RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 A0A087WYN8 130 aa12.45□□□□□ -0.42
HOXA9-201ENST00000343483 HUWE1Q7Z6Z7 4374 aaKnown RBP12.45□□□□□ -0.42
HOXA9-201ENST00000343483 KRTAP26-1Q6PEX3 210 aa12.44□□□□□ -0.42
HOXA9-201ENST00000343483 C1orf43Q9BWL3 253 aa12.44□□□□□ -0.42
HOXA9-201ENST00000343483 LINC00588Q9Y4M8 146 aa12.44□□□□□ -0.42
HOXA9-201ENST00000343483 DNAL4O96015 105 aa12.43□□□□□ -0.42
HOXA9-201ENST00000343483 DNAH10OSP0CZ25 163 aa12.43□□□□□ -0.42
HOXA9-201ENST00000343483 HIGD2BQ4VC39 106 aa12.43□□□□□ -0.42
HOXA9-201ENST00000343483 IGKV2D-24A0A075B6R9 120 aa12.42□□□□□ -0.42
HOXA9-201ENST00000343483 FAM240AA0A1B0GVK7 77 aa12.42□□□□□ -0.42
HOXA9-201ENST00000343483 PRR3P79522 188 aaKnown RBP12.42□□□□□ -0.42
HOXA9-201ENST00000343483 SNCGO76070 127 aa12.42□□□□□ -0.42
HOXA9-201ENST00000343483 NDUFC2O95298 119 aa12.42□□□□□ -0.42
HOXA9-201ENST00000343483 C22orf24Q9Y442 160 aa12.42□□□□□ -0.42
HOXA9-201ENST00000343483 ZNF561-AS1K7EIQ3 104 aa12.41□□□□□ -0.42
HOXA9-201ENST00000343483 LECT2O14960 151 aa12.39□□□□□ -0.43
HOXA9-201ENST00000343483 C6orf48Q9UBA6 75 aa12.38□□□□□ -0.43
HOXA9-201ENST00000343483 C15orf56Q8N910 161 aa12.38□□□□□ -0.43
HOXA9-201ENST00000343483 CAMK2N2Q96S95 79 aa12.38□□□□□ -0.43
HOXA9-201ENST00000343483 GVQW2A0A096LPI5 108 aaPredicted RBP12.37□□□□□ -0.43
HOXA9-201ENST00000343483 B9D2Q9BPU9 175 aa12.37□□□□□ -0.43
HOXA9-201ENST00000343483 TMEM126AQ9H061 195 aa12.36□□□□□ -0.43
HOXA9-201ENST00000343483 A0A1B0GV72 72 aa12.35□□□□□ -0.43
HOXA9-201ENST00000343483 NCR3O14931 201 aa12.35□□□□□ -0.43
HOXA9-201ENST00000343483 ACYP1P07311 99 aa12.35□□□□□ -0.43
HOXA9-201ENST00000343483 TTC32Q5I0X7 151 aa12.35□□□□□ -0.43
HOXA9-201ENST00000343483 Q8NDZ9 215 aa12.35□□□□□ -0.43
HOXA9-201ENST00000343483 MUC7Q8TAX7 377 aa12.35□□□□□ -0.43
HOXA9-201ENST00000343483 STAB2Q8WWQ8 2551 aa12.35□□□□□ -0.43
HOXA9-201ENST00000343483 INAFM2P0DMQ5 153 aa12.34□□□□□ -0.43
HOXA9-201ENST00000343483 GAGE2BQ13066 116 aa12.34□□□□□ -0.43
HOXA9-201ENST00000343483 GAGE2EQ4V326 116 aa12.34□□□□□ -0.43
HOXA9-201ENST00000343483 GAGE2DQ9UEU5 116 aa12.34□□□□□ -0.43
HOXA9-201ENST00000343483 SLPIP03973 132 aa12.32□□□□□ -0.44
HOXA9-201ENST00000343483 Q6ZRU5 148 aa12.32□□□□□ -0.44
HOXA9-201ENST00000343483 S100A7L2Q5SY68 101 aa12.31□□□□□ -0.44
HOXA9-201ENST00000343483 XAGE1AQ9HD64 81 aa12.31□□□□□ -0.44
HOXA9-201ENST00000343483 C2orf48Q96LS8 159 aa12.3□□□□□ -0.44
HOXA9-201ENST00000343483 UPK3BQ9BT76 320 aa12.3□□□□□ -0.44
HOXA9-201ENST00000343483 ORMDL1Q9P0S3 153 aa12.3□□□□□ -0.44
HOXA9-201ENST00000343483 Q6Q795 121 aa12.29□□□□□ -0.44
HOXA9-201ENST00000343483 C9orf129Q5T035 196 aaKnown RBP12.28□□□□□ -0.44
HOXA9-201ENST00000343483 A0A1B0GX51 115 aa12.28□□□□□ -0.44
HOXA9-201ENST00000343483 GAGE2AQ6NT46 116 aa12.28□□□□□ -0.44
HOXA9-201ENST00000343483 C6orf99Q4VX62 202 aa12.27□□□□□ -0.45
HOXA9-201ENST00000343483 Q8N814 137 aa12.27□□□□□ -0.45
HOXA9-201ENST00000343483 LINC00167Q96N53 147 aa12.26□□□□□ -0.45
HOXA9-201ENST00000343483 OBSCN-AS1Q96MR7 158 aa12.26□□□□□ -0.45
HOXA9-201ENST00000343483 C14orf132Q9NPU4 83 aa12.26□□□□□ -0.45
HOXA9-201ENST00000343483 RPL18AQ02543 176 aaKnown RBP12.25□□□□□ -0.45
HOXA9-201ENST00000343483 CASC10Q5T4H9 136 aa12.25□□□□□ -0.45
HOXA9-201ENST00000343483 SYCNQ0VAF6 134 aa12.25□□□□□ -0.45
HOXA9-201ENST00000343483 SMCR5Q8TEV8 140 aa12.25□□□□□ -0.45
HOXA9-201ENST00000343483 RMI2Q96E14 147 aa12.25□□□□□ -0.45
HOXA9-201ENST00000343483 NDUFC2-KCTD14E9PQ53 114 aa12.24□□□□□ -0.45
HOXA9-201ENST00000343483 ANAPC13Q9BS18 74 aa12.24□□□□□ -0.45
HOXA9-201ENST00000343483 USP17L23D6RBM5 183 aa12.23□□□□□ -0.45
HOXA9-201ENST00000343483 F8WDY8 70 aa12.23□□□□□ -0.45
HOXA9-201ENST00000343483 UBE2DNLQ8IWF7 75 aa12.23□□□□□ -0.45
HOXA9-201ENST00000343483 IGLV6-57P01721 117 aa12.22□□□□□ -0.45
HOXA9-201ENST00000343483 APLNQ9ULZ1 77 aa12.22□□□□□ -0.45
HOXA9-201ENST00000343483 TRBV7-7A0A0K0K1E9 115 aa12.21□□□□□ -0.45
HOXA9-201ENST00000343483 NHLRC4P0CG21 123 aaPredicted RBP12.21□□□□□ -0.45
HOXA9-201ENST00000343483 NDUFV3P56181 108 aaKnown RBP12.21□□□□□ -0.45
HOXA9-201ENST00000343483 LINC00643Q86TS7 51 aa12.21□□□□□ -0.45
HOXA9-201ENST00000343483 SDIM1Q6ZPB5 146 aa12.2□□□□□ -0.46
HOXA9-201ENST00000343483 LINC00575Q6W349 94 aa12.2□□□□□ -0.46
HOXA9-201ENST00000343483 Q6ZRP5 223 aa12.2□□□□□ -0.46
HOXA9-201ENST00000343483 TMEM256-PLSCR3K7ERE1 68 aa12.18□□□□□ -0.46
HOXA9-201ENST00000343483 KRTAP1-5Q9BYS1 174 aa12.18□□□□□ -0.46
HOXA9-201ENST00000343483 TRBV10-3A0A0K0K1G6 114 aa12.17□□□□□ -0.46
HOXA9-201ENST00000343483 LYSTQ99698 3801 aa12.17□□□□□ -0.46
HOXA9-201ENST00000343483 VPREB1P12018 145 aa12.17□□□□□ -0.46
HOXA9-201ENST00000343483 hADV29S1A0JD25 119 aa12.16□□□□□ -0.46
HOXA9-201ENST00000343483 CSMD3Q7Z407 3707 aa12.15□□□□□ -0.46
HOXA9-201ENST00000343483 TRAV23DV6A0A075B6W5 121 aa12.15□□□□□ -0.46
HOXA9-201ENST00000343483 JMJD7-PLA2G4BH0Y9G9 81 aa12.15□□□□□ -0.46
HOXA9-201ENST00000343483 DNAH7Q8WXX0 4024 aa12.15□□□□□ -0.46
HOXA9-201ENST00000343483 NUPR2A6NF83 97 aa12.14□□□□□ -0.47
HOXA9-201ENST00000343483 IMUPQ9GZP8 106 aa12.14□□□□□ -0.47
HOXA9-201ENST00000343483 DIRC1Q969H9 104 aa12.13□□□□□ -0.47
HOXA9-201ENST00000343483 DNAH1Q9P2D7 4330 aa12.13□□□□□ -0.47
HOXA9-201ENST00000343483 M0R378 163 aa12.11□□□□□ -0.47
HOXA9-201ENST00000343483 CCKP06307 115 aa12.1□□□□□ -0.47
HOXA9-201ENST00000343483 LINC00846Q9NV44 126 aa12.1□□□□□ -0.47
HOXA9-201ENST00000343483 PSCAO43653 123 aa12.1□□□□□ -0.47
HOXA9-201ENST00000343483 ZNF73O43830 326 aaPredicted RBP12.1□□□□□ -0.47
HOXA9-201ENST00000343483 TLX1NBP0CAT3 122 aa12.09□□□□□ -0.47
HOXA9-201ENST00000343483 STARD9Q9P2P6 4700 aa12.08□□□□□ -0.48
HOXA9-201ENST00000343483 TENM2Q9NT68 2774 aa12.07□□□□□ -0.48
HOXA9-201ENST00000343483 COX7BP24311 80 aa12.07□□□□□ -0.48
HOXA9-201ENST00000343483 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
HOXA9-201ENST00000343483 Q6ZQY7 126 aa12.07□□□□□ -0.48
HOXA9-201ENST00000343483 FAM236AA0A1B0GUQ0 79 aa12.06□□□□□ -0.48
HOXA9-201ENST00000343483 FAM236BA0A1B0GV22 79 aa12.06□□□□□ -0.48
HOXA9-201ENST00000343483 SERTAD4-AS1Q5TG53 156 aa12.06□□□□□ -0.48
HOXA9-201ENST00000343483 NKAPP1Q8N9T2 125 aa12.06□□□□□ -0.48
HOXA9-201ENST00000343483 ELOF1P60002 83 aaKnown RBP12.04□□□□□ -0.48
HOXA9-201ENST00000343483 LAMTOR3Q9UHA4 124 aa12.04□□□□□ -0.48
HOXA9-201ENST00000343483 DYNC2H1Q8NCM8 4307 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms