RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 NDUFC2O95298 119 aa9.51□□□□□ -0.89
LDB3-204ENST00000372066 IGKV2D-28P01615 120 aa9.51□□□□□ -0.89
LDB3-204ENST00000372066 LINC00337Q8N6G1 96 aa9.51□□□□□ -0.89
LDB3-204ENST00000372066 DNAH10Q8IVF4 4471 aa9.51□□□□□ -0.89
LDB3-204ENST00000372066 IGLV10-54A0A075B6I4 117 aa9.5□□□□□ -0.89
LDB3-204ENST00000372066 Q6ZTC4 211 aa9.5□□□□□ -0.89
LDB3-204ENST00000372066 Q8N3U1 123 aa9.5□□□□□ -0.89
LDB3-204ENST00000372066 NTN5Q8WTR8 489 aaPredicted RBP9.5□□□□□ -0.89
LDB3-204ENST00000372066 UBE2WQ96B02 151 aa9.5□□□□□ -0.89
LDB3-204ENST00000372066 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
LDB3-204ENST00000372066 H0YGX0 51 aa9.5□□□□□ -0.89
LDB3-204ENST00000372066 CDIP1Q9H305 208 aa9.5□□□□□ -0.89
LDB3-204ENST00000372066 SPAG11BQ08648 103 aa9.49□□□□□ -0.89
LDB3-204ENST00000372066 HERC2O95714 4834 aa9.48□□□□□ -0.89
LDB3-204ENST00000372066 ENHOQ6UWT2 76 aa9.48□□□□□ -0.89
LDB3-204ENST00000372066 GVQW2A0A096LPI5 108 aaPredicted RBP9.46□□□□□ -0.89
LDB3-204ENST00000372066 DEFB131BA0A096LNP1 70 aa9.46□□□□□ -0.9
LDB3-204ENST00000372066 SMIM11BQ8TCY0 68 aa9.46□□□□□ -0.9
LDB3-204ENST00000372066 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
LDB3-204ENST00000372066 WFDC10BQ8IUB3 73 aa9.44□□□□□ -0.9
LDB3-204ENST00000372066 TRAV10A0A0B4J240 114 aa9.43□□□□□ -0.9
LDB3-204ENST00000372066 LINC01556Q5JQF7 62 aa9.43□□□□□ -0.9
LDB3-204ENST00000372066 C15orf53Q8NAA6 179 aa9.43□□□□□ -0.9
LDB3-204ENST00000372066 OR13C6PQ8NH95 151 aa9.43□□□□□ -0.9
LDB3-204ENST00000372066 APLNQ9ULZ1 77 aa9.43□□□□□ -0.9
LDB3-204ENST00000372066 F8WDY8 70 aa9.42□□□□□ -0.9
LDB3-204ENST00000372066 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
LDB3-204ENST00000372066 TEX49A0A1B0GTD5 131 aa9.41□□□□□ -0.9
LDB3-204ENST00000372066 FAM240AA0A1B0GVK7 77 aa9.41□□□□□ -0.9
LDB3-204ENST00000372066 A0A1B0GX51 115 aa9.41□□□□□ -0.9
LDB3-204ENST00000372066 DNAL4O96015 105 aa9.41□□□□□ -0.9
LDB3-204ENST00000372066 ESRGQ1W209 222 aa9.41□□□□□ -0.9
LDB3-204ENST00000372066 Q6Q795 121 aa9.41□□□□□ -0.9
LDB3-204ENST00000372066 FAM218AQ96MZ4 157 aa9.41□□□□□ -0.9
LDB3-204ENST00000372066 UNQ6190/PRO20217Q6UXQ8 127 aa9.4□□□□□ -0.9
LDB3-204ENST00000372066 BAALC-AS2P0C853 105 aa9.39□□□□□ -0.91
LDB3-204ENST00000372066 XGP55808 180 aa9.39□□□□□ -0.91
LDB3-204ENST00000372066 KRTAP26-1Q6PEX3 210 aa9.39□□□□□ -0.91
LDB3-204ENST00000372066 C2orf48Q96LS8 159 aa9.38□□□□□ -0.91
LDB3-204ENST00000372066 C1orf43Q9BWL3 253 aa9.38□□□□□ -0.91
LDB3-204ENST00000372066 ZNF561-AS1K7EIQ3 104 aa9.37□□□□□ -0.91
LDB3-204ENST00000372066 DNAH10OSP0CZ25 163 aa9.37□□□□□ -0.91
LDB3-204ENST00000372066 C9orf116Q5BN46 136 aaPredicted RBP9.37□□□□□ -0.91
LDB3-204ENST00000372066 C10orf25Q5T742 122 aa9.37□□□□□ -0.91
LDB3-204ENST00000372066 C6orf223Q8N319 242 aa9.37□□□□□ -0.91
LDB3-204ENST00000372066 HECTD4Q9Y4D8 3996 aa9.37□□□□□ -0.91
LDB3-204ENST00000372066 MT-ATP8P03928 68 aa9.37□□□□□ -0.91
LDB3-204ENST00000372066 ACYP1P07311 99 aa9.37□□□□□ -0.91
LDB3-204ENST00000372066 INAFM2P0DMQ5 153 aa9.37□□□□□ -0.91
LDB3-204ENST00000372066 DNAH6Q9C0G6 4158 aa9.36□□□□□ -0.91
LDB3-204ENST00000372066 KIAA1109Q2LD37 5005 aa9.36□□□□□ -0.91
LDB3-204ENST00000372066 LINC00336Q6ZUF6 198 aa9.36□□□□□ -0.91
LDB3-204ENST00000372066 A0A087WYN8 130 aa9.35□□□□□ -0.91
LDB3-204ENST00000372066 SNCGO76070 127 aa9.35□□□□□ -0.91
LDB3-204ENST00000372066 CAMK2N2Q96S95 79 aa9.35□□□□□ -0.91
LDB3-204ENST00000372066 C6orf48Q9UBA6 75 aa9.35□□□□□ -0.91
LDB3-204ENST00000372066 S100A7L2Q5SY68 101 aa9.34□□□□□ -0.91
LDB3-204ENST00000372066 LINC00167Q96N53 147 aa9.33□□□□□ -0.92
LDB3-204ENST00000372066 LECT2O14960 151 aa9.33□□□□□ -0.92
LDB3-204ENST00000372066 C15orf56Q8N910 161 aa9.33□□□□□ -0.92
LDB3-204ENST00000372066 Q9HAA7 133 aa9.33□□□□□ -0.92
LDB3-204ENST00000372066 PCLOQ9Y6V0 5065 aa9.32□□□□□ -0.92
LDB3-204ENST00000372066 NCR3O14931 201 aa9.32□□□□□ -0.92
LDB3-204ENST00000372066 ORMDL1Q9P0S3 153 aa9.32□□□□□ -0.92
LDB3-204ENST00000372066 M0R2N4 97 aa9.31□□□□□ -0.92
LDB3-204ENST00000372066 LINC00526Q96FQ7 95 aa9.31□□□□□ -0.92
LDB3-204ENST00000372066 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
LDB3-204ENST00000372066 IGKV2D-24A0A075B6R9 120 aa9.3□□□□□ -0.92
LDB3-204ENST00000372066 IGLV6-57P01721 117 aa9.3□□□□□ -0.92
LDB3-204ENST00000372066 PRR3P79522 188 aaKnown RBP9.3□□□□□ -0.92
LDB3-204ENST00000372066 HIGD2BQ4VC39 106 aa9.3□□□□□ -0.92
LDB3-204ENST00000372066 RMI2Q96E14 147 aa9.3□□□□□ -0.92
LDB3-204ENST00000372066 FAT2Q9NYQ8 4349 aa9.3□□□□□ -0.92
LDB3-204ENST00000372066 A0A1B0GVY2 172 aa9.29□□□□□ -0.92
LDB3-204ENST00000372066 OBSCN-AS1Q96MR7 158 aa9.29□□□□□ -0.92
LDB3-204ENST00000372066 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
LDB3-204ENST00000372066 NDUFC2-KCTD14E9PQ53 114 aa9.29□□□□□ -0.92
LDB3-204ENST00000372066 GAGE2BQ13066 116 aa9.29□□□□□ -0.92
LDB3-204ENST00000372066 GAGE2EQ4V326 116 aa9.29□□□□□ -0.92
LDB3-204ENST00000372066 Q8N814 137 aa9.29□□□□□ -0.92
LDB3-204ENST00000372066 Q8NDZ9 215 aa9.29□□□□□ -0.92
LDB3-204ENST00000372066 UPK3BQ9BT76 320 aa9.29□□□□□ -0.92
LDB3-204ENST00000372066 GAGE2DQ9UEU5 116 aa9.29□□□□□ -0.92
LDB3-204ENST00000372066 DNAH17Q9UFH2 4485 aa9.28□□□□□ -0.92
LDB3-204ENST00000372066 H3BQ85 93 aa9.28□□□□□ -0.92
LDB3-204ENST00000372066 C6orf99Q4VX62 202 aa9.28□□□□□ -0.92
LDB3-204ENST00000372066 Q6ZRU5 148 aa9.28□□□□□ -0.92
LDB3-204ENST00000372066 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
LDB3-204ENST00000372066 RTL8CO15255 209 aa9.27□□□□□ -0.93
LDB3-204ENST00000372066 TMEM256-PLSCR3K7ERE1 68 aa9.26□□□□□ -0.93
LDB3-204ENST00000372066 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
LDB3-204ENST00000372066 SYCNQ0VAF6 134 aa9.26□□□□□ -0.93
LDB3-204ENST00000372066 DYNC1H1Q14204 4646 aaKnown RBP9.26□□□□□ -0.93
LDB3-204ENST00000372066 TRBV7-6A0A0J9YX20 115 aa9.25□□□□□ -0.93
LDB3-204ENST00000372066 LINC00575Q6W349 94 aa9.25□□□□□ -0.93
LDB3-204ENST00000372066 UBE2DNLQ8IWF7 75 aa9.25□□□□□ -0.93
LDB3-204ENST00000372066 ANAPC13Q9BS18 74 aa9.25□□□□□ -0.93
LDB3-204ENST00000372066 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
LDB3-204ENST00000372066 RYR1P21817 5038 aa9.25□□□□□ -0.93
LDB3-204ENST00000372066 JMJD7-PLA2G4BH0Y9G9 81 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms