RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 PKIGQ9Y2B9 76 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 IGHV1-58A0A0C4DH39 117 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 LINC00959A0A1B0GUT2 108 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 D6R8Y8 96 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 CCL25O15444 150 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 XCL1P47992 114 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 SS18Q15532 418 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 DEFB116Q30KQ4 102 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 Q6ZUT4 128 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 ORMDL3Q8N138 153 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 ZNF664Q8N3J9 261 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 LAMTOR2Q9Y2Q5 125 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 UBE2D4Q9Y2X8 147 aa3.74□□□□□ -1.81
LSM5-203ENST00000409782 IGLV4-69A0A075B6H9 119 aa3.73□□□□□ -1.81
LSM5-203ENST00000409782 C1orf196B1AJZ1 125 aa3.73□□□□□ -1.81
LSM5-203ENST00000409782 NPYP01303 97 aa3.73□□□□□ -1.81
LSM5-203ENST00000409782 KRTAP10-4P60372 401 aaPredicted RBP3.73□□□□□ -1.81
LSM5-203ENST00000409782 SPACA4Q8TDM5 124 aa3.73□□□□□ -1.81
LSM5-203ENST00000409782 SPANXA1Q9NS26 97 aa3.73□□□□□ -1.81
LSM5-203ENST00000409782 LOC389332A0A1B0GUA5 103 aa3.72□□□□□ -1.81
LSM5-203ENST00000409782 COX7A2LO14548 114 aa3.72□□□□□ -1.81
LSM5-203ENST00000409782 SCO1O75880 301 aa3.72□□□□□ -1.81
LSM5-203ENST00000409782 RPL37AP61513 92 aaKnown RBP3.72□□□□□ -1.81
LSM5-203ENST00000409782 MRPS36P82909 103 aaKnown RBP3.72□□□□□ -1.81
LSM5-203ENST00000409782 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
LSM5-203ENST00000409782 TMEM136Q6ZRR5 245 aa3.72□□□□□ -1.81
LSM5-203ENST00000409782 CARD19Q96LW7 228 aa3.72□□□□□ -1.81
LSM5-203ENST00000409782 PRELID3AQ96N28 172 aa3.72□□□□□ -1.81
LSM5-203ENST00000409782 IMMP2LQ96T52 175 aa3.72□□□□□ -1.81
LSM5-203ENST00000409782 TRAV13-1A0A0B4J241 112 aa3.71□□□□□ -1.82
LSM5-203ENST00000409782 ADCYAP1P18509 176 aa3.71□□□□□ -1.82
LSM5-203ENST00000409782 IFI27P40305 119 aaPredicted RBP3.71□□□□□ -1.82
LSM5-203ENST00000409782 MAP1LC3AQ9H492 121 aa3.71□□□□□ -1.82
LSM5-203ENST00000409782 PLAC8Q9NZF1 115 aa3.71□□□□□ -1.82
LSM5-203ENST00000409782 LINC00474Q9P2X8 69 aa3.71□□□□□ -1.82
LSM5-203ENST00000409782 FAT3Q8TDW7 4589 aa3.7□□□□□ -1.82
LSM5-203ENST00000409782 TRAV9-1A0A075B6T8 112 aa3.7□□□□□ -1.82
LSM5-203ENST00000409782 TMEM218A2RU14 115 aa3.7□□□□□ -1.82
LSM5-203ENST00000409782 K7EMI3 77 aa3.7□□□□□ -1.82
LSM5-203ENST00000409782 APOMO95445 188 aa3.7□□□□□ -1.82
LSM5-203ENST00000409782 RPL39P62891 51 aaKnown RBP3.7□□□□□ -1.82
LSM5-203ENST00000409782 IFITM2Q01629 132 aa3.7□□□□□ -1.82
LSM5-203ENST00000409782 COX6A2Q02221 97 aa3.7□□□□□ -1.82
LSM5-203ENST00000409782 A0A096LNI7 61 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 IGKV2-24A0A0C4DH68 120 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 A8MU10 97 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 SPAG11BQ08648 103 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 COX19Q49B96 90 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 COMMD7Q86VX2 200 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 Q8N8P6 123 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 OR10D4PQ8NGN7 298 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 YPEL4Q96NS1 127 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 SEC11CQ9BY50 192 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 NXT2Q9NPJ8 142 aaKnown RBP3.69□□□□□ -1.82
LSM5-203ENST00000409782 CYSLTR1Q9Y271 337 aa3.69□□□□□ -1.82
LSM5-203ENST00000409782 TGIF2-C20orf24A0A0A6YYL0 155 aa3.68□□□□□ -1.82
LSM5-203ENST00000409782 LOC107984640A0A0U1RRK4 108 aa3.68□□□□□ -1.82
LSM5-203ENST00000409782 S100PP25815 95 aa3.68□□□□□ -1.82
LSM5-203ENST00000409782 RHEBQ15382 184 aa3.68□□□□□ -1.82
LSM5-203ENST00000409782 Q6ZRU5 148 aa3.68□□□□□ -1.82
LSM5-203ENST00000409782 C5orf38Q86SI9 138 aa3.68□□□□□ -1.82
LSM5-203ENST00000409782 LINC00526Q96FQ7 95 aa3.68□□□□□ -1.82
LSM5-203ENST00000409782 TMEM141Q96I45 108 aa3.68□□□□□ -1.82
LSM5-203ENST00000409782 C2orf88Q9BSF0 95 aa3.68□□□□□ -1.82
LSM5-203ENST00000409782 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
LSM5-203ENST00000409782 LRP1Q07954 4544 aaKnown RBP3.68□□□□□ -1.82
LSM5-203ENST00000409782 HMCN2Q8NDA2 5059 aa3.67□□□□□ -1.82
LSM5-203ENST00000409782 G0S2P27469 103 aa3.67□□□□□ -1.82
LSM5-203ENST00000409782 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
LSM5-203ENST00000409782 DPH3Q96FX2 82 aa3.67□□□□□ -1.82
LSM5-203ENST00000409782 SND1-IT1Q9HBX3 110 aa3.67□□□□□ -1.82
LSM5-203ENST00000409782 MRPL35Q9NZE8 188 aaKnown RBP3.67□□□□□ -1.82
LSM5-203ENST00000409782 CARHSP1Q9Y2V2 147 aaKnown RBP3.67□□□□□ -1.82
LSM5-203ENST00000409782 IGIPA6NJ69 53 aa3.66□□□□□ -1.82
LSM5-203ENST00000409782 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.66□□□□□ -1.82
LSM5-203ENST00000409782 NDUFA1O15239 70 aa3.66□□□□□ -1.82
LSM5-203ENST00000409782 MT-ND6P03923 174 aa3.66□□□□□ -1.82
LSM5-203ENST00000409782 UBE2D1P51668 147 aa3.66□□□□□ -1.82
LSM5-203ENST00000409782 SEC11AP67812 179 aa3.66□□□□□ -1.82
LSM5-203ENST00000409782 NDUFA5Q16718 116 aa3.66□□□□□ -1.82
LSM5-203ENST00000409782 PDZD11Q5EBL8 140 aa3.66□□□□□ -1.82
LSM5-203ENST00000409782 C10orf91Q5T1B1 145 aa3.66□□□□□ -1.82
LSM5-203ENST00000409782 FAM19A5Q7Z5A7 132 aaPredicted RBP3.66□□□□□ -1.82
LSM5-203ENST00000409782 AMELXQ99217 191 aa3.66□□□□□ -1.82
LSM5-203ENST00000409782 GNB1LQ9BYB4 327 aa3.66□□□□□ -1.82
LSM5-203ENST00000409782 LINC01549A6NIU2 74 aa3.65□□□□□ -1.83
LSM5-203ENST00000409782 FAM19A3Q7Z5A8 133 aa3.65□□□□□ -1.83
LSM5-203ENST00000409782 TOMM6Q96B49 74 aa3.65□□□□□ -1.83
LSM5-203ENST00000409782 PACRGQ96M98 296 aaPredicted RBP3.65□□□□□ -1.83
LSM5-203ENST00000409782 TRBV30A0A0K0K1B3 111 aa3.64□□□□□ -1.83
LSM5-203ENST00000409782 LINC01546A6NGU7 62 aa3.64□□□□□ -1.83
LSM5-203ENST00000409782 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
LSM5-203ENST00000409782 C8orf87E5RJ46 101 aa3.64□□□□□ -1.83
LSM5-203ENST00000409782 HERVK_113P63121 156 aa3.64□□□□□ -1.83
LSM5-203ENST00000409782 C4orf26Q17RF5 130 aa3.64□□□□□ -1.83
LSM5-203ENST00000409782 C6orf48Q9UBA6 75 aa3.64□□□□□ -1.83
LSM5-203ENST00000409782 TINCRA0A1B0GVN0 87 aa3.63□□□□□ -1.83
LSM5-203ENST00000409782 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
LSM5-203ENST00000409782 C9orf116Q5BN46 136 aaPredicted RBP3.63□□□□□ -1.83
LSM5-203ENST00000409782 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms