000444712 Q8N814 137 aa10.26□□□□□ -0.77
SNX13-204ENST00000444712 CASC10Q5T4H9 136 aa10.26□□□□□ -0.77
SNX13-204ENST00000444712 DIRC1Q969H9 104 aa10.26□□□□□ -0.77
SNX13-204ENST00000444712 SIGMAR1Q99720 223 aa10.25□□□□□ -0.77
SNX13-204ENST00000444712 PLA2G2DQ9UNK4 145 aa10.25□□□□□ -0.77
SNX13-204ENST00000444712 TRBV7-6A0A0J9YX20 115 aa10.24□□□□□ -0.77
SNX13-204ENST00000444712 FAM240AA0A1B0GVK7 77 aa10.24□□□□□ -0.77
SNX13-204ENST00000444712 PSCAO43653 123 aa10.24□□□□□ -0.77
SNX13-204ENST00000444712 LINC00575Q6W349 94 aa10.24□□□□□ -0.77
SNX13-204ENST00000444712 C14orf177Q52M58 125 aa10.23□□□□□ -0.77
SNX13-204ENST00000444712 NKAPP1Q8N9T2 125 aa10.23□□□□□ -0.77
SNX13-204ENST00000444712 DNAH9Q9NYC9 4486 aa10.23□□□□□ -0.77
SNX13-204ENST00000444712 C9orf129Q5T035 196 aaKnown RBP10.23□□□□□ -0.77
SNX13-204ENST00000444712 LOC107984640A0A0U1RRK4 108 aa10.22□□□□□ -0.77
SNX13-204ENST00000444712 H3BQ85 93 aa10.22□□□□□ -0.77
SNX13-204ENST00000444712 ZNF73O43830 326 aaPredicted RBP10.22□□□□□ -0.77
SNX13-204ENST00000444712 SLPIP03973 132 aa10.22□□□□□ -0.77
SNX13-204ENST00000444712 KRTAP1-5Q9BYS1 174 aa10.22□□□□□ -0.77
SNX13-204ENST00000444712 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
SNX13-204ENST00000444712 hADV29S1A0JD25 119 aa10.21□□□□□ -0.77
SNX13-204ENST00000444712 TMEM256-PLSCR3K7ERE1 68 aa10.21□□□□□ -0.77
SNX13-204ENST00000444712 ACYP1P07311 99 aa10.21□□□□□ -0.77
SNX13-204ENST00000444712 C22orf24Q9Y442 160 aa10.21□□□□□ -0.77
SNX13-204ENST00000444712 GHRHP01286 108 aa10.19□□□□□ -0.78
SNX13-204ENST00000444712 COX7BP24311 80 aa10.19□□□□□ -0.78
SNX13-204ENST00000444712 COL7A1Q02388 2944 aa10.19□□□□□ -0.78
SNX13-204ENST00000444712 STAB2Q8WWQ8 2551 aa10.19□□□□□ -0.78
SNX13-204ENST00000444712 IGLV5-37A0A075B6J1 123 aa10.19□□□□□ -0.78
SNX13-204ENST00000444712 NBDYA0A0U1RRE5 68 aa10.18□□□□□ -0.78
SNX13-204ENST00000444712 ELOF1P60002 83 aaKnown RBP10.18□□□□□ -0.78
SNX13-204ENST00000444712 CNBPP62633 177 aaKnown RBP10.18□□□□□ -0.78
SNX13-204ENST00000444712 OBSCN-AS1Q96MR7 158 aa10.17□□□□□ -0.78
SNX13-204ENST00000444712 JMJD7-PLA2G4BH0Y9G9 81 aa10.17□□□□□ -0.78
SNX13-204ENST00000444712 GAGE2BQ13066 116 aa10.16□□□□□ -0.78
SNX13-204ENST00000444712 PKIGQ9Y2B9 76 aa10.16□□□□□ -0.78
SNX13-204ENST00000444712 SCGB1A1P11684 91 aa10.15□□□□□ -0.78
SNX13-204ENST00000444712 KCNQ1DNQ9H478 68 aa10.15□□□□□ -0.78
SNX13-204ENST00000444712 SERTAD4-AS1Q5TG53 156 aa10.14□□□□□ -0.79
SNX13-204ENST00000444712 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.14□□□□□ -0.79
SNX13-204ENST00000444712 C7orf33Q8WU49 177 aa10.14□□□□□ -0.79
SNX13-204ENST00000444712 PCP4P48539 62 aa10.12□□□□□ -0.79
SNX13-204ENST00000444712 XGP55808 180 aa10.12□□□□□ -0.79
SNX13-204ENST00000444712 PRYO14603 147 aa10.12□□□□□ -0.79
SNX13-204ENST00000444712 DYNC2H1Q8NCM8 4307 aaKnown RBP10.12□□□□□ -0.79
SNX13-204ENST00000444712 DNAH1Q9P2D7 4330 aa10.11□□□□□ -0.79
SNX13-204ENST00000444712 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
SNX13-204ENST00000444712 Q6ZQY7 126 aa10.11□□□□□ -0.79
SNX13-204ENST00000444712 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
SNX13-204ENST00000444712 C14orf132Q9NPU4 83 aa10.1□□□□□ -0.79
SNX13-204ENST00000444712 GAGE2AQ6NT46 116 aa10.09□□□□□ -0.79
SNX13-204ENST00000444712 DNHD1Q96M86 4753 aa10.09□□□□□ -0.79
SNX13-204ENST00000444712 MT-ATP8P03928 68 aa10.09□□□□□ -0.79
SNX13-204ENST00000444712 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
SNX13-204ENST00000444712 IGLV1-50A0A075B6I6 118 aa10.08□□□□□ -0.8
SNX13-204ENST00000444712 FAM168BA1KXE4 195 aa10.07□□□□□ -0.8
SNX13-204ENST00000444712 FAM19A5Q7Z5A7 132 aaPredicted RBP10.07□□□□□ -0.8
SNX13-204ENST00000444712 LRCOL1A6NCL2 159 aa10.06□□□□□ -0.8
SNX13-204ENST00000444712 Q6ZRN7 208 aaPredicted RBP10.06□□□□□ -0.8
SNX13-204ENST00000444712 LAMTOR3Q9UHA4 124 aa10.06□□□□□ -0.8
SNX13-204ENST00000444712 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.05□□□□□ -0.8
SNX13-204ENST00000444712 SPRR1AP35321 89 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms