RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 LINC00518Q8N0U6 118 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 PLAC8Q9NZF1 115 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 NDUFA12Q9UI09 145 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 ERG28Q9UKR5 140 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 STAB2Q8WWQ8 2551 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 ABCA13Q86UQ4 5058 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 SCGB1D1O95968 90 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 OPRPNQ99935 248 aaPredicted RBP2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 TRBV7-6A0A0J9YX20 115 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 IGKV2-30P06310 120 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 MEIG1Q5JSS6 88 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 SPACA4Q8TDM5 124 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 H3BQ85 93 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 SPINK8P0C7L1 97 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 SLC25A34Q6PIV7 304 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 C5orf38Q86SI9 138 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 MAPKAPK5-AS1Q8N8E1 139 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 C6orf48Q9UBA6 75 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 UQCR10Q9UDW1 63 aa2.12□□□□□ -2.07
SCAMP1-201ENST00000320280 LOC105371267A0A1B0GV96 52 aa2.11□□□□□ -2.07
SCAMP1-201ENST00000320280 CLPSL2Q6UWE3 100 aa2.11□□□□□ -2.07
SCAMP1-201ENST00000320280 SDIM1Q6ZPB5 146 aa2.11□□□□□ -2.07
SCAMP1-201ENST00000320280 Q6ZRU5 148 aa2.11□□□□□ -2.07
SCAMP1-201ENST00000320280 DNAH8Q96JB1 4490 aa2.11□□□□□ -2.07
SCAMP1-201ENST00000320280 ZNF815PA8K554 130 aa2.11□□□□□ -2.07
SCAMP1-201ENST00000320280 H0Y9J4 135 aa2.11□□□□□ -2.07
SCAMP1-201ENST00000320280 PRYO14603 147 aa2.11□□□□□ -2.07
SCAMP1-201ENST00000320280 SPATA45Q537H7 98 aa2.11□□□□□ -2.07
SCAMP1-201ENST00000320280 RNASE13Q5GAN3 156 aaKnown RBP2.11□□□□□ -2.07
SCAMP1-201ENST00000320280 IGKV3OR2-268A0A0C4DH90 116 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 A4D1N5 150 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 TSTD3H0UI37 97 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 M0R2N4 97 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 HSD52Q0P140 79 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 PYY3Q5JQD4 70 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 NBEAL2Q6ZNJ1 2754 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 TRAV13-2A0A0B4J235 113 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 A0A0B4J2C4 111 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 M0R143 59 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 M0R378 163 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 LITAFQ99732 161 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 DNAH11Q96DT5 4516 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 A0A1B0GX51 115 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 C7orf33Q8WU49 177 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 MIEN1Q9BRT3 115 aa2.1□□□□□ -2.07
SCAMP1-201ENST00000320280 PPDPFLQ8WWR9 84 aa2.09□□□□□ -2.07
SCAMP1-201ENST00000320280 TOMM7Q9P0U1 55 aa2.09□□□□□ -2.07
SCAMP1-201ENST00000320280 INAFM2P0DMQ5 153 aa2.09□□□□□ -2.07
SCAMP1-201ENST00000320280 TSPEAR-AS2P59090 65 aa2.09□□□□□ -2.07
SCAMP1-201ENST00000320280 UNQ6190/PRO20217Q6UXQ8 127 aa2.09□□□□□ -2.07
SCAMP1-201ENST00000320280 SCGB1D4Q6XE38 83 aa2.09□□□□□ -2.07
SCAMP1-201ENST00000320280 LINC00337Q8N6G1 96 aa2.09□□□□□ -2.07
SCAMP1-201ENST00000320280 A0A1B0GWB2 263 aa2.09□□□□□ -2.08
SCAMP1-201ENST00000320280 H0Y8G0 127 aa2.09□□□□□ -2.08
SCAMP1-201ENST00000320280 VPREB1P12018 145 aa2.09□□□□□ -2.08
SCAMP1-201ENST00000320280 WFDC2Q14508 124 aa2.09□□□□□ -2.08
SCAMP1-201ENST00000320280 HIGD2BQ4VC39 106 aa2.09□□□□□ -2.08
SCAMP1-201ENST00000320280 STPG4Q8N801 248 aa2.09□□□□□ -2.08
SCAMP1-201ENST00000320280 LINC00308Q8TCZ7 52 aa2.09□□□□□ -2.08
SCAMP1-201ENST00000320280 SND1-IT1Q9HBX3 110 aa2.09□□□□□ -2.08
SCAMP1-201ENST00000320280 NHP2Q9NX24 153 aaKnown RBP2.09□□□□□ -2.08
SCAMP1-201ENST00000320280 LINC00158P58513 81 aa2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 LYRM7Q5U5X0 104 aa2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 NKAPP1Q8N9T2 125 aa2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 TMEM126AQ9H061 195 aa2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 TMA7Q9Y2S6 64 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 SPRR1AP35321 89 aa2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 Q6ZRP5 223 aa2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 KCNQ1DNQ9H478 68 aa2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 SNCGO76070 127 aa2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 IGLV6-57P01721 117 aa2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 RPL18AQ02543 176 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 MRPL55Q7Z7F7 128 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 MIR7-3HGQ8N6C7 128 aa2.08□□□□□ -2.08
SCAMP1-201ENST00000320280 A0A096LNI7 61 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 SMIM13P0DJ93 91 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 OCIAD2Q56VL3 154 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 C10orf25Q5T742 122 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 CEND1Q8N111 149 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 ZNF706Q9Y5V0 76 aaPredicted RBP2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 A6NDN8 102 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 RPL37AP8A6NKH3 93 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 TRIAP1O43715 76 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 HNRNPA3P51991 378 aaKnown RBP2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 C9orf129Q5T035 196 aaKnown RBP2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 C2orf91Q6ZV80 131 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 DEFB104AQ8WTQ1 72 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 IGLV1-50A0A075B6I6 118 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 M0QXV9 152 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 RPL37AP61513 92 aaKnown RBP2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 SRSF9Q13242 221 aaKnown RBP eCLIP2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 BVES-AS1Q5T3Y7 98 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 C2orf82Q6UX34 121 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 C12orf57Q99622 126 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 PAM16Q9Y3D7 125 aa2.07□□□□□ -2.08
SCAMP1-201ENST00000320280 KRTAP29-1A8MX34 341 aaPredicted RBP2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 H0YGX0 51 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 HINT1P49773 126 aaPredicted RBP2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 MAJINQ3KP22 176 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 HIST1H4GQ99525 98 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms