RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 SFTA2Q6UW10 78 aa11.39□□□□□ -0.59
HLA-F-220ENST00000434407 PMCHL2Q9BQD1 86 aa11.39□□□□□ -0.59
HLA-F-220ENST00000434407 PLNP26678 52 aa11.38□□□□□ -0.59
HLA-F-220ENST00000434407 FAM19A5Q7Z5A7 132 aaPredicted RBP11.38□□□□□ -0.59
HLA-F-220ENST00000434407 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
HLA-F-220ENST00000434407 ATOH7Q8N100 152 aa11.37□□□□□ -0.59
HLA-F-220ENST00000434407 KRTAP29-1A8MX34 341 aaPredicted RBP11.35□□□□□ -0.59
HLA-F-220ENST00000434407 M0QXV9 152 aa11.35□□□□□ -0.59
HLA-F-220ENST00000434407 DPM2O94777 84 aa11.35□□□□□ -0.59
HLA-F-220ENST00000434407 COX17Q14061 63 aa11.35□□□□□ -0.59
HLA-F-220ENST00000434407 SERTAD4-AS1Q5TG53 156 aa11.35□□□□□ -0.59
HLA-F-220ENST00000434407 VAMP8Q9BV40 100 aa11.35□□□□□ -0.59
HLA-F-220ENST00000434407 PSORS1C2Q9UIG4 136 aa11.35□□□□□ -0.59
HLA-F-220ENST00000434407 PLA2G2DQ9UNK4 145 aa11.35□□□□□ -0.59
HLA-F-220ENST00000434407 IGKCP01834 107 aa11.34□□□□□ -0.59
HLA-F-220ENST00000434407 KRTAP11-1Q8IUC1 163 aa11.34□□□□□ -0.59
HLA-F-220ENST00000434407 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
HLA-F-220ENST00000434407 HSBP1L1C9JCN9 74 aa11.33□□□□□ -0.6
HLA-F-220ENST00000434407 TP73-AS1Q9UF72 201 aa11.33□□□□□ -0.6
HLA-F-220ENST00000434407 PFN2P35080 140 aa11.32□□□□□ -0.6
HLA-F-220ENST00000434407 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
HLA-F-220ENST00000434407 C22orf24Q9Y442 160 aa11.32□□□□□ -0.6
HLA-F-220ENST00000434407 OXTP01178 125 aa11.31□□□□□ -0.6
HLA-F-220ENST00000434407 PAM16Q9Y3D7 125 aa11.31□□□□□ -0.6
HLA-F-220ENST00000434407 IGLV5-37A0A075B6J1 123 aa11.3□□□□□ -0.6
HLA-F-220ENST00000434407 LEPROTO15243 131 aa11.3□□□□□ -0.6
HLA-F-220ENST00000434407 SPATA45Q537H7 98 aa11.3□□□□□ -0.6
HLA-F-220ENST00000434407 KRTAP4-8Q9BYQ9 185 aa11.3□□□□□ -0.6
HLA-F-220ENST00000434407 HERC1Q15751 4861 aa11.29□□□□□ -0.6
HLA-F-220ENST00000434407 TSPEAR-AS2P59090 65 aa11.29□□□□□ -0.6
HLA-F-220ENST00000434407 PLEKHB2Q96CS7 222 aa11.29□□□□□ -0.6
HLA-F-220ENST00000434407 SND1-IT1Q9HBX3 110 aa11.29□□□□□ -0.6
HLA-F-220ENST00000434407 NDUFA12Q9UI09 145 aa11.29□□□□□ -0.6
HLA-F-220ENST00000434407 HERV-K104P63124 156 aa11.28□□□□□ -0.6
HLA-F-220ENST00000434407 SPINK6Q6UWN8 80 aa11.28□□□□□ -0.6
HLA-F-220ENST00000434407 HERVK_113P61574 105 aa11.27□□□□□ -0.61
HLA-F-220ENST00000434407 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
HLA-F-220ENST00000434407 C1orf137Q5JT78 98 aa11.27□□□□□ -0.61
HLA-F-220ENST00000434407 MYMXA0A1B0GTQ4 84 aa11.26□□□□□ -0.61
HLA-F-220ENST00000434407 UBE2BP63146 152 aa11.26□□□□□ -0.61
HLA-F-220ENST00000434407 MRPL55Q7Z7F7 128 aaKnown RBP11.26□□□□□ -0.61
HLA-F-220ENST00000434407 J3QQQ9 107 aa11.25□□□□□ -0.61
HLA-F-220ENST00000434407 PRO1933Q9H354 126 aa11.25□□□□□ -0.61
HLA-F-220ENST00000434407 TSTD3H0UI37 97 aa11.24□□□□□ -0.61
HLA-F-220ENST00000434407 LINC00158P58513 81 aa11.24□□□□□ -0.61
HLA-F-220ENST00000434407 LINC00587B1AMM8 73 aa11.23□□□□□ -0.61
HLA-F-220ENST00000434407 E9PLD3 99 aa11.23□□□□□ -0.61
HLA-F-220ENST00000434407 IGLV7-43P04211 117 aa11.23□□□□□ -0.61
HLA-F-220ENST00000434407 SMIM13P0DJ93 91 aa11.23□□□□□ -0.61
HLA-F-220ENST00000434407 VPREB1P12018 145 aa11.23□□□□□ -0.61
HLA-F-220ENST00000434407 NMUP48645 174 aa11.23□□□□□ -0.61
HLA-F-220ENST00000434407 ANKRD39Q53RE8 183 aa11.23□□□□□ -0.61
HLA-F-220ENST00000434407 LINC00167Q96N53 147 aa11.23□□□□□ -0.61
HLA-F-220ENST00000434407 TNXBP22105 4242 aa11.21□□□□□ -0.61
HLA-F-220ENST00000434407 MEIG1Q5JSS6 88 aa11.21□□□□□ -0.61
HLA-F-220ENST00000434407 NKAPP1Q8N9T2 125 aa11.21□□□□□ -0.61
HLA-F-220ENST00000434407 Q8NDZ9 215 aa11.21□□□□□ -0.61
HLA-F-220ENST00000434407 A0A0U1RRA0 63 aa11.2□□□□□ -0.62
HLA-F-220ENST00000434407 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
HLA-F-220ENST00000434407 RPL24P83731 157 aaKnown RBP11.2□□□□□ -0.62
HLA-F-220ENST00000434407 C14orf144Q96I85 54 aa11.2□□□□□ -0.62
HLA-F-220ENST00000434407 PCP4L1A6NKN8 68 aa11.19□□□□□ -0.62
HLA-F-220ENST00000434407 MT1HL1P0DM35 61 aa11.19□□□□□ -0.62
HLA-F-220ENST00000434407 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
HLA-F-220ENST00000434407 MIEN1Q9BRT3 115 aa11.18□□□□□ -0.62
HLA-F-220ENST00000434407 UQCR10Q9UDW1 63 aa11.18□□□□□ -0.62
HLA-F-220ENST00000434407 LOC107984156A0A0G2JMH3 177 aa11.17□□□□□ -0.62
HLA-F-220ENST00000434407 RPL37AP8A6NKH3 93 aa11.17□□□□□ -0.62
HLA-F-220ENST00000434407 COX8AP10176 69 aa11.17□□□□□ -0.62
HLA-F-220ENST00000434407 ARL17AQ8IVW1 177 aa11.17□□□□□ -0.62
HLA-F-220ENST00000434407 LINC01600Q96MT4 127 aa11.17□□□□□ -0.62
HLA-F-220ENST00000434407 GAGE10A6NGK3 116 aa11.16□□□□□ -0.62
HLA-F-220ENST00000434407 SLC25A34Q6PIV7 304 aa11.16□□□□□ -0.62
HLA-F-220ENST00000434407 REG3GQ6UW15 175 aa11.16□□□□□ -0.62
HLA-F-220ENST00000434407 IGKV2D-26A0A0A0MRZ7 120 aa11.15□□□□□ -0.62
HLA-F-220ENST00000434407 DIRC1Q969H9 104 aa11.15□□□□□ -0.62
HLA-F-220ENST00000434407 IGLV1-50A0A075B6I6 118 aa11.14□□□□□ -0.63
HLA-F-220ENST00000434407 BCE1O60756 84 aa11.14□□□□□ -0.63
HLA-F-220ENST00000434407 A0A0J9YXY3 114 aa11.13□□□□□ -0.63
HLA-F-220ENST00000434407 H0Y9J4 135 aa11.13□□□□□ -0.63
HLA-F-220ENST00000434407 DLEU1O43261 78 aa11.13□□□□□ -0.63
HLA-F-220ENST00000434407 ZNF861PO60384 105 aa11.13□□□□□ -0.63
HLA-F-220ENST00000434407 PCP2Q8IVA1 136 aa11.13□□□□□ -0.63
HLA-F-220ENST00000434407 BOD1L2Q8IYS8 172 aa11.13□□□□□ -0.63
HLA-F-220ENST00000434407 DDTP30046 118 aa11.12□□□□□ -0.63
HLA-F-220ENST00000434407 IGKV2-28A0A075B6P5 120 aa11.11□□□□□ -0.63
HLA-F-220ENST00000434407 M0R378 163 aa11.11□□□□□ -0.63
HLA-F-220ENST00000434407 IGKV2D-28P01615 120 aa11.11□□□□□ -0.63
HLA-F-220ENST00000434407 DAND5Q8N907 189 aa11.11□□□□□ -0.63
HLA-F-220ENST00000434407 KRTAP10-8P60410 259 aa11.09□□□□□ -0.63
HLA-F-220ENST00000434407 ADAMTSL4-AS1Q5T5F5 129 aa11.09□□□□□ -0.63
HLA-F-220ENST00000434407 KRTAP13-1Q8IUC0 172 aa11.09□□□□□ -0.63
HLA-F-220ENST00000434407 TTTY13Q9BZ97 58 aa11.09□□□□□ -0.63
HLA-F-220ENST00000434407 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.08□□□□□ -0.64
HLA-F-220ENST00000434407 LITAFQ99732 161 aa11.08□□□□□ -0.64
HLA-F-220ENST00000434407 KRTAP9-2Q9BYQ4 174 aa11.08□□□□□ -0.64
HLA-F-220ENST00000434407 ZNF815PA8K554 130 aa11.07□□□□□ -0.64
HLA-F-220ENST00000434407 TIMM17BO60830 172 aa11.07□□□□□ -0.64
HLA-F-220ENST00000434407 RPL28P46779 137 aaKnown RBP11.07□□□□□ -0.64
HLA-F-220ENST00000434407 TMEM126AQ9H061 195 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 247.8 ms