RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 NHLRC4P0CG21 123 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-202ENST00000343765 Q6Q795 121 aa10.03□□□□□ -0.8
VIPAS39-202ENST00000343765 C6orf99Q4VX62 202 aa10.03□□□□□ -0.8
VIPAS39-202ENST00000343765 ORMDL1Q9P0S3 153 aa10.03□□□□□ -0.8
VIPAS39-202ENST00000343765 HIGD2BQ4VC39 106 aa10.03□□□□□ -0.8
VIPAS39-202ENST00000343765 C3orf56Q8N813 242 aa10.02□□□□□ -0.81
VIPAS39-202ENST00000343765 PRB2P02812 416 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-202ENST00000343765 RPL18AQ02543 176 aaKnown RBP10.01□□□□□ -0.81
VIPAS39-202ENST00000343765 XAGE1AQ9HD64 81 aa10.01□□□□□ -0.81
VIPAS39-202ENST00000343765 A0A0J9YWU9 116 aa10□□□□□ -0.81
VIPAS39-202ENST00000343765 Q8N814 137 aa10□□□□□ -0.81
VIPAS39-202ENST00000343765 C6orf48Q9UBA6 75 aa10□□□□□ -0.81
VIPAS39-202ENST00000343765 MGAM2Q2M2H8 2515 aa9.99□□□□□ -0.81
VIPAS39-202ENST00000343765 TRBV7-7A0A0K0K1E9 115 aa9.99□□□□□ -0.81
VIPAS39-202ENST00000343765 LINC00643Q86TS7 51 aa9.99□□□□□ -0.81
VIPAS39-202ENST00000343765 BAHCC1Q9P281 2608 aa9.98□□□□□ -0.81
VIPAS39-202ENST00000343765 ESRGQ1W209 222 aa9.97□□□□□ -0.81
VIPAS39-202ENST00000343765 ZNF561-AS1K7EIQ3 104 aa9.97□□□□□ -0.81
VIPAS39-202ENST00000343765 OBSCN-AS1Q96MR7 158 aa9.97□□□□□ -0.81
VIPAS39-202ENST00000343765 FAM236AA0A1B0GUQ0 79 aa9.96□□□□□ -0.81
VIPAS39-202ENST00000343765 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.81
VIPAS39-202ENST00000343765 CCDC179H3BU77 68 aa9.96□□□□□ -0.82
VIPAS39-202ENST00000343765 EGFEM1PQ0D2K5 195 aa9.96□□□□□ -0.82
VIPAS39-202ENST00000343765 SDIM1Q6ZPB5 146 aa9.96□□□□□ -0.82
VIPAS39-202ENST00000343765 CAMK2N2Q96S95 79 aa9.96□□□□□ -0.82
VIPAS39-202ENST00000343765 DEFB131BA0A096LNP1 70 aa9.95□□□□□ -0.82
VIPAS39-202ENST00000343765 H3BNG1 76 aa9.94□□□□□ -0.82
VIPAS39-202ENST00000343765 LINC00167Q96N53 147 aa9.94□□□□□ -0.82
VIPAS39-202ENST00000343765 LINC00846Q9NV44 126 aa9.94□□□□□ -0.82
VIPAS39-202ENST00000343765 C11orf45Q8TAV5 145 aa9.94□□□□□ -0.82
VIPAS39-202ENST00000343765 GVQW2A0A096LPI5 108 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-202ENST00000343765 TRBV10-3A0A0K0K1G6 114 aa9.93□□□□□ -0.82
VIPAS39-202ENST00000343765 B5MCH6 92 aa9.93□□□□□ -0.82
VIPAS39-202ENST00000343765 A0A1B0GX51 115 aa9.92□□□□□ -0.82
VIPAS39-202ENST00000343765 LINC00575Q6W349 94 aa9.92□□□□□ -0.82
VIPAS39-202ENST00000343765 TMEM256-PLSCR3K7ERE1 68 aa9.92□□□□□ -0.82
VIPAS39-202ENST00000343765 IGLV6-57P01721 117 aa9.92□□□□□ -0.82
VIPAS39-202ENST00000343765 KRTAP26-1Q6PEX3 210 aa9.92□□□□□ -0.82
VIPAS39-202ENST00000343765 Q6ZRU5 148 aa9.92□□□□□ -0.82
VIPAS39-202ENST00000343765 DNAH3Q8TD57 4116 aa9.92□□□□□ -0.82
VIPAS39-202ENST00000343765 IGKV2D-24A0A075B6R9 120 aa9.92□□□□□ -0.82
VIPAS39-202ENST00000343765 IGKV3D-7A0A0C4DH55 119 aa9.92□□□□□ -0.82
VIPAS39-202ENST00000343765 C15orf56Q8N910 161 aa9.91□□□□□ -0.82
VIPAS39-202ENST00000343765 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
VIPAS39-202ENST00000343765 hADV29S1A0JD25 119 aa9.91□□□□□ -0.82
VIPAS39-202ENST00000343765 C1orf43Q9BWL3 253 aa9.91□□□□□ -0.82
VIPAS39-202ENST00000343765 IMUPQ9GZP8 106 aa9.9□□□□□ -0.82
VIPAS39-202ENST00000343765 LYSTQ99698 3801 aa9.89□□□□□ -0.83
VIPAS39-202ENST00000343765 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
VIPAS39-202ENST00000343765 JMJD7-PLA2G4BH0Y9G9 81 aa9.88□□□□□ -0.83
VIPAS39-202ENST00000343765 CCKP06307 115 aa9.88□□□□□ -0.83
VIPAS39-202ENST00000343765 Q6ZQY7 126 aa9.87□□□□□ -0.83
VIPAS39-202ENST00000343765 MRAPQ8TCY5 172 aa9.87□□□□□ -0.83
VIPAS39-202ENST00000343765 DIRC1Q969H9 104 aa9.86□□□□□ -0.83
VIPAS39-202ENST00000343765 SS18L2Q9UHA2 77 aa9.86□□□□□ -0.83
VIPAS39-202ENST00000343765 LAMTOR3Q9UHA4 124 aa9.86□□□□□ -0.83
VIPAS39-202ENST00000343765 LINC01556Q5JQF7 62 aa9.86□□□□□ -0.83
VIPAS39-202ENST00000343765 COL7A1Q02388 2944 aa9.85□□□□□ -0.83
VIPAS39-202ENST00000343765 ZNF73O43830 326 aaPredicted RBP9.85□□□□□ -0.83
VIPAS39-202ENST00000343765 VPREB1P12018 145 aa9.85□□□□□ -0.83
VIPAS39-202ENST00000343765 TENM2Q9NT68 2774 aa9.84□□□□□ -0.83
VIPAS39-202ENST00000343765 NDUFC2-KCTD14E9PQ53 114 aa9.84□□□□□ -0.83
VIPAS39-202ENST00000343765 Q6ZRP5 223 aa9.83□□□□□ -0.84
VIPAS39-202ENST00000343765 STAB2Q8WWQ8 2551 aa9.83□□□□□ -0.84
VIPAS39-202ENST00000343765 A0A087WVE0 104 aa9.83□□□□□ -0.84
VIPAS39-202ENST00000343765 CSMD3Q7Z407 3707 aa9.82□□□□□ -0.84
VIPAS39-202ENST00000343765 Q6JHZ5 121 aa9.82□□□□□ -0.84
VIPAS39-202ENST00000343765 C2orf48Q96LS8 159 aa9.82□□□□□ -0.84
VIPAS39-202ENST00000343765 COX7BP24311 80 aa9.81□□□□□ -0.84
VIPAS39-202ENST00000343765 RBM3P98179 157 aaKnown RBP9.81□□□□□ -0.84
VIPAS39-202ENST00000343765 SYCNQ0VAF6 134 aa9.8□□□□□ -0.84
VIPAS39-202ENST00000343765 M0R378 163 aa9.8□□□□□ -0.84
VIPAS39-202ENST00000343765 HUWE1Q7Z6Z7 4374 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-202ENST00000343765 LINC00588Q9Y4M8 146 aa9.79□□□□□ -0.84
VIPAS39-202ENST00000343765 M0R2N4 97 aa9.79□□□□□ -0.84
VIPAS39-202ENST00000343765 HIST1H4AP62805 103 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-202ENST00000343765 TRAV10A0A0B4J240 114 aa9.78□□□□□ -0.84
VIPAS39-202ENST00000343765 DNAH10OSP0CZ25 163 aa9.78□□□□□ -0.84
VIPAS39-202ENST00000343765 ELOF1P60002 83 aaKnown RBP9.78□□□□□ -0.84
VIPAS39-202ENST00000343765 CASC10Q5T4H9 136 aa9.78□□□□□ -0.84
VIPAS39-202ENST00000343765 Q6ZQT0 140 aa9.78□□□□□ -0.84
VIPAS39-202ENST00000343765 DSCR8Q96T75 97 aa9.76□□□□□ -0.85
VIPAS39-202ENST00000343765 SERTAD4-AS1Q5TG53 156 aa9.75□□□□□ -0.85
VIPAS39-202ENST00000343765 K7EIL1 84 aa9.75□□□□□ -0.85
VIPAS39-202ENST00000343765 UBL5Q9BZL1 73 aa9.75□□□□□ -0.85
VIPAS39-202ENST00000343765 NKAPP1Q8N9T2 125 aa9.74□□□□□ -0.85
VIPAS39-202ENST00000343765 DNAH10Q8IVF4 4471 aa9.74□□□□□ -0.85
VIPAS39-202ENST00000343765 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.74□□□□□ -0.85
VIPAS39-202ENST00000343765 USP17L23D6RBM5 183 aa9.73□□□□□ -0.85
VIPAS39-202ENST00000343765 LOC110117498A0A087WWA1 95 aa9.73□□□□□ -0.85
VIPAS39-202ENST00000343765 C9orf153Q5TBE3 101 aa9.73□□□□□ -0.85
VIPAS39-202ENST00000343765 TM2D3Q9BRN9 247 aa9.73□□□□□ -0.85
VIPAS39-202ENST00000343765 DNAH1Q9P2D7 4330 aa9.72□□□□□ -0.85
VIPAS39-202ENST00000343765 FAM19A1Q7Z5A9 133 aa9.72□□□□□ -0.85
VIPAS39-202ENST00000343765 C3orf22Q8N5N4 141 aa9.72□□□□□ -0.85
VIPAS39-202ENST00000343765 ATOX1O00244 68 aa9.72□□□□□ -0.85
VIPAS39-202ENST00000343765 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
VIPAS39-202ENST00000343765 FAM168BA1KXE4 195 aa9.71□□□□□ -0.86
VIPAS39-202ENST00000343765 TRBV7-6A0A0J9YX20 115 aa9.7□□□□□ -0.86
VIPAS39-202ENST00000343765 C7orf33Q8WU49 177 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms