RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 A0A0J9YXY3 114 aa13.09□□□□□ -0.31
C4orf48-201ENST00000409248 C9orf129Q5T035 196 aaKnown RBP13.08□□□□□ -0.32
C4orf48-201ENST00000409248 PCP2Q8IVA1 136 aa13.08□□□□□ -0.32
C4orf48-201ENST00000409248 PAM16Q9Y3D7 125 aa13.07□□□□□ -0.32
C4orf48-201ENST00000409248 KRTAP10-4P60372 401 aaPredicted RBP13.06□□□□□ -0.32
C4orf48-201ENST00000409248 SCGB1D4Q6XE38 83 aa13.06□□□□□ -0.32
C4orf48-201ENST00000409248 MIR7-3HGQ8N6C7 128 aa13.06□□□□□ -0.32
C4orf48-201ENST00000409248 SND1-IT1Q9HBX3 110 aa13.06□□□□□ -0.32
C4orf48-201ENST00000409248 SPATA45Q537H7 98 aa13.05□□□□□ -0.32
C4orf48-201ENST00000409248 TIMM17BO60830 172 aa13.04□□□□□ -0.32
C4orf48-201ENST00000409248 A0A1W2PNN7 141 aa13.03□□□□□ -0.32
C4orf48-201ENST00000409248 FAM19A5Q7Z5A7 132 aaPredicted RBP13.03□□□□□ -0.32
C4orf48-201ENST00000409248 FAM168BA1KXE4 195 aa13.02□□□□□ -0.33
C4orf48-201ENST00000409248 DAND5Q8N907 189 aa13.01□□□□□ -0.33
C4orf48-201ENST00000409248 TMEM238C9JI98 176 aa13□□□□□ -0.33
C4orf48-201ENST00000409248 COX8AP10176 69 aa13□□□□□ -0.33
C4orf48-201ENST00000409248 FLG2Q5D862 2391 aaPredicted RBP13□□□□□ -0.33
C4orf48-201ENST00000409248 LITAFQ99732 161 aa12.99□□□□□ -0.33
C4orf48-201ENST00000409248 PLA2G2DQ9UNK4 145 aa12.99□□□□□ -0.33
C4orf48-201ENST00000409248 LOC105371267A0A1B0GV96 52 aa12.98□□□□□ -0.33
C4orf48-201ENST00000409248 S100A12P80511 92 aa12.98□□□□□ -0.33
C4orf48-201ENST00000409248 ADAMTSL4-AS1Q5T5F5 129 aa12.98□□□□□ -0.33
C4orf48-201ENST00000409248 SERTAD4-AS1Q5TG53 156 aa12.98□□□□□ -0.33
C4orf48-201ENST00000409248 BOD1L2Q8IYS8 172 aa12.98□□□□□ -0.33
C4orf48-201ENST00000409248 MIEN1Q9BRT3 115 aa12.98□□□□□ -0.33
C4orf48-201ENST00000409248 M0QXV9 152 aa12.97□□□□□ -0.33
C4orf48-201ENST00000409248 RPL24P83731 157 aaKnown RBP12.97□□□□□ -0.33
C4orf48-201ENST00000409248 DLEU1O43261 78 aa12.96□□□□□ -0.33
C4orf48-201ENST00000409248 PRR3P79522 188 aaKnown RBP12.96□□□□□ -0.33
C4orf48-201ENST00000409248 KRTAP7-1Q8IUC3 87 aa12.96□□□□□ -0.33
C4orf48-201ENST00000409248 C14orf144Q96I85 54 aa12.96□□□□□ -0.33
C4orf48-201ENST00000409248 SMIM6P0DI80 62 aa12.95□□□□□ -0.34
C4orf48-201ENST00000409248 NKAPP1Q8N9T2 125 aa12.95□□□□□ -0.34
C4orf48-201ENST00000409248 IGLV5-37A0A075B6J1 123 aa12.94□□□□□ -0.34
C4orf48-201ENST00000409248 LOC107984156A0A0G2JMH3 177 aa12.94□□□□□ -0.34
C4orf48-201ENST00000409248 SLC25A34Q6PIV7 304 aa12.94□□□□□ -0.34
C4orf48-201ENST00000409248 PHF5AQ7RTV0 110 aaKnown RBP12.94□□□□□ -0.34
C4orf48-201ENST00000409248 ARL17AQ8IVW1 177 aa12.94□□□□□ -0.34
C4orf48-201ENST00000409248 SPANXDQ9BXN6 97 aa12.94□□□□□ -0.34
C4orf48-201ENST00000409248 SPANXCQ9NY87 97 aa12.94□□□□□ -0.34
C4orf48-201ENST00000409248 TP73-AS1Q9UF72 201 aa12.94□□□□□ -0.34
C4orf48-201ENST00000409248 C22orf24Q9Y442 160 aa12.94□□□□□ -0.34
C4orf48-201ENST00000409248 VPREB1P12018 145 aa12.93□□□□□ -0.34
C4orf48-201ENST00000409248 NPC2P61916 151 aa12.93□□□□□ -0.34
C4orf48-201ENST00000409248 Q6ZVH6 145 aa12.93□□□□□ -0.34
C4orf48-201ENST00000409248 LBHQ53QV2 105 aaPredicted RBP12.92□□□□□ -0.34
C4orf48-201ENST00000409248 LINC00308Q8TCZ7 52 aa12.92□□□□□ -0.34
C4orf48-201ENST00000409248 COPS9Q8WXC6 57 aa12.92□□□□□ -0.34
C4orf48-201ENST00000409248 HNRNPA3P51991 378 aaKnown RBP12.91□□□□□ -0.34
C4orf48-201ENST00000409248 MRPL55Q7Z7F7 128 aaKnown RBP12.91□□□□□ -0.34
C4orf48-201ENST00000409248 SOSTDC1Q6X4U4 206 aa12.9□□□□□ -0.34
C4orf48-201ENST00000409248 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
C4orf48-201ENST00000409248 IFITM1P13164 125 aa12.89□□□□□ -0.35
C4orf48-201ENST00000409248 UBE2BP63146 152 aa12.89□□□□□ -0.35
C4orf48-201ENST00000409248 SRSF9Q13242 221 aaKnown RBP eCLIP12.89□□□□□ -0.35
C4orf48-201ENST00000409248 Q8NDZ9 215 aa12.89□□□□□ -0.35
C4orf48-201ENST00000409248 MYCBP2O75592 4640 aa12.88□□□□□ -0.35
C4orf48-201ENST00000409248 DMBT1Q9UGM3 2413 aaPredicted RBP12.87□□□□□ -0.35
C4orf48-201ENST00000409248 KRTAP29-1A8MX34 341 aaPredicted RBP12.87□□□□□ -0.35
C4orf48-201ENST00000409248 NDUFC2O95298 119 aa12.87□□□□□ -0.35
C4orf48-201ENST00000409248 GAGE10A6NGK3 116 aa12.86□□□□□ -0.35
C4orf48-201ENST00000409248 J3QL48 77 aa12.86□□□□□ -0.35
C4orf48-201ENST00000409248 EIF4EBP3O60516 100 aaPredicted RBP12.86□□□□□ -0.35
C4orf48-201ENST00000409248 PPDPFQ9H3Y8 114 aa12.86□□□□□ -0.35
C4orf48-201ENST00000409248 M0R378 163 aa12.85□□□□□ -0.35
C4orf48-201ENST00000409248 NCR3O14931 201 aa12.85□□□□□ -0.35
C4orf48-201ENST00000409248 OXTP01178 125 aa12.85□□□□□ -0.35
C4orf48-201ENST00000409248 LINC00167Q96N53 147 aa12.85□□□□□ -0.35
C4orf48-201ENST00000409248 HIGD1BQ9P298 99 aa12.85□□□□□ -0.35
C4orf48-201ENST00000409248 MUSTN1Q8IVN3 82 aa12.84□□□□□ -0.35
C4orf48-201ENST00000409248 PSORS1C2Q9UIG4 136 aa12.84□□□□□ -0.35
C4orf48-201ENST00000409248 TRBV10-2A0A0K0K1G8 114 aa12.83□□□□□ -0.36
C4orf48-201ENST00000409248 HIST1H4GQ99525 98 aa12.83□□□□□ -0.36
C4orf48-201ENST00000409248 UQCR10Q9UDW1 63 aa12.83□□□□□ -0.36
C4orf48-201ENST00000409248 PKHD1L1Q86WI1 4243 aa12.83□□□□□ -0.36
C4orf48-201ENST00000409248 C2orf91Q6ZV80 131 aa12.82□□□□□ -0.36
C4orf48-201ENST00000409248 RPL37AP8A6NKH3 93 aa12.81□□□□□ -0.36
C4orf48-201ENST00000409248 C1orf137Q5JT78 98 aa12.8□□□□□ -0.36
C4orf48-201ENST00000409248 SPINK6Q6UWN8 80 aa12.8□□□□□ -0.36
C4orf48-201ENST00000409248 IGKV2-28A0A075B6P5 120 aa12.79□□□□□ -0.36
C4orf48-201ENST00000409248 IGKV2D-28P01615 120 aa12.79□□□□□ -0.36
C4orf48-201ENST00000409248 KRTAP11-1Q8IUC1 163 aa12.79□□□□□ -0.36
C4orf48-201ENST00000409248 C12orf57Q99622 126 aa12.79□□□□□ -0.36
C4orf48-201ENST00000409248 IGLV1-50A0A075B6I6 118 aa12.78□□□□□ -0.36
C4orf48-201ENST00000409248 LINC00518Q8N0U6 118 aa12.78□□□□□ -0.36
C4orf48-201ENST00000409248 S100A7L2Q5SY68 101 aa12.77□□□□□ -0.37
C4orf48-201ENST00000409248 PRO1933Q9H354 126 aa12.76□□□□□ -0.37
C4orf48-201ENST00000409248 TRBV10-3A0A0K0K1G6 114 aa12.75□□□□□ -0.37
C4orf48-201ENST00000409248 DDTP30046 118 aa12.75□□□□□ -0.37
C4orf48-201ENST00000409248 TAL2Q16559 108 aa12.75□□□□□ -0.37
C4orf48-201ENST00000409248 REG3GQ6UW15 175 aa12.74□□□□□ -0.37
C4orf48-201ENST00000409248 IGLV7-43P04211 117 aa12.73□□□□□ -0.37
C4orf48-201ENST00000409248 OR13C6PQ8NH95 151 aa12.73□□□□□ -0.37
C4orf48-201ENST00000409248 A4D1N5 150 aa12.72□□□□□ -0.37
C4orf48-201ENST00000409248 PRYO14603 147 aa12.72□□□□□ -0.37
C4orf48-201ENST00000409248 IGLV6-57P01721 117 aa12.72□□□□□ -0.37
C4orf48-201ENST00000409248 HSD52Q0P140 79 aa12.71□□□□□ -0.37
C4orf48-201ENST00000409248 CBY1Q9Y3M2 126 aa12.71□□□□□ -0.37
C4orf48-201ENST00000409248 TSTD3H0UI37 97 aa12.7□□□□□ -0.38
C4orf48-201ENST00000409248 BCE1O60756 84 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms