RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ZNF561-AS1K7EIQ3 104 aa8.61□□□□□ -1.03
DDX56-204ENST00000431640 C6orf223Q8N319 242 aa8.61□□□□□ -1.03
DDX56-204ENST00000431640 C9orf116Q5BN46 136 aaPredicted RBP8.61□□□□□ -1.03
DDX56-204ENST00000431640 DNAH7Q8WXX0 4024 aa8.6□□□□□ -1.03
DDX56-204ENST00000431640 CSMD3Q7Z407 3707 aa8.6□□□□□ -1.03
DDX56-204ENST00000431640 FAM240AA0A1B0GVK7 77 aa8.6□□□□□ -1.03
DDX56-204ENST00000431640 SNCGO76070 127 aa8.6□□□□□ -1.03
DDX56-204ENST00000431640 C10orf25Q5T742 122 aa8.6□□□□□ -1.03
DDX56-204ENST00000431640 ACYP1P07311 99 aa8.59□□□□□ -1.03
DDX56-204ENST00000431640 NHLRC4P0CG21 123 aaPredicted RBP8.59□□□□□ -1.03
DDX56-204ENST00000431640 KRTAP26-1Q6PEX3 210 aa8.59□□□□□ -1.03
DDX56-204ENST00000431640 C2orf48Q96LS8 159 aa8.59□□□□□ -1.03
DDX56-204ENST00000431640 C1orf43Q9BWL3 253 aa8.59□□□□□ -1.03
DDX56-204ENST00000431640 S100A7L2Q5SY68 101 aa8.58□□□□□ -1.04
DDX56-204ENST00000431640 A0A087WYN8 130 aa8.57□□□□□ -1.04
DDX56-204ENST00000431640 DNAH10OSP0CZ25 163 aa8.57□□□□□ -1.04
DDX56-204ENST00000431640 INAFM2P0DMQ5 153 aa8.57□□□□□ -1.04
DDX56-204ENST00000431640 TGP01266 2768 aa8.57□□□□□ -1.04
DDX56-204ENST00000431640 PRR3P79522 188 aaKnown RBP8.56□□□□□ -1.04
DDX56-204ENST00000431640 C21orf62-AS1Q17RA5 79 aa8.56□□□□□ -1.04
DDX56-204ENST00000431640 CAMK2N2Q96S95 79 aa8.56□□□□□ -1.04
DDX56-204ENST00000431640 Q9HAA7 133 aa8.56□□□□□ -1.04
DDX56-204ENST00000431640 C6orf48Q9UBA6 75 aa8.56□□□□□ -1.04
DDX56-204ENST00000431640 LECT2O14960 151 aa8.56□□□□□ -1.04
DDX56-204ENST00000431640 XGP55808 180 aa8.56□□□□□ -1.04
DDX56-204ENST00000431640 LINC00526Q96FQ7 95 aa8.56□□□□□ -1.04
DDX56-204ENST00000431640 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
DDX56-204ENST00000431640 MT-ATP8P03928 68 aa8.54□□□□□ -1.04
DDX56-204ENST00000431640 ORMDL1Q9P0S3 153 aa8.54□□□□□ -1.04
DDX56-204ENST00000431640 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
DDX56-204ENST00000431640 NCR3O14931 201 aa8.53□□□□□ -1.04
DDX56-204ENST00000431640 LINC00167Q96N53 147 aa8.53□□□□□ -1.04
DDX56-204ENST00000431640 C22orf24Q9Y442 160 aa8.53□□□□□ -1.04
DDX56-204ENST00000431640 HIGD2BQ4VC39 106 aa8.52□□□□□ -1.04
DDX56-204ENST00000431640 Q8N814 137 aa8.52□□□□□ -1.04
DDX56-204ENST00000431640 C15orf56Q8N910 161 aa8.52□□□□□ -1.04
DDX56-204ENST00000431640 DYNC2H1Q8NCM8 4307 aaKnown RBP8.52□□□□□ -1.05
DDX56-204ENST00000431640 IGLV6-57P01721 117 aa8.52□□□□□ -1.05
DDX56-204ENST00000431640 NDUFC2-KCTD14E9PQ53 114 aa8.51□□□□□ -1.05
DDX56-204ENST00000431640 RMI2Q96E14 147 aa8.51□□□□□ -1.05
DDX56-204ENST00000431640 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
DDX56-204ENST00000431640 TMEM256-PLSCR3K7ERE1 68 aa8.5□□□□□ -1.05
DDX56-204ENST00000431640 C6orf99Q4VX62 202 aa8.5□□□□□ -1.05
DDX56-204ENST00000431640 Q6ZRU5 148 aa8.5□□□□□ -1.05
DDX56-204ENST00000431640 Q8NDZ9 215 aa8.5□□□□□ -1.05
DDX56-204ENST00000431640 LYSTQ99698 3801 aa8.5□□□□□ -1.05
DDX56-204ENST00000431640 H3BQ85 93 aa8.49□□□□□ -1.05
DDX56-204ENST00000431640 RPL18AQ02543 176 aaKnown RBP8.49□□□□□ -1.05
DDX56-204ENST00000431640 OBSCN-AS1Q96MR7 158 aa8.49□□□□□ -1.05
DDX56-204ENST00000431640 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
DDX56-204ENST00000431640 Q6Q795 121 aa8.48□□□□□ -1.05
DDX56-204ENST00000431640 LINC00575Q6W349 94 aa8.48□□□□□ -1.05
DDX56-204ENST00000431640 UPK3BQ9BT76 320 aa8.48□□□□□ -1.05
DDX56-204ENST00000431640 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
DDX56-204ENST00000431640 M0R378 163 aa8.48□□□□□ -1.05
DDX56-204ENST00000431640 GAGE2BQ13066 116 aa8.48□□□□□ -1.05
DDX56-204ENST00000431640 GAGE2EQ4V326 116 aa8.48□□□□□ -1.05
DDX56-204ENST00000431640 XAGE1AQ9HD64 81 aa8.48□□□□□ -1.05
DDX56-204ENST00000431640 GAGE2DQ9UEU5 116 aa8.48□□□□□ -1.05
DDX56-204ENST00000431640 TRBV7-6A0A0J9YX20 115 aa8.47□□□□□ -1.05
DDX56-204ENST00000431640 SLPIP03973 132 aa8.47□□□□□ -1.05
DDX56-204ENST00000431640 TRAV23DV6A0A075B6W5 121 aa8.46□□□□□ -1.06
DDX56-204ENST00000431640 hADV29S1A0JD25 119 aa8.46□□□□□ -1.06
DDX56-204ENST00000431640 TRBV10-3A0A0K0K1G6 114 aa8.45□□□□□ -1.06
DDX56-204ENST00000431640 GHRHP01286 108 aa8.45□□□□□ -1.06
DDX56-204ENST00000431640 VPREB1P12018 145 aa8.45□□□□□ -1.06
DDX56-204ENST00000431640 PLECQ15149 4684 aaKnown RBP8.45□□□□□ -1.06
DDX56-204ENST00000431640 GAGE2AQ6NT46 116 aa8.44□□□□□ -1.06
DDX56-204ENST00000431640 LINC00643Q86TS7 51 aa8.44□□□□□ -1.06
DDX56-204ENST00000431640 DIRC1Q969H9 104 aa8.44□□□□□ -1.06
DDX56-204ENST00000431640 TLX1NBP0CAT3 122 aa8.44□□□□□ -1.06
DDX56-204ENST00000431640 SDIM1Q6ZPB5 146 aa8.44□□□□□ -1.06
DDX56-204ENST00000431640 A0A1B0GV72 72 aa8.43□□□□□ -1.06
DDX56-204ENST00000431640 ZNF73O43830 326 aaPredicted RBP8.43□□□□□ -1.06
DDX56-204ENST00000431640 IMUPQ9GZP8 106 aa8.43□□□□□ -1.06
DDX56-204ENST00000431640 COX7BP24311 80 aa8.42□□□□□ -1.06
DDX56-204ENST00000431640 TTC32Q5I0X7 151 aa8.42□□□□□ -1.06
DDX56-204ENST00000431640 Q6ZRP5 223 aa8.42□□□□□ -1.06
DDX56-204ENST00000431640 C14orf132Q9NPU4 83 aa8.42□□□□□ -1.06
DDX56-204ENST00000431640 TENM2Q9NT68 2774 aa8.41□□□□□ -1.06
DDX56-204ENST00000431640 TRBV7-7A0A0K0K1E9 115 aa8.4□□□□□ -1.06
DDX56-204ENST00000431640 USP17L23D6RBM5 183 aa8.4□□□□□ -1.06
DDX56-204ENST00000431640 APLNQ9ULZ1 77 aa8.4□□□□□ -1.06
DDX56-204ENST00000431640 PLA2G2DQ9UNK4 145 aa8.4□□□□□ -1.06
DDX56-204ENST00000431640 CCKP06307 115 aa8.39□□□□□ -1.07
DDX56-204ENST00000431640 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
DDX56-204ENST00000431640 WWC2-AS2Q96NR7 200 aa8.39□□□□□ -1.07
DDX56-204ENST00000431640 ELOF1P60002 83 aaKnown RBP8.39□□□□□ -1.07
DDX56-204ENST00000431640 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.39□□□□□ -1.07
DDX56-204ENST00000431640 NUPR2A6NF83 97 aa8.38□□□□□ -1.07
DDX56-204ENST00000431640 NKAPP1Q8N9T2 125 aa8.38□□□□□ -1.07
DDX56-204ENST00000431640 DNAH1Q9P2D7 4330 aa8.38□□□□□ -1.07
DDX56-204ENST00000431640 RBM3P98179 157 aaKnown RBP8.36□□□□□ -1.07
DDX56-204ENST00000431640 SMCR5Q8TEV8 140 aa8.36□□□□□ -1.07
DDX56-204ENST00000431640 Q6ZQY7 126 aa8.35□□□□□ -1.07
DDX56-204ENST00000431640 IGLV5-37A0A075B6J1 123 aa8.35□□□□□ -1.07
DDX56-204ENST00000431640 PDE6GP18545 87 aa8.35□□□□□ -1.07
DDX56-204ENST00000431640 NDUFV3P56181 108 aaKnown RBP8.35□□□□□ -1.07
DDX56-204ENST00000431640 UBE2DNLQ8IWF7 75 aa8.35□□□□□ -1.07
DDX56-204ENST00000431640 ANAPC13Q9BS18 74 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms