RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GVQW2A0A096LPI5 108 aaPredicted RBP13.55□□□□□ -0.24
VSX1-202ENST00000376709 S100A7L2Q5SY68 101 aa13.54□□□□□ -0.24
VSX1-202ENST00000376709 C6orf48Q9UBA6 75 aa13.54□□□□□ -0.24
VSX1-202ENST00000376709 HIGD2BQ4VC39 106 aa13.54□□□□□ -0.24
VSX1-202ENST00000376709 TTC32Q5I0X7 151 aa13.54□□□□□ -0.24
VSX1-202ENST00000376709 LINC01556Q5JQF7 62 aa13.53□□□□□ -0.24
VSX1-202ENST00000376709 KRTAP26-1Q6PEX3 210 aa13.52□□□□□ -0.24
VSX1-202ENST00000376709 C1orf43Q9BWL3 253 aa13.52□□□□□ -0.24
VSX1-202ENST00000376709 A0A1B0GV72 72 aa13.52□□□□□ -0.25
VSX1-202ENST00000376709 HUWE1Q7Z6Z7 4374 aaKnown RBP13.51□□□□□ -0.25
VSX1-202ENST00000376709 CAMK2N2Q96S95 79 aa13.51□□□□□ -0.25
VSX1-202ENST00000376709 INAFM2P0DMQ5 153 aa13.51□□□□□ -0.25
VSX1-202ENST00000376709 TM2D3Q9BRN9 247 aa13.51□□□□□ -0.25
VSX1-202ENST00000376709 TRAV10A0A0B4J240 114 aa13.49□□□□□ -0.25
VSX1-202ENST00000376709 SLPIP03973 132 aa13.49□□□□□ -0.25
VSX1-202ENST00000376709 MDFIQ99750 246 aa13.49□□□□□ -0.25
VSX1-202ENST00000376709 IGKV2D-24A0A075B6R9 120 aa13.48□□□□□ -0.25
VSX1-202ENST00000376709 GAGE2BQ13066 116 aa13.48□□□□□ -0.25
VSX1-202ENST00000376709 GAGE2EQ4V326 116 aa13.48□□□□□ -0.25
VSX1-202ENST00000376709 GAGE2DQ9UEU5 116 aa13.48□□□□□ -0.25
VSX1-202ENST00000376709 ACYP1P07311 99 aa13.48□□□□□ -0.25
VSX1-202ENST00000376709 C6orf99Q4VX62 202 aa13.48□□□□□ -0.25
VSX1-202ENST00000376709 XAGE1AQ9HD64 81 aa13.48□□□□□ -0.25
VSX1-202ENST00000376709 ORMDL1Q9P0S3 153 aa13.48□□□□□ -0.25
VSX1-202ENST00000376709 RPL18AQ02543 176 aaKnown RBP13.47□□□□□ -0.25
VSX1-202ENST00000376709 C9orf129Q5T035 196 aaKnown RBP13.47□□□□□ -0.25
VSX1-202ENST00000376709 C15orf56Q8N910 161 aa13.47□□□□□ -0.25
VSX1-202ENST00000376709 A0A1B0GX51 115 aa13.46□□□□□ -0.25
VSX1-202ENST00000376709 Q8N814 137 aa13.46□□□□□ -0.25
VSX1-202ENST00000376709 DNAH10OSP0CZ25 163 aa13.44□□□□□ -0.26
VSX1-202ENST00000376709 Q6ZRU5 148 aa13.44□□□□□ -0.26
VSX1-202ENST00000376709 SMCR5Q8TEV8 140 aa13.43□□□□□ -0.26
VSX1-202ENST00000376709 C2orf48Q96LS8 159 aa13.43□□□□□ -0.26
VSX1-202ENST00000376709 IGLV6-57P01721 117 aa13.42□□□□□ -0.26
VSX1-202ENST00000376709 GAGE2AQ6NT46 116 aa13.42□□□□□ -0.26
VSX1-202ENST00000376709 Q6Q795 121 aa13.42□□□□□ -0.26
VSX1-202ENST00000376709 LINC00167Q96N53 147 aa13.41□□□□□ -0.26
VSX1-202ENST00000376709 C14orf132Q9NPU4 83 aa13.41□□□□□ -0.26
VSX1-202ENST00000376709 ANAPC13Q9BS18 74 aa13.4□□□□□ -0.26
VSX1-202ENST00000376709 LINC00588Q9Y4M8 146 aa13.4□□□□□ -0.26
VSX1-202ENST00000376709 COL7A1Q02388 2944 aa13.39□□□□□ -0.27
VSX1-202ENST00000376709 OBSCN-AS1Q96MR7 158 aa13.39□□□□□ -0.27
VSX1-202ENST00000376709 TRBV10-3A0A0K0K1G6 114 aa13.38□□□□□ -0.27
VSX1-202ENST00000376709 NDUFC2-KCTD14E9PQ53 114 aa13.38□□□□□ -0.27
VSX1-202ENST00000376709 LINC00575Q6W349 94 aa13.37□□□□□ -0.27
VSX1-202ENST00000376709 TMEM256-PLSCR3K7ERE1 68 aa13.37□□□□□ -0.27
VSX1-202ENST00000376709 NDUFV3P56181 108 aaKnown RBP13.37□□□□□ -0.27
VSX1-202ENST00000376709 TRAV23DV6A0A075B6W5 121 aa13.36□□□□□ -0.27
VSX1-202ENST00000376709 TRBV7-7A0A0K0K1E9 115 aa13.35□□□□□ -0.27
VSX1-202ENST00000376709 F8WDY8 70 aa13.35□□□□□ -0.27
VSX1-202ENST00000376709 SYCNQ0VAF6 134 aa13.35□□□□□ -0.27
VSX1-202ENST00000376709 hADV29S1A0JD25 119 aa13.34□□□□□ -0.27
VSX1-202ENST00000376709 SDIM1Q6ZPB5 146 aa13.34□□□□□ -0.27
VSX1-202ENST00000376709 NHLRC4P0CG21 123 aaPredicted RBP13.34□□□□□ -0.27
VSX1-202ENST00000376709 VPREB1P12018 145 aa13.34□□□□□ -0.27
VSX1-202ENST00000376709 DIRC1Q969H9 104 aa13.33□□□□□ -0.28
VSX1-202ENST00000376709 DNAH9Q9NYC9 4486 aa13.33□□□□□ -0.28
VSX1-202ENST00000376709 LINC00643Q86TS7 51 aa13.32□□□□□ -0.28
VSX1-202ENST00000376709 Q6ZRP5 223 aa13.32□□□□□ -0.28
VSX1-202ENST00000376709 JMJD7-PLA2G4BH0Y9G9 81 aa13.31□□□□□ -0.28
VSX1-202ENST00000376709 STAB2Q8WWQ8 2551 aa13.31□□□□□ -0.28
VSX1-202ENST00000376709 ZNF73O43830 326 aaPredicted RBP13.31□□□□□ -0.28
VSX1-202ENST00000376709 M0R378 163 aa13.3□□□□□ -0.28
VSX1-202ENST00000376709 RMI2Q96E14 147 aa13.27□□□□□ -0.29
VSX1-202ENST00000376709 USP17L23D6RBM5 183 aa13.26□□□□□ -0.29
VSX1-202ENST00000376709 COX7BP24311 80 aa13.25□□□□□ -0.29
VSX1-202ENST00000376709 Q6ZQY7 126 aa13.25□□□□□ -0.29
VSX1-202ENST00000376709 UPK3BQ9BT76 320 aa13.25□□□□□ -0.29
VSX1-202ENST00000376709 IMUPQ9GZP8 106 aa13.25□□□□□ -0.29
VSX1-202ENST00000376709 CASC10Q5T4H9 136 aa13.24□□□□□ -0.29
VSX1-202ENST00000376709 LINC00846Q9NV44 126 aa13.24□□□□□ -0.29
VSX1-202ENST00000376709 CCKP06307 115 aa13.24□□□□□ -0.29
VSX1-202ENST00000376709 ELOF1P60002 83 aaKnown RBP13.23□□□□□ -0.29
VSX1-202ENST00000376709 DNAH1Q9P2D7 4330 aa13.23□□□□□ -0.29
VSX1-202ENST00000376709 TRBV7-6A0A0J9YX20 115 aa13.22□□□□□ -0.29
VSX1-202ENST00000376709 LAMTOR3Q9UHA4 124 aa13.22□□□□□ -0.29
VSX1-202ENST00000376709 FAM236AA0A1B0GUQ0 79 aa13.21□□□□□ -0.29
VSX1-202ENST00000376709 FAM236BA0A1B0GV22 79 aa13.21□□□□□ -0.29
VSX1-202ENST00000376709 NKAPP1Q8N9T2 125 aa13.21□□□□□ -0.29
VSX1-202ENST00000376709 LYSTQ99698 3801 aa13.21□□□□□ -0.29
VSX1-202ENST00000376709 B9D2Q9BPU9 175 aa13.2□□□□□ -0.3
VSX1-202ENST00000376709 TLX1NBP0CAT3 122 aa13.19□□□□□ -0.3
VSX1-202ENST00000376709 H3BQ85 93 aa13.18□□□□□ -0.3
VSX1-202ENST00000376709 RBM3P98179 157 aaKnown RBP13.18□□□□□ -0.3
VSX1-202ENST00000376709 CCDC179H3BU77 68 aa13.17□□□□□ -0.3
VSX1-202ENST00000376709 SERTAD4-AS1Q5TG53 156 aa13.17□□□□□ -0.3
VSX1-202ENST00000376709 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.17□□□□□ -0.3
VSX1-202ENST00000376709 DYNC2H1Q8NCM8 4307 aaKnown RBP13.15□□□□□ -0.3
VSX1-202ENST00000376709 GHRHP01286 108 aa13.15□□□□□ -0.3
VSX1-202ENST00000376709 IGKV3D-7A0A0C4DH55 119 aa13.14□□□□□ -0.31
VSX1-202ENST00000376709 LINC00528Q8N1L1 170 aa13.14□□□□□ -0.31
VSX1-202ENST00000376709 Q6JHZ5 121 aa13.13□□□□□ -0.31
VSX1-202ENST00000376709 C7orf33Q8WU49 177 aa13.13□□□□□ -0.31
VSX1-202ENST00000376709 UBE2DNLQ8IWF7 75 aa13.13□□□□□ -0.31
VSX1-202ENST00000376709 CSMD3Q7Z407 3707 aa13.12□□□□□ -0.31
VSX1-202ENST00000376709 DSCR8Q96T75 97 aa13.12□□□□□ -0.31
VSX1-202ENST00000376709 KCNQ1DNQ9H478 68 aa13.11□□□□□ -0.31
VSX1-202ENST00000376709 PLA2G2DQ9UNK4 145 aa13.11□□□□□ -0.31
VSX1-202ENST00000376709 DNHD1Q96M86 4753 aa13.11□□□□□ -0.31
VSX1-202ENST00000376709 B5MCH6 92 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms