RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 HIST1H2BDP58876 126 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HIST1H2BCP62807 126 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HIST2H2BEQ16778 126 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-202ENST00000380747 PHF5AQ7RTV0 110 aaKnown RBP5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HIST1H2BHQ93079 126 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HIST1H2BNQ99877 126 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HIST1H2BMQ99879 126 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HSPB8Q9UJY1 196 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 IGLV5-39A0A0G2JS06 123 aa5.75□□□□□ -1.49
HMGN1-202ENST00000380747 PRR3P79522 188 aaKnown RBP5.75□□□□□ -1.49
HMGN1-202ENST00000380747 C9orf129Q5T035 196 aaKnown RBP5.75□□□□□ -1.49
HMGN1-202ENST00000380747 XAGE1AQ9HD64 81 aa5.75□□□□□ -1.49
HMGN1-202ENST00000380747 TMEM223A0PJW6 202 aa5.74□□□□□ -1.49
HMGN1-202ENST00000380747 S100A1P23297 94 aa5.74□□□□□ -1.49
HMGN1-202ENST00000380747 TNXBP22105 4242 aa5.74□□□□□ -1.49
HMGN1-202ENST00000380747 M0QXV9 152 aa5.73□□□□□ -1.49
HMGN1-202ENST00000380747 PFN2P35080 140 aa5.73□□□□□ -1.49
HMGN1-202ENST00000380747 KRTAP7-1Q8IUC3 87 aa5.73□□□□□ -1.49
HMGN1-202ENST00000380747 ZNF625Q96I27 306 aaPredicted RBP5.73□□□□□ -1.49
HMGN1-202ENST00000380747 PMCHL2Q9BQD1 86 aa5.73□□□□□ -1.49
HMGN1-202ENST00000380747 ATP6V1G1O75348 118 aa5.72□□□□□ -1.49
HMGN1-202ENST00000380747 UBE2BP63146 152 aa5.72□□□□□ -1.49
HMGN1-202ENST00000380747 MAP1LC3CQ9BXW4 147 aa5.72□□□□□ -1.49
HMGN1-202ENST00000380747 ERG28Q9UKR5 140 aa5.72□□□□□ -1.49
HMGN1-202ENST00000380747 DPM2O94777 84 aa5.71□□□□□ -1.5
HMGN1-202ENST00000380747 PLNP26678 52 aa5.71□□□□□ -1.5
HMGN1-202ENST00000380747 KRTAP4-2Q9BYR5 136 aa5.71□□□□□ -1.5
HMGN1-202ENST00000380747 PSORS1C2Q9UIG4 136 aa5.71□□□□□ -1.5
HMGN1-202ENST00000380747 C1orf137Q5JT78 98 aa5.7□□□□□ -1.5
HMGN1-202ENST00000380747 SFTA2Q6UW10 78 aa5.7□□□□□ -1.5
HMGN1-202ENST00000380747 KRTAP11-1Q8IUC1 163 aa5.7□□□□□ -1.5
HMGN1-202ENST00000380747 C22orf24Q9Y442 160 aa5.7□□□□□ -1.5
HMGN1-202ENST00000380747 IGKCP01834 107 aa5.69□□□□□ -1.5
HMGN1-202ENST00000380747 HERVK_113P61574 105 aa5.69□□□□□ -1.5
HMGN1-202ENST00000380747 LBHQ53QV2 105 aaPredicted RBP5.69□□□□□ -1.5
HMGN1-202ENST00000380747 A0A0U1RRA0 63 aa5.68□□□□□ -1.5
HMGN1-202ENST00000380747 SYS1-DBNDD2H3BUS1 97 aa5.68□□□□□ -1.5
HMGN1-202ENST00000380747 LINC00158P58513 81 aa5.68□□□□□ -1.5
HMGN1-202ENST00000380747 COX17Q14061 63 aa5.68□□□□□ -1.5
HMGN1-202ENST00000380747 MEIG1Q5JSS6 88 aa5.68□□□□□ -1.5
HMGN1-202ENST00000380747 COA6Q5JTJ3 125 aaKnown RBP5.68□□□□□ -1.5
HMGN1-202ENST00000380747 SND1-IT1Q9HBX3 110 aa5.68□□□□□ -1.5
HMGN1-202ENST00000380747 GAGE10A6NGK3 116 aa5.67□□□□□ -1.5
HMGN1-202ENST00000380747 LEPROTO15243 131 aa5.67□□□□□ -1.5
HMGN1-202ENST00000380747 SPINK6Q6UWN8 80 aa5.67□□□□□ -1.5
HMGN1-202ENST00000380747 MRPL55Q7Z7F7 128 aaKnown RBP5.67□□□□□ -1.5
HMGN1-202ENST00000380747 NKAPP1Q8N9T2 125 aa5.67□□□□□ -1.5
HMGN1-202ENST00000380747 PLEKHB2Q96CS7 222 aa5.67□□□□□ -1.5
HMGN1-202ENST00000380747 NDUFA12Q9UI09 145 aa5.67□□□□□ -1.5
HMGN1-202ENST00000380747 MYMXA0A1B0GTQ4 84 aa5.66□□□□□ -1.5
HMGN1-202ENST00000380747 IGLV7-43P04211 117 aa5.66□□□□□ -1.5
HMGN1-202ENST00000380747 SMIM13P0DJ93 91 aa5.66□□□□□ -1.5
HMGN1-202ENST00000380747 LGALS3P17931 250 aaKnown RBP5.66□□□□□ -1.5
HMGN1-202ENST00000380747 TSPEAR-AS2P59090 65 aa5.66□□□□□ -1.5
HMGN1-202ENST00000380747 KRTDAPP60985 99 aa5.66□□□□□ -1.5
HMGN1-202ENST00000380747 HERV-K104P63124 156 aa5.66□□□□□ -1.5
HMGN1-202ENST00000380747 SRSF9Q13242 221 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGN1-202ENST00000380747 PET117Q6UWS5 81 aa5.66□□□□□ -1.5
HMGN1-202ENST00000380747 LINC00167Q96N53 147 aa5.66□□□□□ -1.5
HMGN1-202ENST00000380747 TP73-AS1Q9UF72 201 aa5.66□□□□□ -1.5
HMGN1-202ENST00000380747 IGLV5-37A0A075B6J1 123 aa5.65□□□□□ -1.5
HMGN1-202ENST00000380747 RPL37AP8A6NKH3 93 aa5.65□□□□□ -1.5
HMGN1-202ENST00000380747 J3QQQ9 107 aa5.65□□□□□ -1.5
HMGN1-202ENST00000380747 C3orf79P0CE67 100 aa5.65□□□□□ -1.5
HMGN1-202ENST00000380747 REG3GQ6UW15 175 aa5.65□□□□□ -1.5
HMGN1-202ENST00000380747 LINC00587B1AMM8 73 aa5.64□□□□□ -1.51
HMGN1-202ENST00000380747 VPREB1P12018 145 aa5.64□□□□□ -1.51
HMGN1-202ENST00000380747 RPL24P83731 157 aaKnown RBP5.64□□□□□ -1.51
HMGN1-202ENST00000380747 LINC01545Q5VT33 79 aa5.64□□□□□ -1.51
HMGN1-202ENST00000380747 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
HMGN1-202ENST00000380747 NMUP48645 174 aa5.63□□□□□ -1.51
HMGN1-202ENST00000380747 MIR7-3HGQ8N6C7 128 aa5.63□□□□□ -1.51
HMGN1-202ENST00000380747 Q8NDZ9 215 aa5.63□□□□□ -1.51
HMGN1-202ENST00000380747 DIRC1Q969H9 104 aa5.63□□□□□ -1.51
HMGN1-202ENST00000380747 IGKV2-28A0A075B6P5 120 aa5.62□□□□□ -1.51
HMGN1-202ENST00000380747 C20orf202A1L168 122 aa5.62□□□□□ -1.51
HMGN1-202ENST00000380747 E9PLD3 99 aa5.62□□□□□ -1.51
HMGN1-202ENST00000380747 IGKV2D-28P01615 120 aa5.62□□□□□ -1.51
HMGN1-202ENST00000380747 BOD1L2Q8IYS8 172 aa5.62□□□□□ -1.51
HMGN1-202ENST00000380747 BCE1O60756 84 aa5.61□□□□□ -1.51
HMGN1-202ENST00000380747 S100A6P06703 90 aa5.61□□□□□ -1.51
HMGN1-202ENST00000380747 S100A2P29034 98 aa5.61□□□□□ -1.51
HMGN1-202ENST00000380747 DAND5Q8N907 189 aa5.61□□□□□ -1.51
HMGN1-202ENST00000380747 LINC01600Q96MT4 127 aa5.61□□□□□ -1.51
HMGN1-202ENST00000380747 H0Y9J4 135 aa5.6□□□□□ -1.51
HMGN1-202ENST00000380747 HIST3H2BBQ8N257 126 aa5.6□□□□□ -1.51
HMGN1-202ENST00000380747 IGLV1-50A0A075B6I6 118 aa5.59□□□□□ -1.51
HMGN1-202ENST00000380747 A0A0J9YXY3 114 aa5.59□□□□□ -1.51
HMGN1-202ENST00000380747 M0R378 163 aa5.59□□□□□ -1.51
HMGN1-202ENST00000380747 PRYO14603 147 aa5.59□□□□□ -1.51
HMGN1-202ENST00000380747 NCR3O14931 201 aa5.59□□□□□ -1.51
HMGN1-202ENST00000380747 ZNF861PO60384 105 aa5.59□□□□□ -1.51
HMGN1-202ENST00000380747 RPL28P46779 137 aaKnown RBP5.59□□□□□ -1.51
HMGN1-202ENST00000380747 PCP4P48539 62 aa5.59□□□□□ -1.51
HMGN1-202ENST00000380747 UBE2AP49459 152 aa5.59□□□□□ -1.51
HMGN1-202ENST00000380747 ATOH7Q8N100 152 aa5.59□□□□□ -1.51
HMGN1-202ENST00000380747 IGKV2D-26A0A0A0MRZ7 120 aa5.58□□□□□ -1.52
HMGN1-202ENST00000380747 ZNF815PA8K554 130 aa5.58□□□□□ -1.52
HMGN1-202ENST00000380747 TMEM238C9JI98 176 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms