RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 KLK5Q9Y337 293 aaPredicted RBP12.74□□□□□ -0.37
RFTN1-201ENST00000334133 A0A0J9YWU9 116 aa12.73□□□□□ -0.37
RFTN1-201ENST00000334133 RPL18AQ02543 176 aaKnown RBP12.73□□□□□ -0.37
RFTN1-201ENST00000334133 TMEM126AQ9H061 195 aa12.72□□□□□ -0.37
RFTN1-201ENST00000334133 INAFM2P0DMQ5 153 aa12.71□□□□□ -0.38
RFTN1-201ENST00000334133 ESRGQ1W209 222 aa12.7□□□□□ -0.38
RFTN1-201ENST00000334133 C6orf48Q9UBA6 75 aa12.7□□□□□ -0.38
RFTN1-201ENST00000334133 ORMDL1Q9P0S3 153 aa12.7□□□□□ -0.38
RFTN1-201ENST00000334133 CMYA5Q8N3K9 4069 aa12.7□□□□□ -0.38
RFTN1-201ENST00000334133 NDUFC2O95298 119 aa12.69□□□□□ -0.38
RFTN1-201ENST00000334133 ACYP1P07311 99 aa12.69□□□□□ -0.38
RFTN1-201ENST00000334133 Q8N814 137 aa12.69□□□□□ -0.38
RFTN1-201ENST00000334133 Q6Q795 121 aa12.66□□□□□ -0.38
RFTN1-201ENST00000334133 ZNF561-AS1K7EIQ3 104 aa12.65□□□□□ -0.38
RFTN1-201ENST00000334133 DEFB131BA0A096LNP1 70 aa12.65□□□□□ -0.38
RFTN1-201ENST00000334133 CCDC179H3BU77 68 aa12.65□□□□□ -0.38
RFTN1-201ENST00000334133 CAMK2N2Q96S95 79 aa12.64□□□□□ -0.39
RFTN1-201ENST00000334133 LINC00643Q86TS7 51 aa12.63□□□□□ -0.39
RFTN1-201ENST00000334133 MGAM2Q2M2H8 2515 aa12.63□□□□□ -0.39
RFTN1-201ENST00000334133 FAM236AA0A1B0GUQ0 79 aa12.63□□□□□ -0.39
RFTN1-201ENST00000334133 FAM236BA0A1B0GV22 79 aa12.63□□□□□ -0.39
RFTN1-201ENST00000334133 C11orf45Q8TAV5 145 aa12.63□□□□□ -0.39
RFTN1-201ENST00000334133 LINC00846Q9NV44 126 aa12.63□□□□□ -0.39
RFTN1-201ENST00000334133 TRBV7-7A0A0K0K1E9 115 aa12.62□□□□□ -0.39
RFTN1-201ENST00000334133 TRBV10-3A0A0K0K1G6 114 aa12.62□□□□□ -0.39
RFTN1-201ENST00000334133 EGFEM1PQ0D2K5 195 aa12.62□□□□□ -0.39
RFTN1-201ENST00000334133 MRAPQ8TCY5 172 aa12.62□□□□□ -0.39
RFTN1-201ENST00000334133 IGKV2D-24A0A075B6R9 120 aa12.61□□□□□ -0.39
RFTN1-201ENST00000334133 B5MCH6 92 aa12.61□□□□□ -0.39
RFTN1-201ENST00000334133 Q6ZRU5 148 aa12.61□□□□□ -0.39
RFTN1-201ENST00000334133 IGKV3D-7A0A0C4DH55 119 aa12.61□□□□□ -0.39
RFTN1-201ENST00000334133 SDIM1Q6ZPB5 146 aa12.6□□□□□ -0.39
RFTN1-201ENST00000334133 OBSCN-AS1Q96MR7 158 aa12.6□□□□□ -0.39
RFTN1-201ENST00000334133 BAHCC1Q9P281 2608 aa12.6□□□□□ -0.39
RFTN1-201ENST00000334133 KRTAP26-1Q6PEX3 210 aa12.6□□□□□ -0.39
RFTN1-201ENST00000334133 C15orf56Q8N910 161 aa12.59□□□□□ -0.39
RFTN1-201ENST00000334133 LINC00575Q6W349 94 aa12.58□□□□□ -0.4
RFTN1-201ENST00000334133 C1orf43Q9BWL3 253 aa12.57□□□□□ -0.4
RFTN1-201ENST00000334133 H3BNG1 76 aa12.57□□□□□ -0.4
RFTN1-201ENST00000334133 IGLV6-57P01721 117 aa12.57□□□□□ -0.4
RFTN1-201ENST00000334133 LINC00167Q96N53 147 aa12.57□□□□□ -0.4
RFTN1-201ENST00000334133 hADV29S1A0JD25 119 aa12.56□□□□□ -0.4
RFTN1-201ENST00000334133 TMEM256-PLSCR3K7ERE1 68 aa12.55□□□□□ -0.4
RFTN1-201ENST00000334133 GVQW2A0A096LPI5 108 aaPredicted RBP12.54□□□□□ -0.4
RFTN1-201ENST00000334133 Q6ZQY7 126 aa12.54□□□□□ -0.4
RFTN1-201ENST00000334133 TRAV23DV6A0A075B6W5 121 aa12.53□□□□□ -0.4
RFTN1-201ENST00000334133 SS18L2Q9UHA2 77 aa12.53□□□□□ -0.4
RFTN1-201ENST00000334133 LAMTOR3Q9UHA4 124 aa12.52□□□□□ -0.41
RFTN1-201ENST00000334133 A0A087WVE0 104 aa12.51□□□□□ -0.41
RFTN1-201ENST00000334133 A0A1B0GX51 115 aa12.51□□□□□ -0.41
RFTN1-201ENST00000334133 CCKP06307 115 aa12.51□□□□□ -0.41
RFTN1-201ENST00000334133 Q6ZRP5 223 aa12.51□□□□□ -0.41
RFTN1-201ENST00000334133 VPREB1P12018 145 aa12.49□□□□□ -0.41
RFTN1-201ENST00000334133 LINC01556Q5JQF7 62 aa12.49□□□□□ -0.41
RFTN1-201ENST00000334133 IMUPQ9GZP8 106 aa12.49□□□□□ -0.41
RFTN1-201ENST00000334133 ZNF73O43830 326 aaPredicted RBP12.49□□□□□ -0.41
RFTN1-201ENST00000334133 DIRC1Q969H9 104 aa12.49□□□□□ -0.41
RFTN1-201ENST00000334133 JMJD7-PLA2G4BH0Y9G9 81 aa12.48□□□□□ -0.41
RFTN1-201ENST00000334133 M0R2N4 97 aa12.48□□□□□ -0.41
RFTN1-201ENST00000334133 CASC10Q5T4H9 136 aa12.48□□□□□ -0.41
RFTN1-201ENST00000334133 STAB2Q8WWQ8 2551 aa12.48□□□□□ -0.41
RFTN1-201ENST00000334133 DNAH3Q8TD57 4116 aa12.48□□□□□ -0.41
RFTN1-201ENST00000334133 NDUFC2-KCTD14E9PQ53 114 aa12.47□□□□□ -0.41
RFTN1-201ENST00000334133 MUC7Q8TAX7 377 aa12.47□□□□□ -0.41
RFTN1-201ENST00000334133 LINC00588Q9Y4M8 146 aa12.45□□□□□ -0.42
RFTN1-201ENST00000334133 SYCNQ0VAF6 134 aa12.45□□□□□ -0.42
RFTN1-201ENST00000334133 RBM3P98179 157 aaKnown RBP12.44□□□□□ -0.42
RFTN1-201ENST00000334133 COX7BP24311 80 aa12.44□□□□□ -0.42
RFTN1-201ENST00000334133 HIST1H4AP62805 103 aaKnown RBP12.44□□□□□ -0.42
RFTN1-201ENST00000334133 COL7A1Q02388 2944 aa12.43□□□□□ -0.42
RFTN1-201ENST00000334133 LYSTQ99698 3801 aa12.43□□□□□ -0.42
RFTN1-201ENST00000334133 HUWE1Q7Z6Z7 4374 aaKnown RBP12.42□□□□□ -0.42
RFTN1-201ENST00000334133 K7EIL1 84 aa12.42□□□□□ -0.42
RFTN1-201ENST00000334133 C2orf48Q96LS8 159 aa12.42□□□□□ -0.42
RFTN1-201ENST00000334133 TENM2Q9NT68 2774 aa12.41□□□□□ -0.42
RFTN1-201ENST00000334133 M0R378 163 aa12.41□□□□□ -0.42
RFTN1-201ENST00000334133 SERTAD4-AS1Q5TG53 156 aa12.41□□□□□ -0.42
RFTN1-201ENST00000334133 Q6JHZ5 121 aa12.41□□□□□ -0.42
RFTN1-201ENST00000334133 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.42
RFTN1-201ENST00000334133 TRAV10A0A0B4J240 114 aa12.39□□□□□ -0.43
RFTN1-201ENST00000334133 ELOF1P60002 83 aaKnown RBP12.39□□□□□ -0.43
RFTN1-201ENST00000334133 Q6ZQT0 140 aa12.39□□□□□ -0.43
RFTN1-201ENST00000334133 FAM168BA1KXE4 195 aa12.38□□□□□ -0.43
RFTN1-201ENST00000334133 USP17L23D6RBM5 183 aa12.37□□□□□ -0.43
RFTN1-201ENST00000334133 FAM19A1Q7Z5A9 133 aa12.36□□□□□ -0.43
RFTN1-201ENST00000334133 RPL37AP8A6NKH3 93 aa12.36□□□□□ -0.43
RFTN1-201ENST00000334133 DSCR8Q96T75 97 aa12.36□□□□□ -0.43
RFTN1-201ENST00000334133 NKAPP1Q8N9T2 125 aa12.35□□□□□ -0.43
RFTN1-201ENST00000334133 TM2D3Q9BRN9 247 aa12.34□□□□□ -0.43
RFTN1-201ENST00000334133 UBL5Q9BZL1 73 aa12.33□□□□□ -0.43
RFTN1-201ENST00000334133 DEFB105AQ8NG35 78 aa12.33□□□□□ -0.44
RFTN1-201ENST00000334133 C7orf33Q8WU49 177 aa12.33□□□□□ -0.44
RFTN1-201ENST00000334133 LINC00528Q8N1L1 170 aa12.32□□□□□ -0.44
RFTN1-201ENST00000334133 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
RFTN1-201ENST00000334133 DNAH10Q8IVF4 4471 aa12.32□□□□□ -0.44
RFTN1-201ENST00000334133 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.31□□□□□ -0.44
RFTN1-201ENST00000334133 HAMPP81172 84 aa12.31□□□□□ -0.44
RFTN1-201ENST00000334133 CSMD3Q7Z407 3707 aa12.31□□□□□ -0.44
RFTN1-201ENST00000334133 C3orf22Q8N5N4 141 aa12.3□□□□□ -0.44
RFTN1-201ENST00000334133 LOC110117498A0A087WWA1 95 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms