RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 UNQ6190/PRO20217Q6UXQ8 127 aa11.04□□□□□ -0.64
LITAF-201ENST00000339430 Q8NDZ9 215 aa11.04□□□□□ -0.64
LITAF-201ENST00000339430 C14orf132Q9NPU4 83 aa11.04□□□□□ -0.64
LITAF-201ENST00000339430 SPAG11BQ08648 103 aa11.03□□□□□ -0.64
LITAF-201ENST00000339430 TM2D3Q9BRN9 247 aa11.03□□□□□ -0.64
LITAF-201ENST00000339430 A0A0J9YWU9 116 aa11.02□□□□□ -0.65
LITAF-201ENST00000339430 LYPD5Q6UWN5 251 aa11.01□□□□□ -0.65
LITAF-201ENST00000339430 ENHOQ6UWT2 76 aa11.01□□□□□ -0.65
LITAF-201ENST00000339430 NDUFC2O95298 119 aa11.01□□□□□ -0.65
LITAF-201ENST00000339430 TRBV7-7A0A0K0K1E9 115 aa11□□□□□ -0.65
LITAF-201ENST00000339430 TMEM126AQ9H061 195 aa10.99□□□□□ -0.65
LITAF-201ENST00000339430 PRR34Q9NV39 138 aa10.99□□□□□ -0.65
LITAF-201ENST00000339430 KLK5Q9Y337 293 aaPredicted RBP10.99□□□□□ -0.65
LITAF-201ENST00000339430 ORMDL1Q9P0S3 153 aa10.98□□□□□ -0.65
LITAF-201ENST00000339430 LINC00643Q86TS7 51 aa10.98□□□□□ -0.65
LITAF-201ENST00000339430 CCDC179H3BU77 68 aa10.97□□□□□ -0.65
LITAF-201ENST00000339430 C6orf99Q4VX62 202 aa10.97□□□□□ -0.65
LITAF-201ENST00000339430 S100A7L2Q5SY68 101 aa10.97□□□□□ -0.65
LITAF-201ENST00000339430 WFDC10BQ8IUB3 73 aa10.97□□□□□ -0.65
LITAF-201ENST00000339430 Q8N814 137 aa10.96□□□□□ -0.65
LITAF-201ENST00000339430 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
LITAF-201ENST00000339430 Q6ZTC4 211 aa10.95□□□□□ -0.66
LITAF-201ENST00000339430 C11orf45Q8TAV5 145 aa10.95□□□□□ -0.66
LITAF-201ENST00000339430 OBSCN-AS1Q96MR7 158 aa10.95□□□□□ -0.66
LITAF-201ENST00000339430 FAM236AA0A1B0GUQ0 79 aa10.94□□□□□ -0.66
LITAF-201ENST00000339430 FAM236BA0A1B0GV22 79 aa10.94□□□□□ -0.66
LITAF-201ENST00000339430 B5MCH6 92 aa10.94□□□□□ -0.66
LITAF-201ENST00000339430 MEGF8Q7Z7M0 2845 aa10.94□□□□□ -0.66
LITAF-201ENST00000339430 B9D2Q9BPU9 175 aa10.94□□□□□ -0.66
LITAF-201ENST00000339430 COL7A1Q02388 2944 aa10.93□□□□□ -0.66
LITAF-201ENST00000339430 RPL18AQ02543 176 aaKnown RBP10.93□□□□□ -0.66
LITAF-201ENST00000339430 HIGD2BQ4VC39 106 aa10.92□□□□□ -0.66
LITAF-201ENST00000339430 LINC00167Q96N53 147 aa10.92□□□□□ -0.66
LITAF-201ENST00000339430 XAGE1AQ9HD64 81 aa10.92□□□□□ -0.66
LITAF-201ENST00000339430 C6orf48Q9UBA6 75 aa10.92□□□□□ -0.66
LITAF-201ENST00000339430 LINC00846Q9NV44 126 aa10.91□□□□□ -0.66
LITAF-201ENST00000339430 IMUPQ9GZP8 106 aa10.91□□□□□ -0.66
LITAF-201ENST00000339430 HUWE1Q7Z6Z7 4374 aaKnown RBP10.91□□□□□ -0.66
LITAF-201ENST00000339430 STAB2Q8WWQ8 2551 aa10.89□□□□□ -0.67
LITAF-201ENST00000339430 A0A1B0GX51 115 aa10.89□□□□□ -0.67
LITAF-201ENST00000339430 DEFB131BA0A096LNP1 70 aa10.88□□□□□ -0.67
LITAF-201ENST00000339430 TMEM256-PLSCR3K7ERE1 68 aa10.88□□□□□ -0.67
LITAF-201ENST00000339430 SS18L2Q9UHA2 77 aa10.88□□□□□ -0.67
LITAF-201ENST00000339430 IGKV3D-7A0A0C4DH55 119 aa10.87□□□□□ -0.67
LITAF-201ENST00000339430 ESRGQ1W209 222 aa10.87□□□□□ -0.67
LITAF-201ENST00000339430 LINC00575Q6W349 94 aa10.87□□□□□ -0.67
LITAF-201ENST00000339430 ZNF561-AS1K7EIQ3 104 aa10.87□□□□□ -0.67
LITAF-201ENST00000339430 GVQW2A0A096LPI5 108 aaPredicted RBP10.85□□□□□ -0.67
LITAF-201ENST00000339430 IGLV6-57P01721 117 aa10.85□□□□□ -0.67
LITAF-201ENST00000339430 CAMK2N2Q96S95 79 aa10.85□□□□□ -0.67
LITAF-201ENST00000339430 TRBV10-3A0A0K0K1G6 114 aa10.85□□□□□ -0.67
LITAF-201ENST00000339430 MUC7Q8TAX7 377 aa10.85□□□□□ -0.67
LITAF-201ENST00000339430 DNAH9Q9NYC9 4486 aa10.85□□□□□ -0.67
LITAF-201ENST00000339430 hADV29S1A0JD25 119 aa10.84□□□□□ -0.67
LITAF-201ENST00000339430 H3BNG1 76 aa10.84□□□□□ -0.67
LITAF-201ENST00000339430 CCKP06307 115 aa10.84□□□□□ -0.67
LITAF-201ENST00000339430 JMJD7-PLA2G4BH0Y9G9 81 aa10.84□□□□□ -0.67
LITAF-201ENST00000339430 KRTAP26-1Q6PEX3 210 aa10.84□□□□□ -0.67
LITAF-201ENST00000339430 Q6ZRU5 148 aa10.82□□□□□ -0.68
LITAF-201ENST00000339430 TRAV10A0A0B4J240 114 aa10.82□□□□□ -0.68
LITAF-201ENST00000339430 C15orf56Q8N910 161 aa10.82□□□□□ -0.68
LITAF-201ENST00000339430 TRAV23DV6A0A075B6W5 121 aa10.81□□□□□ -0.68
LITAF-201ENST00000339430 PRKDCP78527 4128 aaKnown RBP10.81□□□□□ -0.68
LITAF-201ENST00000339430 IGKV2D-24A0A075B6R9 120 aa10.8□□□□□ -0.68
LITAF-201ENST00000339430 Q6JHZ5 121 aa10.8□□□□□ -0.68
LITAF-201ENST00000339430 Q6ZQY7 126 aa10.79□□□□□ -0.68
LITAF-201ENST00000339430 C1orf43Q9BWL3 253 aa10.79□□□□□ -0.68
LITAF-201ENST00000339430 A0A087WVE0 104 aa10.79□□□□□ -0.68
LITAF-201ENST00000339430 LAMTOR3Q9UHA4 124 aa10.79□□□□□ -0.68
LITAF-201ENST00000339430 DIRC1Q969H9 104 aa10.78□□□□□ -0.68
LITAF-201ENST00000339430 VPREB1P12018 145 aa10.76□□□□□ -0.69
LITAF-201ENST00000339430 ZNF73O43830 326 aaPredicted RBP10.76□□□□□ -0.69
LITAF-201ENST00000339430 RBM3P98179 157 aaKnown RBP10.75□□□□□ -0.69
LITAF-201ENST00000339430 LINC01556Q5JQF7 62 aa10.75□□□□□ -0.69
LITAF-201ENST00000339430 NDUFC2-KCTD14E9PQ53 114 aa10.74□□□□□ -0.69
LITAF-201ENST00000339430 FBN3Q75N90 2809 aa10.74□□□□□ -0.69
LITAF-201ENST00000339430 M0R2N4 97 aa10.73□□□□□ -0.69
LITAF-201ENST00000339430 COX7BP24311 80 aa10.73□□□□□ -0.69
LITAF-201ENST00000339430 HIST1H4AP62805 103 aaKnown RBP10.73□□□□□ -0.69
LITAF-201ENST00000339430 Q6ZRP5 223 aa10.73□□□□□ -0.69
LITAF-201ENST00000339430 C2orf48Q96LS8 159 aa10.73□□□□□ -0.69
LITAF-201ENST00000339430 Q6ZQT0 140 aa10.72□□□□□ -0.69
LITAF-201ENST00000339430 M0R378 163 aa10.71□□□□□ -0.69
LITAF-201ENST00000339430 C3orf22Q8N5N4 141 aa10.71□□□□□ -0.69
LITAF-201ENST00000339430 ELOF1P60002 83 aaKnown RBP10.7□□□□□ -0.7
LITAF-201ENST00000339430 C9orf153Q5TBE3 101 aa10.7□□□□□ -0.7
LITAF-201ENST00000339430 SYCNQ0VAF6 134 aa10.69□□□□□ -0.7
LITAF-201ENST00000339430 ATOX1O00244 68 aa10.69□□□□□ -0.7
LITAF-201ENST00000339430 DSCR8Q96T75 97 aa10.69□□□□□ -0.7
LITAF-201ENST00000339430 UQCRQO14949 82 aa10.68□□□□□ -0.7
LITAF-201ENST00000339430 UBL5Q9BZL1 73 aa10.68□□□□□ -0.7
LITAF-201ENST00000339430 LOC110117498A0A087WWA1 95 aa10.67□□□□□ -0.7
LITAF-201ENST00000339430 DNAH1Q9P2D7 4330 aa10.67□□□□□ -0.7
LITAF-201ENST00000339430 COX7CP15954 63 aa10.67□□□□□ -0.7
LITAF-201ENST00000339430 FAM19A1Q7Z5A9 133 aa10.67□□□□□ -0.7
LITAF-201ENST00000339430 DNAH10OSP0CZ25 163 aa10.66□□□□□ -0.7
LITAF-201ENST00000339430 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.66□□□□□ -0.7
LITAF-201ENST00000339430 USP17L23D6RBM5 183 aa10.65□□□□□ -0.7
LITAF-201ENST00000339430 LINC00588Q9Y4M8 146 aa10.65□□□□□ -0.7
LITAF-201ENST00000339430 CSMD3Q7Z407 3707 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms