RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 TRAV12-1A0A0B4J245 112 aa13.67□□□□□ -0.22
TMEM54-201ENST00000329151 FAM19A1Q7Z5A9 133 aa13.67□□□□□ -0.22
TMEM54-201ENST00000329151 C11orf86A6NJI1 115 aa13.66□□□□□ -0.22
TMEM54-201ENST00000329151 LEPROTL1O95214 131 aa13.65□□□□□ -0.22
TMEM54-201ENST00000329151 ERG28Q9UKR5 140 aa13.65□□□□□ -0.22
TMEM54-201ENST00000329151 PRLHP81277 87 aa13.64□□□□□ -0.23
TMEM54-201ENST00000329151 TMEM170BQ5T4T1 132 aa13.64□□□□□ -0.23
TMEM54-201ENST00000329151 KRTAP13-1Q8IUC0 172 aa13.64□□□□□ -0.23
TMEM54-201ENST00000329151 IGLV5-39A0A0G2JS06 123 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST1H2BKO60814 126 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST1H2BJP06899 126 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST1H2BOP23527 126 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST1H2BBP33778 126 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST1H2BDP58876 126 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST1H2BCP62807 126 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST2H2BEQ16778 126 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 KRTAP13-2Q52LG2 175 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST1H2BHQ93079 126 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST1H2BNQ99877 126 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 HIST1H2BMQ99879 126 aa13.63□□□□□ -0.23
TMEM54-201ENST00000329151 COX17Q14061 63 aa13.62□□□□□ -0.23
TMEM54-201ENST00000329151 RETNLBQ9BQ08 111 aa13.62□□□□□ -0.23
TMEM54-201ENST00000329151 SND1-IT1Q9HBX3 110 aa13.62□□□□□ -0.23
TMEM54-201ENST00000329151 SFTA2Q6UW10 78 aa13.61□□□□□ -0.23
TMEM54-201ENST00000329151 TMEM126AQ9H061 195 aa13.61□□□□□ -0.23
TMEM54-201ENST00000329151 HSPB8Q9UJY1 196 aa13.61□□□□□ -0.23
TMEM54-201ENST00000329151 FABP4P15090 132 aa13.6□□□□□ -0.23
TMEM54-201ENST00000329151 S100A1P23297 94 aa13.6□□□□□ -0.23
TMEM54-201ENST00000329151 ZNF625Q96I27 306 aaPredicted RBP13.6□□□□□ -0.23
TMEM54-201ENST00000329151 CDIP1Q9H305 208 aa13.6□□□□□ -0.23
TMEM54-201ENST00000329151 H0Y8G0 127 aa13.59□□□□□ -0.23
TMEM54-201ENST00000329151 VPREB1P12018 145 aa13.59□□□□□ -0.23
TMEM54-201ENST00000329151 TMEM238C9JI98 176 aa13.58□□□□□ -0.24
TMEM54-201ENST00000329151 ATP6V1G1O75348 118 aa13.57□□□□□ -0.24
TMEM54-201ENST00000329151 TMEM223A0PJW6 202 aa13.55□□□□□ -0.24
TMEM54-201ENST00000329151 HIGD2AQ9BW72 106 aa13.55□□□□□ -0.24
TMEM54-201ENST00000329151 IGLV7-46A0A075B6I9 117 aa13.54□□□□□ -0.24
TMEM54-201ENST00000329151 LINC00158P58513 81 aa13.53□□□□□ -0.24
TMEM54-201ENST00000329151 CTAG1AP78358 180 aa13.53□□□□□ -0.24
TMEM54-201ENST00000329151 M0R378 163 aa13.52□□□□□ -0.25
TMEM54-201ENST00000329151 MAP1LC3CQ9BXW4 147 aa13.51□□□□□ -0.25
TMEM54-201ENST00000329151 PLNP26678 52 aa13.5□□□□□ -0.25
TMEM54-201ENST00000329151 TPRXLQ17RH7 258 aa13.5□□□□□ -0.25
TMEM54-201ENST00000329151 C4orf48Q5BLP8 95 aa13.5□□□□□ -0.25
TMEM54-201ENST00000329151 PLEKHB2Q96CS7 222 aa13.5□□□□□ -0.25
TMEM54-201ENST00000329151 ZNF706Q9Y5V0 76 aaPredicted RBP13.49□□□□□ -0.25
TMEM54-201ENST00000329151 DPM2O94777 84 aa13.48□□□□□ -0.25
TMEM54-201ENST00000329151 COA6Q5JTJ3 125 aaKnown RBP13.48□□□□□ -0.25
TMEM54-201ENST00000329151 PMCHL2Q9BQD1 86 aa13.48□□□□□ -0.25
TMEM54-201ENST00000329151 A0A0U1RRA0 63 aa13.47□□□□□ -0.25
TMEM54-201ENST00000329151 SPAG11AQ6PDA7 123 aa13.47□□□□□ -0.25
TMEM54-201ENST00000329151 C3orf22Q8N5N4 141 aa13.46□□□□□ -0.25
TMEM54-201ENST00000329151 IGKCP01834 107 aa13.45□□□□□ -0.26
TMEM54-201ENST00000329151 MEIG1Q5JSS6 88 aa13.44□□□□□ -0.26
TMEM54-201ENST00000329151 SYS1-DBNDD2H3BUS1 97 aa13.43□□□□□ -0.26
TMEM54-201ENST00000329151 Q8NDZ9 215 aa13.43□□□□□ -0.26
TMEM54-201ENST00000329151 PPDPFQ9H3Y8 114 aa13.43□□□□□ -0.26
TMEM54-201ENST00000329151 S100A12P80511 92 aa13.42□□□□□ -0.26
TMEM54-201ENST00000329151 SPRR4Q96PI1 79 aa13.42□□□□□ -0.26
TMEM54-201ENST00000329151 PRYO14603 147 aa13.4□□□□□ -0.26
TMEM54-201ENST00000329151 LEPROTO15243 131 aa13.4□□□□□ -0.26
TMEM54-201ENST00000329151 HERVK_113P61574 105 aa13.4□□□□□ -0.26
TMEM54-201ENST00000329151 BOD1L2Q8IYS8 172 aa13.4□□□□□ -0.26
TMEM54-201ENST00000329151 LINC00337Q8N6G1 96 aa13.39□□□□□ -0.27
TMEM54-201ENST00000329151 NDUFA12Q9UI09 145 aa13.39□□□□□ -0.27
TMEM54-201ENST00000329151 ETDCA0A1B0GVM5 59 aa13.38□□□□□ -0.27
TMEM54-201ENST00000329151 SMIM13P0DJ93 91 aa13.38□□□□□ -0.27
TMEM54-201ENST00000329151 HERV-K104P63124 156 aa13.38□□□□□ -0.27
TMEM54-201ENST00000329151 PET117Q6UWS5 81 aa13.38□□□□□ -0.27
TMEM54-201ENST00000329151 MYMXA0A1B0GTQ4 84 aa13.37□□□□□ -0.27
TMEM54-201ENST00000329151 LINC00587B1AMM8 73 aa13.37□□□□□ -0.27
TMEM54-201ENST00000329151 TSPEAR-AS2P59090 65 aa13.37□□□□□ -0.27
TMEM54-201ENST00000329151 NCR3O14931 201 aa13.36□□□□□ -0.27
TMEM54-201ENST00000329151 C3orf79P0CE67 100 aa13.36□□□□□ -0.27
TMEM54-201ENST00000329151 LINC01545Q5VT33 79 aa13.36□□□□□ -0.27
TMEM54-201ENST00000329151 FP248Q71RG6 208 aaPredicted RBP13.36□□□□□ -0.27
TMEM54-201ENST00000329151 KRTAP9-2Q9BYQ4 174 aa13.36□□□□□ -0.27
TMEM54-201ENST00000329151 FAT4Q6V0I7 4981 aa13.36□□□□□ -0.27
TMEM54-201ENST00000329151 J3QQQ9 107 aa13.35□□□□□ -0.27
TMEM54-201ENST00000329151 KRTDAPP60985 99 aa13.34□□□□□ -0.27
TMEM54-201ENST00000329151 MIR7-3HGQ8N6C7 128 aa13.34□□□□□ -0.27
TMEM54-201ENST00000329151 Q8NBF4 154 aa13.33□□□□□ -0.28
TMEM54-201ENST00000329151 LGALS3P17931 250 aaKnown RBP13.32□□□□□ -0.28
TMEM54-201ENST00000329151 DAND5Q8N907 189 aa13.32□□□□□ -0.28
TMEM54-201ENST00000329151 SMCR5Q8TEV8 140 aa13.32□□□□□ -0.28
TMEM54-201ENST00000329151 MUC17Q685J3 4493 aa13.32□□□□□ -0.28
TMEM54-201ENST00000329151 E9PLD3 99 aa13.3□□□□□ -0.28
TMEM54-201ENST00000329151 NMUP48645 174 aa13.3□□□□□ -0.28
TMEM54-201ENST00000329151 LCE2AQ5TA79 106 aaPredicted RBP13.3□□□□□ -0.28
TMEM54-201ENST00000329151 KCNQ1DNQ9H478 68 aa13.3□□□□□ -0.28
TMEM54-201ENST00000329151 SPINK1P00995 79 aa13.28□□□□□ -0.28
TMEM54-201ENST00000329151 TRBV10-3A0A0K0K1G6 114 aa13.27□□□□□ -0.29
TMEM54-201ENST00000329151 C20orf202A1L168 122 aa13.26□□□□□ -0.29
TMEM54-201ENST00000329151 GAGE2AQ6NT46 116 aa13.26□□□□□ -0.29
TMEM54-201ENST00000329151 SPRR1AP35321 89 aa13.25□□□□□ -0.29
TMEM54-201ENST00000329151 HIST3H2BBQ8N257 126 aa13.25□□□□□ -0.29
TMEM54-201ENST00000329151 S100A6P06703 90 aa13.24□□□□□ -0.29
TMEM54-201ENST00000329151 MIEN1Q9BRT3 115 aa13.24□□□□□ -0.29
TMEM54-201ENST00000329151 S100A2P29034 98 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms