RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 Q9HAA7 133 aa7.8□□□□□ -1.16
SMAD3-202ENST00000439724 PRR3P79522 188 aaKnown RBP7.79□□□□□ -1.16
SMAD3-202ENST00000439724 Q6ZRU5 148 aa7.79□□□□□ -1.16
SMAD3-202ENST00000439724 RMI2Q96E14 147 aa7.79□□□□□ -1.16
SMAD3-202ENST00000439724 HUWE1Q7Z6Z7 4374 aaKnown RBP7.78□□□□□ -1.16
SMAD3-202ENST00000439724 NCR3O14931 201 aa7.78□□□□□ -1.16
SMAD3-202ENST00000439724 NHLRC4P0CG21 123 aaPredicted RBP7.78□□□□□ -1.16
SMAD3-202ENST00000439724 SYCNQ0VAF6 134 aa7.77□□□□□ -1.17
SMAD3-202ENST00000439724 APLNQ9ULZ1 77 aa7.77□□□□□ -1.17
SMAD3-202ENST00000439724 A0A087WYN8 130 aa7.76□□□□□ -1.17
SMAD3-202ENST00000439724 NDUFC2-KCTD14E9PQ53 114 aa7.76□□□□□ -1.17
SMAD3-202ENST00000439724 S100A7L2Q5SY68 101 aa7.76□□□□□ -1.17
SMAD3-202ENST00000439724 TEX49A0A1B0GTD5 131 aa7.75□□□□□ -1.17
SMAD3-202ENST00000439724 IGLV6-57P01721 117 aa7.75□□□□□ -1.17
SMAD3-202ENST00000439724 XAGE1AQ9HD64 81 aa7.75□□□□□ -1.17
SMAD3-202ENST00000439724 A0A1B0GX51 115 aa7.74□□□□□ -1.17
SMAD3-202ENST00000439724 USP17L23D6RBM5 183 aa7.74□□□□□ -1.17
SMAD3-202ENST00000439724 DNAL4O96015 105 aa7.74□□□□□ -1.17
SMAD3-202ENST00000439724 BAALC-AS2P0C853 105 aa7.74□□□□□ -1.17
SMAD3-202ENST00000439724 RPL18AQ02543 176 aaKnown RBP7.73□□□□□ -1.17
SMAD3-202ENST00000439724 LECT2O14960 151 aa7.73□□□□□ -1.17
SMAD3-202ENST00000439724 VPREB1P12018 145 aa7.73□□□□□ -1.17
SMAD3-202ENST00000439724 CASC10Q5T4H9 136 aa7.73□□□□□ -1.17
SMAD3-202ENST00000439724 NUPR2A6NF83 97 aa7.72□□□□□ -1.17
SMAD3-202ENST00000439724 TLX1NBP0CAT3 122 aa7.72□□□□□ -1.17
SMAD3-202ENST00000439724 C6orf99Q4VX62 202 aa7.72□□□□□ -1.17
SMAD3-202ENST00000439724 UBE2DNLQ8IWF7 75 aa7.72□□□□□ -1.17
SMAD3-202ENST00000439724 LINC00167Q96N53 147 aa7.72□□□□□ -1.17
SMAD3-202ENST00000439724 C22orf24Q9Y442 160 aa7.72□□□□□ -1.17
SMAD3-202ENST00000439724 Q6ZRP5 223 aa7.71□□□□□ -1.18
SMAD3-202ENST00000439724 CDIP1Q9H305 208 aa7.71□□□□□ -1.18
SMAD3-202ENST00000439724 TRBV10-3A0A0K0K1G6 114 aa7.7□□□□□ -1.18
SMAD3-202ENST00000439724 KRTAP1-5Q9BYS1 174 aa7.7□□□□□ -1.18
SMAD3-202ENST00000439724 M0R378 163 aa7.69□□□□□ -1.18
SMAD3-202ENST00000439724 SLPIP03973 132 aa7.69□□□□□ -1.18
SMAD3-202ENST00000439724 GAGE2EQ4V326 116 aa7.69□□□□□ -1.18
SMAD3-202ENST00000439724 Q8N814 137 aa7.69□□□□□ -1.18
SMAD3-202ENST00000439724 GAGE2DQ9UEU5 116 aa7.69□□□□□ -1.18
SMAD3-202ENST00000439724 TRAV23DV6A0A075B6W5 121 aa7.68□□□□□ -1.18
SMAD3-202ENST00000439724 C9orf129Q5T035 196 aaKnown RBP7.68□□□□□ -1.18
SMAD3-202ENST00000439724 ORMDL1Q9P0S3 153 aa7.68□□□□□ -1.18
SMAD3-202ENST00000439724 FAM240AA0A1B0GVK7 77 aa7.68□□□□□ -1.18
SMAD3-202ENST00000439724 LINC00575Q6W349 94 aa7.68□□□□□ -1.18
SMAD3-202ENST00000439724 SIGMAR1Q99720 223 aa7.68□□□□□ -1.18
SMAD3-202ENST00000439724 SNCGO76070 127 aa7.67□□□□□ -1.18
SMAD3-202ENST00000439724 INAFM2P0DMQ5 153 aa7.67□□□□□ -1.18
SMAD3-202ENST00000439724 DIRC1Q969H9 104 aa7.67□□□□□ -1.18
SMAD3-202ENST00000439724 PLA2G2DQ9UNK4 145 aa7.67□□□□□ -1.18
SMAD3-202ENST00000439724 DNAH9Q9NYC9 4486 aa7.66□□□□□ -1.18
SMAD3-202ENST00000439724 STAB2Q8WWQ8 2551 aa7.66□□□□□ -1.18
SMAD3-202ENST00000439724 TRBV7-6A0A0J9YX20 115 aa7.66□□□□□ -1.18
SMAD3-202ENST00000439724 ZNF73O43830 326 aaPredicted RBP7.65□□□□□ -1.18
SMAD3-202ENST00000439724 OBSCN-AS1Q96MR7 158 aa7.65□□□□□ -1.18
SMAD3-202ENST00000439724 TTC32Q5I0X7 151 aa7.64□□□□□ -1.19
SMAD3-202ENST00000439724 IGLV5-37A0A075B6J1 123 aa7.63□□□□□ -1.19
SMAD3-202ENST00000439724 LOC107984640A0A0U1RRK4 108 aa7.63□□□□□ -1.19
SMAD3-202ENST00000439724 hADV29S1A0JD25 119 aa7.63□□□□□ -1.19
SMAD3-202ENST00000439724 ACYP1P07311 99 aa7.62□□□□□ -1.19
SMAD3-202ENST00000439724 COX7BP24311 80 aa7.62□□□□□ -1.19
SMAD3-202ENST00000439724 XGP55808 180 aa7.62□□□□□ -1.19
SMAD3-202ENST00000439724 ELOF1P60002 83 aaKnown RBP7.62□□□□□ -1.19
SMAD3-202ENST00000439724 SERTAD4-AS1Q5TG53 156 aa7.62□□□□□ -1.19
SMAD3-202ENST00000439724 NKAPP1Q8N9T2 125 aa7.62□□□□□ -1.19
SMAD3-202ENST00000439724 TMEM256-PLSCR3K7ERE1 68 aa7.62□□□□□ -1.19
SMAD3-202ENST00000439724 PSCAO43653 123 aa7.62□□□□□ -1.19
SMAD3-202ENST00000439724 PCP4P48539 62 aa7.62□□□□□ -1.19
SMAD3-202ENST00000439724 CNBPP62633 177 aaKnown RBP7.62□□□□□ -1.19
SMAD3-202ENST00000439724 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
SMAD3-202ENST00000439724 COL7A1Q02388 2944 aa7.61□□□□□ -1.19
SMAD3-202ENST00000439724 NBDYA0A0U1RRE5 68 aa7.61□□□□□ -1.19
SMAD3-202ENST00000439724 SCGB1A1P11684 91 aa7.61□□□□□ -1.19
SMAD3-202ENST00000439724 C14orf177Q52M58 125 aa7.61□□□□□ -1.19
SMAD3-202ENST00000439724 C7orf33Q8WU49 177 aa7.61□□□□□ -1.19
SMAD3-202ENST00000439724 H3BQ85 93 aa7.6□□□□□ -1.19
SMAD3-202ENST00000439724 MT-ATP8P03928 68 aa7.6□□□□□ -1.19
SMAD3-202ENST00000439724 KCNQ1DNQ9H478 68 aa7.6□□□□□ -1.19
SMAD3-202ENST00000439724 JMJD7-PLA2G4BH0Y9G9 81 aa7.59□□□□□ -1.19
SMAD3-202ENST00000439724 GAGE2BQ13066 116 aa7.59□□□□□ -1.19
SMAD3-202ENST00000439724 DYNC2H1Q8NCM8 4307 aaKnown RBP7.58□□□□□ -1.2
SMAD3-202ENST00000439724 DNAH1Q9P2D7 4330 aa7.58□□□□□ -1.2
SMAD3-202ENST00000439724 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.58□□□□□ -1.2
SMAD3-202ENST00000439724 LINC00528Q8N1L1 170 aa7.58□□□□□ -1.2
SMAD3-202ENST00000439724 C14orf132Q9NPU4 83 aa7.58□□□□□ -1.2
SMAD3-202ENST00000439724 Q6ZQY7 126 aa7.57□□□□□ -1.2
SMAD3-202ENST00000439724 KRTAP7-1Q8IUC3 87 aa7.57□□□□□ -1.2
SMAD3-202ENST00000439724 FAM168BA1KXE4 195 aa7.57□□□□□ -1.2
SMAD3-202ENST00000439724 PRYO14603 147 aa7.57□□□□□ -1.2
SMAD3-202ENST00000439724 Q6ZRN7 208 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-202ENST00000439724 GHRHP01286 108 aa7.56□□□□□ -1.2
SMAD3-202ENST00000439724 SDIM1Q6ZPB5 146 aa7.56□□□□□ -1.2
SMAD3-202ENST00000439724 IGLV1-50A0A075B6I6 118 aa7.55□□□□□ -1.2
SMAD3-202ENST00000439724 LRCOL1A6NCL2 159 aa7.55□□□□□ -1.2
SMAD3-202ENST00000439724 C16orf90A8MZG2 172 aa7.55□□□□□ -1.2
SMAD3-202ENST00000439724 GAGE2AQ6NT46 116 aa7.55□□□□□ -1.2
SMAD3-202ENST00000439724 A0A096LNI7 61 aa7.54□□□□□ -1.2
SMAD3-202ENST00000439724 SPRR1AP35321 89 aa7.54□□□□□ -1.2
SMAD3-202ENST00000439724 MRPL55Q7Z7F7 128 aaKnown RBP7.54□□□□□ -1.2
SMAD3-202ENST00000439724 FAM19A5Q7Z5A7 132 aaPredicted RBP7.53□□□□□ -1.2
SMAD3-202ENST00000439724 PKIGQ9Y2B9 76 aa7.53□□□□□ -1.2
SMAD3-202ENST00000439724 KRTAP4-16G5E9R7 235 aaPredicted RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms