RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 SCXQ7RTU7 201 aa4.31□□□□□ -1.72
UBBP1-201ENST00000392399 Q8N1X5 172 aa4.31□□□□□ -1.72
UBBP1-201ENST00000392399 SPACA4Q8TDM5 124 aa4.31□□□□□ -1.72
UBBP1-201ENST00000392399 C14orf144Q96I85 54 aa4.31□□□□□ -1.72
UBBP1-201ENST00000392399 C6orf48Q9UBA6 75 aa4.31□□□□□ -1.72
UBBP1-201ENST00000392399 A0A087WYN8 130 aa4.3□□□□□ -1.72
UBBP1-201ENST00000392399 A0A096LNI7 61 aa4.3□□□□□ -1.72
UBBP1-201ENST00000392399 IGKV2D-26A0A0A0MRZ7 120 aa4.3□□□□□ -1.72
UBBP1-201ENST00000392399 IGKV2-24A0A0C4DH68 120 aa4.3□□□□□ -1.72
UBBP1-201ENST00000392399 NMUP48645 174 aa4.3□□□□□ -1.72
UBBP1-201ENST00000392399 TAL2Q16559 108 aa4.3□□□□□ -1.72
UBBP1-201ENST00000392399 PLAC8Q9NZF1 115 aa4.3□□□□□ -1.72
UBBP1-201ENST00000392399 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
UBBP1-201ENST00000392399 MYMXA0A1B0GTQ4 84 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 EPM2AB3EWF7 344 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 PANO1I0J062 215 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 M0R143 59 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 CHTF8P0CG12 524 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 RPL18AQ02543 176 aaKnown RBP4.29□□□□□ -1.72
UBBP1-201ENST00000392399 HSD52Q0P140 79 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 GAGE2BQ13066 116 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 COX17Q14061 63 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 Q6ZRP5 223 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 C2orf91Q6ZV80 131 aa4.29□□□□□ -1.72
UBBP1-201ENST00000392399 J3QQQ9 107 aa4.28□□□□□ -1.72
UBBP1-201ENST00000392399 SMR3BP02814 79 aaPredicted RBP4.28□□□□□ -1.72
UBBP1-201ENST00000392399 LGALS3P17931 250 aaKnown RBP4.28□□□□□ -1.72
UBBP1-201ENST00000392399 HERV-K104P63124 156 aa4.28□□□□□ -1.72
UBBP1-201ENST00000392399 C9orf116Q5BN46 136 aaPredicted RBP4.28□□□□□ -1.72
UBBP1-201ENST00000392399 PCP2Q8IVA1 136 aa4.28□□□□□ -1.72
UBBP1-201ENST00000392399 ZNF815PA8K554 130 aa4.27□□□□□ -1.73
UBBP1-201ENST00000392399 TIMM17BO60830 172 aa4.27□□□□□ -1.73
UBBP1-201ENST00000392399 PLA2G1BP04054 148 aaKnown RBP4.27□□□□□ -1.73
UBBP1-201ENST00000392399 CTAG1AP78358 180 aa4.27□□□□□ -1.73
UBBP1-201ENST00000392399 HAMPP81172 84 aa4.27□□□□□ -1.73
UBBP1-201ENST00000392399 GAGE2EQ4V326 116 aa4.27□□□□□ -1.73
UBBP1-201ENST00000392399 C7orf33Q8WU49 177 aa4.27□□□□□ -1.73
UBBP1-201ENST00000392399 ZNF625Q96I27 306 aaPredicted RBP4.27□□□□□ -1.73
UBBP1-201ENST00000392399 PPDPFQ9H3Y8 114 aa4.27□□□□□ -1.73
UBBP1-201ENST00000392399 SPANXB1Q9NS25 103 aaPredicted RBP4.27□□□□□ -1.73
UBBP1-201ENST00000392399 GAGE2DQ9UEU5 116 aa4.27□□□□□ -1.73
UBBP1-201ENST00000392399 VPS13BQ7Z7G8 4022 aa4.26□□□□□ -1.73
UBBP1-201ENST00000392399 A0A1W2PNN7 141 aa4.26□□□□□ -1.73
UBBP1-201ENST00000392399 Q5VSD8 79 aa4.26□□□□□ -1.73
UBBP1-201ENST00000392399 Q6ZVH6 145 aa4.26□□□□□ -1.73
UBBP1-201ENST00000392399 SNHG12Q9BXW3 62 aa4.26□□□□□ -1.73
UBBP1-201ENST00000392399 TP73-AS1Q9UF72 201 aa4.26□□□□□ -1.73
UBBP1-201ENST00000392399 NDUFA12Q9UI09 145 aa4.26□□□□□ -1.73
UBBP1-201ENST00000392399 ERG28Q9UKR5 140 aa4.26□□□□□ -1.73
UBBP1-201ENST00000392399 A0A0J9YXY3 114 aa4.25□□□□□ -1.73
UBBP1-201ENST00000392399 TSPEAR-AS2P59090 65 aa4.25□□□□□ -1.73
UBBP1-201ENST00000392399 COL5A1-AS1Q5SY13 56 aa4.25□□□□□ -1.73
UBBP1-201ENST00000392399 C9orf129Q5T035 196 aaKnown RBP4.25□□□□□ -1.73
UBBP1-201ENST00000392399 BVES-AS1Q5T3Y7 98 aa4.25□□□□□ -1.73
UBBP1-201ENST00000392399 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
UBBP1-201ENST00000392399 PLA2G2DQ9UNK4 145 aa4.25□□□□□ -1.73
UBBP1-201ENST00000392399 TMEM238C9JI98 176 aa4.24□□□□□ -1.73
UBBP1-201ENST00000392399 PFN2P35080 140 aa4.24□□□□□ -1.73
UBBP1-201ENST00000392399 LINC00158P58513 81 aa4.24□□□□□ -1.73
UBBP1-201ENST00000392399 RPL37AP61513 92 aaKnown RBP4.24□□□□□ -1.73
UBBP1-201ENST00000392399 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
UBBP1-201ENST00000392399 SCGB1D4Q6XE38 83 aa4.24□□□□□ -1.73
UBBP1-201ENST00000392399 TTTY13Q9BZ97 58 aa4.24□□□□□ -1.73
UBBP1-201ENST00000392399 XAGE1AQ9HD64 81 aa4.24□□□□□ -1.73
UBBP1-201ENST00000392399 A6NDN8 102 aa4.23□□□□□ -1.73
UBBP1-201ENST00000392399 H3BS24 57 aa4.23□□□□□ -1.73
UBBP1-201ENST00000392399 MEIG1Q5JSS6 88 aa4.23□□□□□ -1.73
UBBP1-201ENST00000392399 CEND1Q8N111 149 aa4.23□□□□□ -1.73
UBBP1-201ENST00000392399 COPS9Q8WXC6 57 aa4.23□□□□□ -1.73
UBBP1-201ENST00000392399 SPANXDQ9BXN6 97 aa4.23□□□□□ -1.73
UBBP1-201ENST00000392399 KRTAP17-1Q9BYP8 105 aa4.23□□□□□ -1.73
UBBP1-201ENST00000392399 SPANXCQ9NY87 97 aa4.23□□□□□ -1.73
UBBP1-201ENST00000392399 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
UBBP1-201ENST00000392399 IGLV5-37A0A075B6J1 123 aa4.22□□□□□ -1.73
UBBP1-201ENST00000392399 A0A1B0GWB2 263 aa4.22□□□□□ -1.73
UBBP1-201ENST00000392399 FAM168BA1KXE4 195 aa4.22□□□□□ -1.73
UBBP1-201ENST00000392399 M0QXV9 152 aa4.22□□□□□ -1.73
UBBP1-201ENST00000392399 SMIM13P0DJ93 91 aa4.22□□□□□ -1.73
UBBP1-201ENST00000392399 IFITM1P13164 125 aa4.22□□□□□ -1.73
UBBP1-201ENST00000392399 HINT1P49773 126 aaPredicted RBP4.22□□□□□ -1.73
UBBP1-201ENST00000392399 RPL24P83731 157 aaKnown RBP4.22□□□□□ -1.73
UBBP1-201ENST00000392399 FAM19A5Q7Z5A7 132 aaPredicted RBP4.22□□□□□ -1.73
UBBP1-201ENST00000392399 LITAFQ99732 161 aa4.22□□□□□ -1.73
UBBP1-201ENST00000392399 SND1-IT1Q9HBX3 110 aa4.22□□□□□ -1.73
UBBP1-201ENST00000392399 C22orf24Q9Y442 160 aa4.22□□□□□ -1.73
UBBP1-201ENST00000392399 INAFM2P0DMQ5 153 aa4.21□□□□□ -1.74
UBBP1-201ENST00000392399 KRTAP10-4P60372 401 aaPredicted RBP4.21□□□□□ -1.74
UBBP1-201ENST00000392399 PHF5AQ7RTV0 110 aaKnown RBP4.21□□□□□ -1.74
UBBP1-201ENST00000392399 MRPL55Q7Z7F7 128 aaKnown RBP4.21□□□□□ -1.74
UBBP1-201ENST00000392399 KRTAP7-1Q8IUC3 87 aa4.21□□□□□ -1.74
UBBP1-201ENST00000392399 HIST1H4GQ99525 98 aa4.21□□□□□ -1.74
UBBP1-201ENST00000392399 KRTAP4-5Q9BYR2 181 aa4.21□□□□□ -1.74
UBBP1-201ENST00000392399 LOC107984156A0A0G2JMH3 177 aa4.2□□□□□ -1.74
UBBP1-201ENST00000392399 A0A0U1RRA0 63 aa4.2□□□□□ -1.74
UBBP1-201ENST00000392399 UBE2BP63146 152 aa4.2□□□□□ -1.74
UBBP1-201ENST00000392399 SRSF9Q13242 221 aaKnown RBP eCLIP4.2□□□□□ -1.74
UBBP1-201ENST00000392399 SERTAD4-AS1Q5TG53 156 aa4.2□□□□□ -1.74
UBBP1-201ENST00000392399 ARL17AQ8IVW1 177 aa4.2□□□□□ -1.74
UBBP1-201ENST00000392399 MIR7-3HGQ8N6C7 128 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms