RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ACYP1P07311 99 aa9.13□□□□□ -0.95
LIMS1-205ENST00000410093 DNAH10OSP0CZ25 163 aa9.13□□□□□ -0.95
LIMS1-205ENST00000410093 DNAH9Q9NYC9 4486 aa9.13□□□□□ -0.95
LIMS1-205ENST00000410093 TEX49A0A1B0GTD5 131 aa9.12□□□□□ -0.95
LIMS1-205ENST00000410093 BAALC-AS2P0C853 105 aa9.12□□□□□ -0.95
LIMS1-205ENST00000410093 INAFM2P0DMQ5 153 aa9.12□□□□□ -0.95
LIMS1-205ENST00000410093 C1orf43Q9BWL3 253 aa9.12□□□□□ -0.95
LIMS1-205ENST00000410093 CDIP1Q9H305 208 aa9.11□□□□□ -0.95
LIMS1-205ENST00000410093 KRTAP26-1Q6PEX3 210 aa9.1□□□□□ -0.95
LIMS1-205ENST00000410093 UNQ6190/PRO20217Q6UXQ8 127 aa9.1□□□□□ -0.95
LIMS1-205ENST00000410093 FAM218AQ96MZ4 157 aa9.09□□□□□ -0.95
LIMS1-205ENST00000410093 H3BQ85 93 aa9.08□□□□□ -0.96
LIMS1-205ENST00000410093 S100A7L2Q5SY68 101 aa9.08□□□□□ -0.96
LIMS1-205ENST00000410093 RMI2Q96E14 147 aa9.08□□□□□ -0.96
LIMS1-205ENST00000410093 CAMK2N2Q96S95 79 aa9.08□□□□□ -0.96
LIMS1-205ENST00000410093 C10orf25Q5T742 122 aa9.07□□□□□ -0.96
LIMS1-205ENST00000410093 C6orf223Q8N319 242 aa9.07□□□□□ -0.96
LIMS1-205ENST00000410093 LINC00167Q96N53 147 aa9.07□□□□□ -0.96
LIMS1-205ENST00000410093 COL7A1Q02388 2944 aa9.07□□□□□ -0.96
LIMS1-205ENST00000410093 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
LIMS1-205ENST00000410093 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
LIMS1-205ENST00000410093 UPK3BQ9BT76 320 aa9.05□□□□□ -0.96
LIMS1-205ENST00000410093 ORMDL1Q9P0S3 153 aa9.05□□□□□ -0.96
LIMS1-205ENST00000410093 A0A087WYN8 130 aa9.05□□□□□ -0.96
LIMS1-205ENST00000410093 C3orf84H3BNL1 204 aa9.05□□□□□ -0.96
LIMS1-205ENST00000410093 NDUFC2-KCTD14E9PQ53 114 aa9.04□□□□□ -0.96
LIMS1-205ENST00000410093 LECT2O14960 151 aa9.04□□□□□ -0.96
LIMS1-205ENST00000410093 GHRHP01286 108 aa9.04□□□□□ -0.96
LIMS1-205ENST00000410093 IGLV6-57P01721 117 aa9.04□□□□□ -0.96
LIMS1-205ENST00000410093 C15orf56Q8N910 161 aa9.04□□□□□ -0.96
LIMS1-205ENST00000410093 IGKV2D-24A0A075B6R9 120 aa9.03□□□□□ -0.96
LIMS1-205ENST00000410093 TRBV7-6A0A0J9YX20 115 aa9.03□□□□□ -0.96
LIMS1-205ENST00000410093 Q8N814 137 aa9.03□□□□□ -0.96
LIMS1-205ENST00000410093 TMEM256-PLSCR3K7ERE1 68 aa9.02□□□□□ -0.97
LIMS1-205ENST00000410093 OBSCN-AS1Q96MR7 158 aa9.02□□□□□ -0.97
LIMS1-205ENST00000410093 XGP55808 180 aa9.01□□□□□ -0.97
LIMS1-205ENST00000410093 Q6Q795 121 aa9.01□□□□□ -0.97
LIMS1-205ENST00000410093 Q9HAA7 133 aa9.01□□□□□ -0.97
LIMS1-205ENST00000410093 HUWE1Q7Z6Z7 4374 aaKnown RBP9.01□□□□□ -0.97
LIMS1-205ENST00000410093 JMJD7-PLA2G4BH0Y9G9 81 aa9□□□□□ -0.97
LIMS1-205ENST00000410093 NCR3O14931 201 aa9□□□□□ -0.97
LIMS1-205ENST00000410093 LINC00588Q9Y4M8 146 aa9□□□□□ -0.97
LIMS1-205ENST00000410093 TLX1NBP0CAT3 122 aa9□□□□□ -0.97
LIMS1-205ENST00000410093 PRR3P79522 188 aaKnown RBP9□□□□□ -0.97
LIMS1-205ENST00000410093 SYCNQ0VAF6 134 aa9□□□□□ -0.97
LIMS1-205ENST00000410093 LINC00526Q96FQ7 95 aa9□□□□□ -0.97
LIMS1-205ENST00000410093 C22orf24Q9Y442 160 aa9□□□□□ -0.97
LIMS1-205ENST00000410093 M0R378 163 aa8.99□□□□□ -0.97
LIMS1-205ENST00000410093 MT-ATP8P03928 68 aa8.99□□□□□ -0.97
LIMS1-205ENST00000410093 HIGD2BQ4VC39 106 aa8.99□□□□□ -0.97
LIMS1-205ENST00000410093 C6orf99Q4VX62 202 aa8.99□□□□□ -0.97
LIMS1-205ENST00000410093 Q6ZRU5 148 aa8.99□□□□□ -0.97
LIMS1-205ENST00000410093 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
LIMS1-205ENST00000410093 TRAV23DV6A0A075B6W5 121 aa8.97□□□□□ -0.97
LIMS1-205ENST00000410093 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
LIMS1-205ENST00000410093 C21orf62-AS1Q17RA5 79 aa8.97□□□□□ -0.97
LIMS1-205ENST00000410093 DIRC1Q969H9 104 aa8.97□□□□□ -0.97
LIMS1-205ENST00000410093 TENM3Q9P273 2699 aa8.97□□□□□ -0.97
LIMS1-205ENST00000410093 CASC10Q5T4H9 136 aa8.96□□□□□ -0.97
LIMS1-205ENST00000410093 PLA2G2DQ9UNK4 145 aa8.96□□□□□ -0.97
LIMS1-205ENST00000410093 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
LIMS1-205ENST00000410093 VPREB1P12018 145 aa8.95□□□□□ -0.98
LIMS1-205ENST00000410093 GAGE2BQ13066 116 aa8.95□□□□□ -0.98
LIMS1-205ENST00000410093 GAGE2EQ4V326 116 aa8.95□□□□□ -0.98
LIMS1-205ENST00000410093 SDIM1Q6ZPB5 146 aa8.95□□□□□ -0.98
LIMS1-205ENST00000410093 Q8NDZ9 215 aa8.95□□□□□ -0.98
LIMS1-205ENST00000410093 IMUPQ9GZP8 106 aa8.95□□□□□ -0.98
LIMS1-205ENST00000410093 GAGE2DQ9UEU5 116 aa8.95□□□□□ -0.98
LIMS1-205ENST00000410093 LINC00643Q86TS7 51 aa8.95□□□□□ -0.98
LIMS1-205ENST00000410093 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
LIMS1-205ENST00000410093 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
LIMS1-205ENST00000410093 STAB2Q8WWQ8 2551 aa8.93□□□□□ -0.98
LIMS1-205ENST00000410093 ZNF73O43830 326 aaPredicted RBP8.93□□□□□ -0.98
LIMS1-205ENST00000410093 TRBV7-7A0A0K0K1E9 115 aa8.92□□□□□ -0.98
LIMS1-205ENST00000410093 A0A1B0GV72 72 aa8.92□□□□□ -0.98
LIMS1-205ENST00000410093 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.92□□□□□ -0.98
LIMS1-205ENST00000410093 DNAH7Q8WXX0 4024 aa8.91□□□□□ -0.98
LIMS1-205ENST00000410093 COX7BP24311 80 aa8.91□□□□□ -0.98
LIMS1-205ENST00000410093 USP17L23D6RBM5 183 aa8.9□□□□□ -0.98
LIMS1-205ENST00000410093 PDE6GP18545 87 aa8.9□□□□□ -0.98
LIMS1-205ENST00000410093 ELOF1P60002 83 aaKnown RBP8.9□□□□□ -0.98
LIMS1-205ENST00000410093 GAGE2AQ6NT46 116 aa8.9□□□□□ -0.98
LIMS1-205ENST00000410093 Q6ZRP5 223 aa8.9□□□□□ -0.98
LIMS1-205ENST00000410093 KMT2CQ8NEZ4 4911 aaKnown RBP8.9□□□□□ -0.99
LIMS1-205ENST00000410093 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.99
LIMS1-205ENST00000410093 LOC100996750A0A140TA64 210 aa8.9□□□□□ -0.99
LIMS1-205ENST00000410093 SLPIP03973 132 aa8.9□□□□□ -0.99
LIMS1-205ENST00000410093 KRTAP4-6Q9BYQ5 205 aa8.9□□□□□ -0.99
LIMS1-205ENST00000410093 CCKP06307 115 aa8.89□□□□□ -0.99
LIMS1-205ENST00000410093 NKAPP1Q8N9T2 125 aa8.89□□□□□ -0.99
LIMS1-205ENST00000410093 C14orf132Q9NPU4 83 aa8.88□□□□□ -0.99
LIMS1-205ENST00000410093 TTC32Q5I0X7 151 aa8.87□□□□□ -0.99
LIMS1-205ENST00000410093 KCNQ1DNQ9H478 68 aa8.87□□□□□ -0.99
LIMS1-205ENST00000410093 LOC107984640A0A0U1RRK4 108 aa8.86□□□□□ -0.99
LIMS1-205ENST00000410093 C14orf177Q52M58 125 aa8.86□□□□□ -0.99
LIMS1-205ENST00000410093 C9orf129Q5T035 196 aaKnown RBP8.86□□□□□ -0.99
LIMS1-205ENST00000410093 APLNQ9ULZ1 77 aa8.86□□□□□ -0.99
LIMS1-205ENST00000410093 PKIGQ9Y2B9 76 aa8.86□□□□□ -0.99
LIMS1-205ENST00000410093 LOC110117498A0A087WWA1 95 aa8.85□□□□□ -0.99
LIMS1-205ENST00000410093 NUPR2A6NF83 97 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms