RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 CDIP1Q9H305 208 aa13.37□□□□□ -0.27
SUMO3-201ENST00000332859 TEX49A0A1B0GTD5 131 aa13.36□□□□□ -0.27
SUMO3-201ENST00000332859 OR13C6PQ8NH95 151 aa13.36□□□□□ -0.27
SUMO3-201ENST00000332859 GVQW2A0A096LPI5 108 aaPredicted RBP13.34□□□□□ -0.27
SUMO3-201ENST00000332859 FAM218AQ96MZ4 157 aa13.34□□□□□ -0.27
SUMO3-201ENST00000332859 UNQ6190/PRO20217Q6UXQ8 127 aa13.34□□□□□ -0.27
SUMO3-201ENST00000332859 C6orf223Q8N319 242 aa13.34□□□□□ -0.27
SUMO3-201ENST00000332859 C15orf56Q8N910 161 aa13.34□□□□□ -0.27
SUMO3-201ENST00000332859 ZNF561-AS1K7EIQ3 104 aa13.33□□□□□ -0.28
SUMO3-201ENST00000332859 SCGB1A1P11684 91 aa13.33□□□□□ -0.28
SUMO3-201ENST00000332859 C9orf116Q5BN46 136 aaPredicted RBP13.33□□□□□ -0.28
SUMO3-201ENST00000332859 DNAH7Q8WXX0 4024 aa13.33□□□□□ -0.28
SUMO3-201ENST00000332859 LINC00526Q96FQ7 95 aa13.32□□□□□ -0.28
SUMO3-201ENST00000332859 HIGD2BQ4VC39 106 aa13.32□□□□□ -0.28
SUMO3-201ENST00000332859 C10orf25Q5T742 122 aa13.32□□□□□ -0.28
SUMO3-201ENST00000332859 BAALC-AS2P0C853 105 aa13.3□□□□□ -0.28
SUMO3-201ENST00000332859 KRTAP1-5Q9BYS1 174 aa13.29□□□□□ -0.28
SUMO3-201ENST00000332859 TMEM126AQ9H061 195 aa13.29□□□□□ -0.28
SUMO3-201ENST00000332859 FBN3Q75N90 2809 aa13.29□□□□□ -0.28
SUMO3-201ENST00000332859 C2orf48Q96LS8 159 aa13.29□□□□□ -0.28
SUMO3-201ENST00000332859 F8WDY8 70 aa13.28□□□□□ -0.28
SUMO3-201ENST00000332859 C21orf62-AS1Q17RA5 79 aa13.28□□□□□ -0.28
SUMO3-201ENST00000332859 TTC32Q5I0X7 151 aa13.28□□□□□ -0.28
SUMO3-201ENST00000332859 CAMK2N2Q96S95 79 aa13.28□□□□□ -0.28
SUMO3-201ENST00000332859 DNAL4O96015 105 aa13.27□□□□□ -0.28
SUMO3-201ENST00000332859 CSMD3Q7Z407 3707 aa13.27□□□□□ -0.29
SUMO3-201ENST00000332859 A0A087WYN8 130 aa13.26□□□□□ -0.29
SUMO3-201ENST00000332859 FAM240AA0A1B0GVK7 77 aa13.25□□□□□ -0.29
SUMO3-201ENST00000332859 C6orf48Q9UBA6 75 aa13.25□□□□□ -0.29
SUMO3-201ENST00000332859 PRR3P79522 188 aaKnown RBP13.25□□□□□ -0.29
SUMO3-201ENST00000332859 CASC10Q5T4H9 136 aa13.25□□□□□ -0.29
SUMO3-201ENST00000332859 WWC2-AS2Q96NR7 200 aa13.25□□□□□ -0.29
SUMO3-201ENST00000332859 NBDYA0A0U1RRE5 68 aa13.24□□□□□ -0.29
SUMO3-201ENST00000332859 A0A1B0GX51 115 aa13.24□□□□□ -0.29
SUMO3-201ENST00000332859 USP17L23D6RBM5 183 aa13.24□□□□□ -0.29
SUMO3-201ENST00000332859 XGP55808 180 aa13.23□□□□□ -0.29
SUMO3-201ENST00000332859 PLECQ15149 4684 aaKnown RBP13.23□□□□□ -0.29
SUMO3-201ENST00000332859 STARD9Q9P2P6 4700 aa13.22□□□□□ -0.29
SUMO3-201ENST00000332859 Q6ZRU5 148 aa13.22□□□□□ -0.29
SUMO3-201ENST00000332859 C22orf24Q9Y442 160 aa13.22□□□□□ -0.29
SUMO3-201ENST00000332859 NCR3O14931 201 aa13.21□□□□□ -0.29
SUMO3-201ENST00000332859 LECT2O14960 151 aa13.21□□□□□ -0.29
SUMO3-201ENST00000332859 DNAH1Q9P2D7 4330 aa13.21□□□□□ -0.3
SUMO3-201ENST00000332859 MT-ATP8P03928 68 aa13.2□□□□□ -0.3
SUMO3-201ENST00000332859 S100A7L2Q5SY68 101 aa13.2□□□□□ -0.3
SUMO3-201ENST00000332859 Q8NDZ9 215 aa13.2□□□□□ -0.3
SUMO3-201ENST00000332859 SYCNQ0VAF6 134 aa13.2□□□□□ -0.3
SUMO3-201ENST00000332859 PSCAO43653 123 aa13.19□□□□□ -0.3
SUMO3-201ENST00000332859 INAFM2P0DMQ5 153 aa13.19□□□□□ -0.3
SUMO3-201ENST00000332859 ACYP1P07311 99 aa13.18□□□□□ -0.3
SUMO3-201ENST00000332859 LINC00167Q96N53 147 aa13.18□□□□□ -0.3
SUMO3-201ENST00000332859 LYSTQ99698 3801 aa13.16□□□□□ -0.3
SUMO3-201ENST00000332859 SNCGO76070 127 aa13.16□□□□□ -0.3
SUMO3-201ENST00000332859 IGLV6-57P01721 117 aa13.16□□□□□ -0.3
SUMO3-201ENST00000332859 ORMDL1Q9P0S3 153 aa13.16□□□□□ -0.3
SUMO3-201ENST00000332859 Q8N814 137 aa13.13□□□□□ -0.31
SUMO3-201ENST00000332859 NDUFC2-KCTD14E9PQ53 114 aa13.13□□□□□ -0.31
SUMO3-201ENST00000332859 RPL18AQ02543 176 aaKnown RBP13.13□□□□□ -0.31
SUMO3-201ENST00000332859 C6orf99Q4VX62 202 aa13.13□□□□□ -0.31
SUMO3-201ENST00000332859 OBSCN-AS1Q96MR7 158 aa13.11□□□□□ -0.31
SUMO3-201ENST00000332859 C14orf177Q52M58 125 aa13.11□□□□□ -0.31
SUMO3-201ENST00000332859 XAGE1AQ9HD64 81 aa13.11□□□□□ -0.31
SUMO3-201ENST00000332859 TENM2Q9NT68 2774 aa13.1□□□□□ -0.31
SUMO3-201ENST00000332859 C3orf84H3BNL1 204 aa13.1□□□□□ -0.31
SUMO3-201ENST00000332859 M0R2N4 97 aa13.1□□□□□ -0.31
SUMO3-201ENST00000332859 SLPIP03973 132 aa13.1□□□□□ -0.31
SUMO3-201ENST00000332859 VPS13DQ5THJ4 4388 aa13.09□□□□□ -0.31
SUMO3-201ENST00000332859 LINC00575Q6W349 94 aa13.09□□□□□ -0.31
SUMO3-201ENST00000332859 Q6ZRN7 208 aaPredicted RBP13.08□□□□□ -0.32
SUMO3-201ENST00000332859 TLX1NBP0CAT3 122 aa13.07□□□□□ -0.32
SUMO3-201ENST00000332859 VPREB1P12018 145 aa13.07□□□□□ -0.32
SUMO3-201ENST00000332859 TMEM256-PLSCR3K7ERE1 68 aa13.06□□□□□ -0.32
SUMO3-201ENST00000332859 Q6ZRP5 223 aa13.06□□□□□ -0.32
SUMO3-201ENST00000332859 TRAV23DV6A0A075B6W5 121 aa13.06□□□□□ -0.32
SUMO3-201ENST00000332859 TRBV10-3A0A0K0K1G6 114 aa13.06□□□□□ -0.32
SUMO3-201ENST00000332859 LY6G6CO95867 125 aa13.06□□□□□ -0.32
SUMO3-201ENST00000332859 Q6Q795 121 aa13.06□□□□□ -0.32
SUMO3-201ENST00000332859 Q6ZR54 194 aa13.06□□□□□ -0.32
SUMO3-201ENST00000332859 M0R378 163 aa13.05□□□□□ -0.32
SUMO3-201ENST00000332859 GAGE2EQ4V326 116 aa13.05□□□□□ -0.32
SUMO3-201ENST00000332859 GAGE2DQ9UEU5 116 aa13.05□□□□□ -0.32
SUMO3-201ENST00000332859 LINC00476Q8WZB0 136 aa13.04□□□□□ -0.32
SUMO3-201ENST00000332859 CNBPP62633 177 aaKnown RBP13.04□□□□□ -0.32
SUMO3-201ENST00000332859 DIRC1Q969H9 104 aa13.04□□□□□ -0.32
SUMO3-201ENST00000332859 hADV29S1A0JD25 119 aa13.03□□□□□ -0.32
SUMO3-201ENST00000332859 LRCOL1A6NCL2 159 aa13.03□□□□□ -0.32
SUMO3-201ENST00000332859 TRBV7-6A0A0J9YX20 115 aa13.02□□□□□ -0.32
SUMO3-201ENST00000332859 JMJD7-PLA2G4BH0Y9G9 81 aa13.02□□□□□ -0.32
SUMO3-201ENST00000332859 GAGE2BQ13066 116 aa13.02□□□□□ -0.32
SUMO3-201ENST00000332859 C9orf129Q5T035 196 aaKnown RBP13.02□□□□□ -0.32
SUMO3-201ENST00000332859 TGP01266 2768 aa13.02□□□□□ -0.33
SUMO3-201ENST00000332859 GAGE2AQ6NT46 116 aa13.02□□□□□ -0.33
SUMO3-201ENST00000332859 SDIM1Q6ZPB5 146 aa13.02□□□□□ -0.33
SUMO3-201ENST00000332859 H3BQ85 93 aa13.01□□□□□ -0.33
SUMO3-201ENST00000332859 C14orf132Q9NPU4 83 aa13.01□□□□□ -0.33
SUMO3-201ENST00000332859 LOC107984640A0A0U1RRK4 108 aa13□□□□□ -0.33
SUMO3-201ENST00000332859 ZNF73O43830 326 aaPredicted RBP13□□□□□ -0.33
SUMO3-201ENST00000332859 LINC00643Q86TS7 51 aa12.99□□□□□ -0.33
SUMO3-201ENST00000332859 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.97□□□□□ -0.33
SUMO3-201ENST00000332859 COX7BP24311 80 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms