RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 HTN3P15516 51 aa8.79□□□□□ -1
SMARCB1-203ENST00000407082 NTN5Q8WTR8 489 aaPredicted RBP8.79□□□□□ -1
SMARCB1-203ENST00000407082 CHCHD10Q8WYQ3 142 aaPredicted RBP8.79□□□□□ -1
SMARCB1-203ENST00000407082 KRTAP4-5Q9BYR2 181 aa8.79□□□□□ -1
SMARCB1-203ENST00000407082 ABCA13Q86UQ4 5058 aa8.79□□□□□ -1
SMARCB1-203ENST00000407082 CLEC2BQ92478 149 aa8.78□□□□□ -1
SMARCB1-203ENST00000407082 DEFB131BA0A096LNP1 70 aa8.77□□□□□ -1.01
SMARCB1-203ENST00000407082 TRAV10A0A0B4J240 114 aa8.77□□□□□ -1.01
SMARCB1-203ENST00000407082 SNCGO76070 127 aa8.77□□□□□ -1.01
SMARCB1-203ENST00000407082 NDUFC2O95298 119 aa8.77□□□□□ -1.01
SMARCB1-203ENST00000407082 PFN2P35080 140 aa8.77□□□□□ -1.01
SMARCB1-203ENST00000407082 CCL18P55774 89 aa8.77□□□□□ -1.01
SMARCB1-203ENST00000407082 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
SMARCB1-203ENST00000407082 DNAL4O96015 105 aa8.75□□□□□ -1.01
SMARCB1-203ENST00000407082 ACYP1P07311 99 aa8.75□□□□□ -1.01
SMARCB1-203ENST00000407082 FAM240AA0A1B0GVK7 77 aa8.74□□□□□ -1.01
SMARCB1-203ENST00000407082 CLPSL2Q6UWE3 100 aa8.74□□□□□ -1.01
SMARCB1-203ENST00000407082 LYPD5Q6UWN5 251 aa8.74□□□□□ -1.01
SMARCB1-203ENST00000407082 PRR34Q9NV39 138 aa8.74□□□□□ -1.01
SMARCB1-203ENST00000407082 A0A1B0GX51 115 aa8.73□□□□□ -1.01
SMARCB1-203ENST00000407082 OR13C6PQ8NH95 151 aa8.73□□□□□ -1.01
SMARCB1-203ENST00000407082 IGKV2-28A0A075B6P5 120 aa8.72□□□□□ -1.01
SMARCB1-203ENST00000407082 A0A1B0GVY2 172 aa8.72□□□□□ -1.01
SMARCB1-203ENST00000407082 IGKV2D-28P01615 120 aa8.72□□□□□ -1.01
SMARCB1-203ENST00000407082 BAALC-AS2P0C853 105 aa8.72□□□□□ -1.01
SMARCB1-203ENST00000407082 INAFM2P0DMQ5 153 aa8.72□□□□□ -1.01
SMARCB1-203ENST00000407082 KIAA0087Q14695 138 aa8.72□□□□□ -1.01
SMARCB1-203ENST00000407082 LINC00337Q8N6G1 96 aa8.72□□□□□ -1.01
SMARCB1-203ENST00000407082 CDIP1Q9H305 208 aa8.72□□□□□ -1.01
SMARCB1-203ENST00000407082 F8WDY8 70 aa8.71□□□□□ -1.02
SMARCB1-203ENST00000407082 C21orf62-AS1Q17RA5 79 aa8.71□□□□□ -1.02
SMARCB1-203ENST00000407082 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
SMARCB1-203ENST00000407082 TEX49A0A1B0GTD5 131 aa8.7□□□□□ -1.02
SMARCB1-203ENST00000407082 SPAG11BQ08648 103 aa8.7□□□□□ -1.02
SMARCB1-203ENST00000407082 SMIM11BQ8TCY0 68 aa8.7□□□□□ -1.02
SMARCB1-203ENST00000407082 KLK12Q9UKR0 248 aa8.7□□□□□ -1.02
SMARCB1-203ENST00000407082 IGLV10-54A0A075B6I4 117 aa8.69□□□□□ -1.02
SMARCB1-203ENST00000407082 GVQW2A0A096LPI5 108 aaPredicted RBP8.69□□□□□ -1.02
SMARCB1-203ENST00000407082 M0R2N4 97 aa8.69□□□□□ -1.02
SMARCB1-203ENST00000407082 APLNQ9ULZ1 77 aa8.68□□□□□ -1.02
SMARCB1-203ENST00000407082 H3BQ85 93 aa8.67□□□□□ -1.02
SMARCB1-203ENST00000407082 A0A1B0GV72 72 aa8.66□□□□□ -1.02
SMARCB1-203ENST00000407082 ENHOQ6UWT2 76 aa8.66□□□□□ -1.02
SMARCB1-203ENST00000407082 C15orf53Q8NAA6 179 aa8.66□□□□□ -1.02
SMARCB1-203ENST00000407082 VPS13DQ5THJ4 4388 aa8.65□□□□□ -1.02
SMARCB1-203ENST00000407082 RTL8CO15255 209 aa8.65□□□□□ -1.02
SMARCB1-203ENST00000407082 S100A7L2Q5SY68 101 aa8.65□□□□□ -1.02
SMARCB1-203ENST00000407082 Q6Q795 121 aa8.65□□□□□ -1.02
SMARCB1-203ENST00000407082 ZNF561-AS1K7EIQ3 104 aa8.64□□□□□ -1.03
SMARCB1-203ENST00000407082 XGP55808 180 aa8.64□□□□□ -1.03
SMARCB1-203ENST00000407082 GHRHP01286 108 aa8.63□□□□□ -1.03
SMARCB1-203ENST00000407082 GAGE2BQ13066 116 aa8.63□□□□□ -1.03
SMARCB1-203ENST00000407082 GAGE2EQ4V326 116 aa8.63□□□□□ -1.03
SMARCB1-203ENST00000407082 C2orf48Q96LS8 159 aa8.63□□□□□ -1.03
SMARCB1-203ENST00000407082 ORMDL1Q9P0S3 153 aa8.63□□□□□ -1.03
SMARCB1-203ENST00000407082 GAGE2DQ9UEU5 116 aa8.63□□□□□ -1.03
SMARCB1-203ENST00000407082 PKHD1P08F94 4074 aa8.63□□□□□ -1.03
SMARCB1-203ENST00000407082 MT-ATP8P03928 68 aa8.62□□□□□ -1.03
SMARCB1-203ENST00000407082 LINC01556Q5JQF7 62 aa8.62□□□□□ -1.03
SMARCB1-203ENST00000407082 FAM218AQ96MZ4 157 aa8.62□□□□□ -1.03
SMARCB1-203ENST00000407082 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
SMARCB1-203ENST00000407082 C1orf43Q9BWL3 253 aa8.61□□□□□ -1.03
SMARCB1-203ENST00000407082 JMJD7-PLA2G4BH0Y9G9 81 aa8.6□□□□□ -1.03
SMARCB1-203ENST00000407082 TMEM256-PLSCR3K7ERE1 68 aa8.6□□□□□ -1.03
SMARCB1-203ENST00000407082 LECT2O14960 151 aa8.6□□□□□ -1.03
SMARCB1-203ENST00000407082 Q8N3U1 123 aa8.6□□□□□ -1.03
SMARCB1-203ENST00000407082 A0A087WYN8 130 aa8.59□□□□□ -1.03
SMARCB1-203ENST00000407082 WFDC10BQ8IUB3 73 aa8.59□□□□□ -1.03
SMARCB1-203ENST00000407082 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
SMARCB1-203ENST00000407082 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
SMARCB1-203ENST00000407082 IMUPQ9GZP8 106 aa8.59□□□□□ -1.03
SMARCB1-203ENST00000407082 Q9HAA7 133 aa8.59□□□□□ -1.03
SMARCB1-203ENST00000407082 ESRGQ1W209 222 aa8.58□□□□□ -1.04
SMARCB1-203ENST00000407082 RMI2Q96E14 147 aa8.58□□□□□ -1.04
SMARCB1-203ENST00000407082 C9orf116Q5BN46 136 aaPredicted RBP8.57□□□□□ -1.04
SMARCB1-203ENST00000407082 TTC32Q5I0X7 151 aa8.57□□□□□ -1.04
SMARCB1-203ENST00000407082 LINC00643Q86TS7 51 aa8.57□□□□□ -1.04
SMARCB1-203ENST00000407082 UBE2DNLQ8IWF7 75 aa8.57□□□□□ -1.04
SMARCB1-203ENST00000407082 C6orf223Q8N319 242 aa8.57□□□□□ -1.04
SMARCB1-203ENST00000407082 Q8N814 137 aa8.57□□□□□ -1.04
SMARCB1-203ENST00000407082 DNAH11Q96DT5 4516 aa8.56□□□□□ -1.04
SMARCB1-203ENST00000407082 C16orf90A8MZG2 172 aa8.56□□□□□ -1.04
SMARCB1-203ENST00000407082 DNAH10OSP0CZ25 163 aa8.56□□□□□ -1.04
SMARCB1-203ENST00000407082 OBSCN-AS1Q96MR7 158 aa8.56□□□□□ -1.04
SMARCB1-203ENST00000407082 FAT2Q9NYQ8 4349 aa8.56□□□□□ -1.04
SMARCB1-203ENST00000407082 DNAH6Q9C0G6 4158 aa8.56□□□□□ -1.04
SMARCB1-203ENST00000407082 DYNC1H1Q14204 4646 aaKnown RBP8.55□□□□□ -1.04
SMARCB1-203ENST00000407082 DNAH2Q9P225 4427 aa8.55□□□□□ -1.04
SMARCB1-203ENST00000407082 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
SMARCB1-203ENST00000407082 NCR3O14931 201 aa8.55□□□□□ -1.04
SMARCB1-203ENST00000407082 C10orf25Q5T742 122 aa8.55□□□□□ -1.04
SMARCB1-203ENST00000407082 C6orf48Q9UBA6 75 aa8.55□□□□□ -1.04
SMARCB1-203ENST00000407082 LINC00588Q9Y4M8 146 aa8.55□□□□□ -1.04
SMARCB1-203ENST00000407082 DNAH17Q9UFH2 4485 aa8.55□□□□□ -1.04
SMARCB1-203ENST00000407082 IGLV6-57P01721 117 aa8.54□□□□□ -1.04
SMARCB1-203ENST00000407082 KRTAP26-1Q6PEX3 210 aa8.54□□□□□ -1.04
SMARCB1-203ENST00000407082 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
SMARCB1-203ENST00000407082 hADV29S1A0JD25 119 aa8.53□□□□□ -1.04
SMARCB1-203ENST00000407082 CDK2AP2O75956 126 aa8.53□□□□□ -1.04
SMARCB1-203ENST00000407082 C6orf99Q4VX62 202 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms