RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 LINC00588Q9Y4M8 146 aa12.71□□□□□ -0.37
ERCC2-203ENST00000391944 CAMK2N2Q96S95 79 aa12.71□□□□□ -0.38
ERCC2-203ENST00000391944 MDFIQ99750 246 aa12.71□□□□□ -0.38
ERCC2-203ENST00000391944 Q9HAA7 133 aa12.71□□□□□ -0.38
ERCC2-203ENST00000391944 IGKV2D-24A0A075B6R9 120 aa12.7□□□□□ -0.38
ERCC2-203ENST00000391944 C2orf48Q96LS8 159 aa12.7□□□□□ -0.38
ERCC2-203ENST00000391944 NCR3O14931 201 aa12.69□□□□□ -0.38
ERCC2-203ENST00000391944 DNAL4O96015 105 aa12.69□□□□□ -0.38
ERCC2-203ENST00000391944 C22orf24Q9Y442 160 aa12.69□□□□□ -0.38
ERCC2-203ENST00000391944 LECT2O14960 151 aa12.67□□□□□ -0.38
ERCC2-203ENST00000391944 S100A7L2Q5SY68 101 aa12.66□□□□□ -0.38
ERCC2-203ENST00000391944 Q6ZRU5 148 aa12.66□□□□□ -0.38
ERCC2-203ENST00000391944 F8WDY8 70 aa12.65□□□□□ -0.38
ERCC2-203ENST00000391944 XGP55808 180 aa12.64□□□□□ -0.39
ERCC2-203ENST00000391944 XAGE1AQ9HD64 81 aa12.64□□□□□ -0.39
ERCC2-203ENST00000391944 C21orf62-AS1Q17RA5 79 aa12.63□□□□□ -0.39
ERCC2-203ENST00000391944 A0A1B0GX51 115 aa12.63□□□□□ -0.39
ERCC2-203ENST00000391944 IGLV6-57P01721 117 aa12.62□□□□□ -0.39
ERCC2-203ENST00000391944 COL7A1Q02388 2944 aa12.62□□□□□ -0.39
ERCC2-203ENST00000391944 RPL18AQ02543 176 aaKnown RBP12.62□□□□□ -0.39
ERCC2-203ENST00000391944 FAM240AA0A1B0GVK7 77 aa12.61□□□□□ -0.39
ERCC2-203ENST00000391944 SCGB1A1P11684 91 aa12.61□□□□□ -0.39
ERCC2-203ENST00000391944 C6orf99Q4VX62 202 aa12.61□□□□□ -0.39
ERCC2-203ENST00000391944 UPK3BQ9BT76 320 aa12.61□□□□□ -0.39
ERCC2-203ENST00000391944 NDUFC2-KCTD14E9PQ53 114 aa12.61□□□□□ -0.39
ERCC2-203ENST00000391944 MT-ATP8P03928 68 aa12.61□□□□□ -0.39
ERCC2-203ENST00000391944 LINC00167Q96N53 147 aa12.6□□□□□ -0.39
ERCC2-203ENST00000391944 Q8N814 137 aa12.59□□□□□ -0.39
ERCC2-203ENST00000391944 SYCNQ0VAF6 134 aa12.59□□□□□ -0.39
ERCC2-203ENST00000391944 SLPIP03973 132 aa12.58□□□□□ -0.4
ERCC2-203ENST00000391944 DNAH9Q9NYC9 4486 aa12.58□□□□□ -0.4
ERCC2-203ENST00000391944 ORMDL1Q9P0S3 153 aa12.57□□□□□ -0.4
ERCC2-203ENST00000391944 INAFM2P0DMQ5 153 aa12.56□□□□□ -0.4
ERCC2-203ENST00000391944 STAB2Q8WWQ8 2551 aa12.56□□□□□ -0.4
ERCC2-203ENST00000391944 VPREB1P12018 145 aa12.56□□□□□ -0.4
ERCC2-203ENST00000391944 TRBV10-3A0A0K0K1G6 114 aa12.55□□□□□ -0.4
ERCC2-203ENST00000391944 RMI2Q96E14 147 aa12.55□□□□□ -0.4
ERCC2-203ENST00000391944 B9D2Q9BPU9 175 aa12.55□□□□□ -0.4
ERCC2-203ENST00000391944 DNAH1Q9P2D7 4330 aa12.55□□□□□ -0.4
ERCC2-203ENST00000391944 Q6ZRP5 223 aa12.55□□□□□ -0.4
ERCC2-203ENST00000391944 SNCGO76070 127 aa12.54□□□□□ -0.4
ERCC2-203ENST00000391944 ACYP1P07311 99 aa12.54□□□□□ -0.4
ERCC2-203ENST00000391944 LINC00575Q6W349 94 aa12.54□□□□□ -0.4
ERCC2-203ENST00000391944 OBSCN-AS1Q96MR7 158 aa12.54□□□□□ -0.4
ERCC2-203ENST00000391944 GAGE2EQ4V326 116 aa12.54□□□□□ -0.4
ERCC2-203ENST00000391944 GAGE2DQ9UEU5 116 aa12.54□□□□□ -0.4
ERCC2-203ENST00000391944 C9orf129Q5T035 196 aaKnown RBP12.53□□□□□ -0.4
ERCC2-203ENST00000391944 USP17L23D6RBM5 183 aa12.52□□□□□ -0.41
ERCC2-203ENST00000391944 CASC10Q5T4H9 136 aa12.52□□□□□ -0.41
ERCC2-203ENST00000391944 TRAV23DV6A0A075B6W5 121 aa12.51□□□□□ -0.41
ERCC2-203ENST00000391944 M0R378 163 aa12.51□□□□□ -0.41
ERCC2-203ENST00000391944 TMEM256-PLSCR3K7ERE1 68 aa12.49□□□□□ -0.41
ERCC2-203ENST00000391944 hADV29S1A0JD25 119 aa12.49□□□□□ -0.41
ERCC2-203ENST00000391944 TLX1NBP0CAT3 122 aa12.49□□□□□ -0.41
ERCC2-203ENST00000391944 DIRC1Q969H9 104 aa12.48□□□□□ -0.41
ERCC2-203ENST00000391944 ZNF73O43830 326 aaPredicted RBP12.47□□□□□ -0.41
ERCC2-203ENST00000391944 APLNQ9ULZ1 77 aa12.47□□□□□ -0.41
ERCC2-203ENST00000391944 C14orf132Q9NPU4 83 aa12.46□□□□□ -0.41
ERCC2-203ENST00000391944 TRBV7-6A0A0J9YX20 115 aa12.45□□□□□ -0.42
ERCC2-203ENST00000391944 GAGE2AQ6NT46 116 aa12.44□□□□□ -0.42
ERCC2-203ENST00000391944 DYNC2H1Q8NCM8 4307 aaKnown RBP12.44□□□□□ -0.42
ERCC2-203ENST00000391944 TTC32Q5I0X7 151 aa12.44□□□□□ -0.42
ERCC2-203ENST00000391944 SDIM1Q6ZPB5 146 aa12.43□□□□□ -0.42
ERCC2-203ENST00000391944 JMJD7-PLA2G4BH0Y9G9 81 aa12.43□□□□□ -0.42
ERCC2-203ENST00000391944 COX7BP24311 80 aa12.43□□□□□ -0.42
ERCC2-203ENST00000391944 ELOF1P60002 83 aaKnown RBP12.42□□□□□ -0.42
ERCC2-203ENST00000391944 KRTAP1-5Q9BYS1 174 aa12.42□□□□□ -0.42
ERCC2-203ENST00000391944 PLA2G2DQ9UNK4 145 aa12.42□□□□□ -0.42
ERCC2-203ENST00000391944 NHLRC4P0CG21 123 aaPredicted RBP12.41□□□□□ -0.42
ERCC2-203ENST00000391944 GAGE2BQ13066 116 aa12.4□□□□□ -0.42
ERCC2-203ENST00000391944 UBE2DNLQ8IWF7 75 aa12.4□□□□□ -0.42
ERCC2-203ENST00000391944 SERTAD4-AS1Q5TG53 156 aa12.4□□□□□ -0.42
ERCC2-203ENST00000391944 SMCR5Q8TEV8 140 aa12.4□□□□□ -0.42
ERCC2-203ENST00000391944 Q6Q795 121 aa12.39□□□□□ -0.43
ERCC2-203ENST00000391944 NKAPP1Q8N9T2 125 aa12.39□□□□□ -0.43
ERCC2-203ENST00000391944 LYSTQ99698 3801 aa12.39□□□□□ -0.43
ERCC2-203ENST00000391944 Q6ZQY7 126 aa12.39□□□□□ -0.43
ERCC2-203ENST00000391944 H3BQ85 93 aa12.38□□□□□ -0.43
ERCC2-203ENST00000391944 LINC00643Q86TS7 51 aa12.38□□□□□ -0.43
ERCC2-203ENST00000391944 A0A1B0GV72 72 aa12.37□□□□□ -0.43
ERCC2-203ENST00000391944 C7orf33Q8WU49 177 aa12.36□□□□□ -0.43
ERCC2-203ENST00000391944 KCNQ1DNQ9H478 68 aa12.36□□□□□ -0.43
ERCC2-203ENST00000391944 CCKP06307 115 aa12.36□□□□□ -0.43
ERCC2-203ENST00000391944 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.36□□□□□ -0.43
ERCC2-203ENST00000391944 LINC00528Q8N1L1 170 aa12.36□□□□□ -0.43
ERCC2-203ENST00000391944 CSMD3Q7Z407 3707 aa12.35□□□□□ -0.43
ERCC2-203ENST00000391944 IGLV5-37A0A075B6J1 123 aa12.35□□□□□ -0.43
ERCC2-203ENST00000391944 TRBV7-7A0A0K0K1E9 115 aa12.34□□□□□ -0.43
ERCC2-203ENST00000391944 LOC107984640A0A0U1RRK4 108 aa12.34□□□□□ -0.43
ERCC2-203ENST00000391944 NUPR2A6NF83 97 aa12.33□□□□□ -0.44
ERCC2-203ENST00000391944 TENM2Q9NT68 2774 aa12.33□□□□□ -0.44
ERCC2-203ENST00000391944 FAM168BA1KXE4 195 aa12.32□□□□□ -0.44
ERCC2-203ENST00000391944 GHRHP01286 108 aa12.32□□□□□ -0.44
ERCC2-203ENST00000391944 DNAH10Q8IVF4 4471 aa12.32□□□□□ -0.44
ERCC2-203ENST00000391944 PSCAO43653 123 aa12.31□□□□□ -0.44
ERCC2-203ENST00000391944 LINC00846Q9NV44 126 aa12.31□□□□□ -0.44
ERCC2-203ENST00000391944 LAMTOR3Q9UHA4 124 aa12.31□□□□□ -0.44
ERCC2-203ENST00000391944 RBM3P98179 157 aaKnown RBP12.31□□□□□ -0.44
ERCC2-203ENST00000391944 KRTAP7-1Q8IUC3 87 aa12.3□□□□□ -0.44
ERCC2-203ENST00000391944 IMUPQ9GZP8 106 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 250.1 ms