RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 STAB2Q8WWQ8 2551 aa9.6□□□□□ -0.87
VRK3-201ENST00000316763 PRR34Q9NV39 138 aa9.59□□□□□ -0.87
VRK3-201ENST00000316763 DEFB131BA0A096LNP1 70 aa9.58□□□□□ -0.88
VRK3-201ENST00000316763 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
VRK3-201ENST00000316763 TTC32Q5I0X7 151 aa9.58□□□□□ -0.88
VRK3-201ENST00000316763 ANAPC13Q9BS18 74 aa9.58□□□□□ -0.88
VRK3-201ENST00000316763 KLK12Q9UKR0 248 aa9.58□□□□□ -0.88
VRK3-201ENST00000316763 C22orf24Q9Y442 160 aa9.58□□□□□ -0.88
VRK3-201ENST00000316763 LECT2O14960 151 aa9.58□□□□□ -0.88
VRK3-201ENST00000316763 LYPD5Q6UWN5 251 aa9.58□□□□□ -0.88
VRK3-201ENST00000316763 TMEM126AQ9H061 195 aa9.58□□□□□ -0.88
VRK3-201ENST00000316763 A0A1B0GX51 115 aa9.56□□□□□ -0.88
VRK3-201ENST00000316763 TRAV10A0A0B4J240 114 aa9.56□□□□□ -0.88
VRK3-201ENST00000316763 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
VRK3-201ENST00000316763 ORMDL1Q9P0S3 153 aa9.55□□□□□ -0.88
VRK3-201ENST00000316763 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
VRK3-201ENST00000316763 NDUFV3P56181 108 aaKnown RBP9.54□□□□□ -0.88
VRK3-201ENST00000316763 PRR3P79522 188 aaKnown RBP9.54□□□□□ -0.88
VRK3-201ENST00000316763 GAGE2AQ6NT46 116 aa9.54□□□□□ -0.88
VRK3-201ENST00000316763 UNQ6190/PRO20217Q6UXQ8 127 aa9.54□□□□□ -0.88
VRK3-201ENST00000316763 LINC00643Q86TS7 51 aa9.53□□□□□ -0.88
VRK3-201ENST00000316763 TRBV7-7A0A0K0K1E9 115 aa9.52□□□□□ -0.88
VRK3-201ENST00000316763 S100A7L2Q5SY68 101 aa9.52□□□□□ -0.88
VRK3-201ENST00000316763 C6orf223Q8N319 242 aa9.52□□□□□ -0.88
VRK3-201ENST00000316763 C10orf25Q5T742 122 aa9.52□□□□□ -0.89
VRK3-201ENST00000316763 OBSCN-AS1Q96MR7 158 aa9.52□□□□□ -0.89
VRK3-201ENST00000316763 IMUPQ9GZP8 106 aa9.52□□□□□ -0.89
VRK3-201ENST00000316763 GVQW2A0A096LPI5 108 aaPredicted RBP9.51□□□□□ -0.89
VRK3-201ENST00000316763 NCR3O14931 201 aa9.51□□□□□ -0.89
VRK3-201ENST00000316763 LINC00167Q96N53 147 aa9.51□□□□□ -0.89
VRK3-201ENST00000316763 SLPIP03973 132 aa9.5□□□□□ -0.89
VRK3-201ENST00000316763 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
VRK3-201ENST00000316763 Q8N814 137 aa9.5□□□□□ -0.89
VRK3-201ENST00000316763 WWC2-AS2Q96NR7 200 aa9.49□□□□□ -0.89
VRK3-201ENST00000316763 LINC00526Q96FQ7 95 aa9.48□□□□□ -0.89
VRK3-201ENST00000316763 C14orf132Q9NPU4 83 aa9.48□□□□□ -0.89
VRK3-201ENST00000316763 TMEM256-PLSCR3K7ERE1 68 aa9.48□□□□□ -0.89
VRK3-201ENST00000316763 ESRGQ1W209 222 aa9.48□□□□□ -0.89
VRK3-201ENST00000316763 SMCR5Q8TEV8 140 aa9.48□□□□□ -0.89
VRK3-201ENST00000316763 C6orf99Q4VX62 202 aa9.47□□□□□ -0.89
VRK3-201ENST00000316763 WFDC10BQ8IUB3 73 aa9.47□□□□□ -0.89
VRK3-201ENST00000316763 JMJD7-PLA2G4BH0Y9G9 81 aa9.46□□□□□ -0.89
VRK3-201ENST00000316763 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.89
VRK3-201ENST00000316763 C9orf129Q5T035 196 aaKnown RBP9.46□□□□□ -0.9
VRK3-201ENST00000316763 Q8NDZ9 215 aa9.46□□□□□ -0.9
VRK3-201ENST00000316763 C6orf48Q9UBA6 75 aa9.45□□□□□ -0.9
VRK3-201ENST00000316763 DNAH7Q8WXX0 4024 aa9.44□□□□□ -0.9
VRK3-201ENST00000316763 IGLV6-57P01721 117 aa9.44□□□□□ -0.9
VRK3-201ENST00000316763 LINC00575Q6W349 94 aa9.44□□□□□ -0.9
VRK3-201ENST00000316763 CAMK2N2Q96S95 79 aa9.44□□□□□ -0.9
VRK3-201ENST00000316763 RPL18AQ02543 176 aaKnown RBP9.43□□□□□ -0.9
VRK3-201ENST00000316763 CSMD3Q7Z407 3707 aa9.42□□□□□ -0.9
VRK3-201ENST00000316763 hADV29S1A0JD25 119 aa9.42□□□□□ -0.9
VRK3-201ENST00000316763 NUPR2A6NF83 97 aa9.42□□□□□ -0.9
VRK3-201ENST00000316763 CCKP06307 115 aa9.41□□□□□ -0.9
VRK3-201ENST00000316763 HIGD2BQ4VC39 106 aa9.41□□□□□ -0.9
VRK3-201ENST00000316763 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
VRK3-201ENST00000316763 C2orf48Q96LS8 159 aa9.41□□□□□ -0.9
VRK3-201ENST00000316763 C1orf43Q9BWL3 253 aa9.41□□□□□ -0.9
VRK3-201ENST00000316763 H3BQ85 93 aa9.41□□□□□ -0.9
VRK3-201ENST00000316763 LINC01556Q5JQF7 62 aa9.41□□□□□ -0.9
VRK3-201ENST00000316763 F8WDY8 70 aa9.4□□□□□ -0.9
VRK3-201ENST00000316763 LINC00588Q9Y4M8 146 aa9.4□□□□□ -0.9
VRK3-201ENST00000316763 FAM236AA0A1B0GUQ0 79 aa9.39□□□□□ -0.91
VRK3-201ENST00000316763 FAM236BA0A1B0GV22 79 aa9.39□□□□□ -0.91
VRK3-201ENST00000316763 XAGE1AQ9HD64 81 aa9.39□□□□□ -0.91
VRK3-201ENST00000316763 TRAV23DV6A0A075B6W5 121 aa9.39□□□□□ -0.91
VRK3-201ENST00000316763 DIRC1Q969H9 104 aa9.39□□□□□ -0.91
VRK3-201ENST00000316763 TRBV10-3A0A0K0K1G6 114 aa9.38□□□□□ -0.91
VRK3-201ENST00000316763 DNAH10OSP0CZ25 163 aa9.38□□□□□ -0.91
VRK3-201ENST00000316763 Q6JHZ5 121 aa9.38□□□□□ -0.91
VRK3-201ENST00000316763 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
VRK3-201ENST00000316763 APLNQ9ULZ1 77 aa9.38□□□□□ -0.91
VRK3-201ENST00000316763 C3orf84H3BNL1 204 aa9.37□□□□□ -0.91
VRK3-201ENST00000316763 CASC10Q5T4H9 136 aa9.37□□□□□ -0.91
VRK3-201ENST00000316763 C15orf56Q8N910 161 aa9.37□□□□□ -0.91
VRK3-201ENST00000316763 UPK3BQ9BT76 320 aa9.37□□□□□ -0.91
VRK3-201ENST00000316763 Q6ZRU5 148 aa9.37□□□□□ -0.91
VRK3-201ENST00000316763 IGKV2D-24A0A075B6R9 120 aa9.36□□□□□ -0.91
VRK3-201ENST00000316763 CCDC179H3BU77 68 aa9.36□□□□□ -0.91
VRK3-201ENST00000316763 TENM2Q9NT68 2774 aa9.36□□□□□ -0.91
VRK3-201ENST00000316763 NDUFC2-KCTD14E9PQ53 114 aa9.35□□□□□ -0.91
VRK3-201ENST00000316763 M0R378 163 aa9.35□□□□□ -0.91
VRK3-201ENST00000316763 GHRHP01286 108 aa9.35□□□□□ -0.91
VRK3-201ENST00000316763 DYNC2H1Q8NCM8 4307 aaKnown RBP9.35□□□□□ -0.91
VRK3-201ENST00000316763 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
VRK3-201ENST00000316763 TRBV7-6A0A0J9YX20 115 aa9.35□□□□□ -0.91
VRK3-201ENST00000316763 VPREB1P12018 145 aa9.35□□□□□ -0.91
VRK3-201ENST00000316763 B5MCH6 92 aa9.34□□□□□ -0.91
VRK3-201ENST00000316763 ZNF73O43830 326 aaPredicted RBP9.34□□□□□ -0.91
VRK3-201ENST00000316763 COX7BP24311 80 aa9.34□□□□□ -0.91
VRK3-201ENST00000316763 RBM3P98179 157 aaKnown RBP9.34□□□□□ -0.91
VRK3-201ENST00000316763 LAMTOR3Q9UHA4 124 aa9.34□□□□□ -0.91
VRK3-201ENST00000316763 SYCNQ0VAF6 134 aa9.32□□□□□ -0.92
VRK3-201ENST00000316763 Q6ZQY7 126 aa9.32□□□□□ -0.92
VRK3-201ENST00000316763 IGKV3D-7A0A0C4DH55 119 aa9.31□□□□□ -0.92
VRK3-201ENST00000316763 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.31□□□□□ -0.92
VRK3-201ENST00000316763 ELOF1P60002 83 aaKnown RBP9.31□□□□□ -0.92
VRK3-201ENST00000316763 LOC110117498A0A087WWA1 95 aa9.3□□□□□ -0.92
VRK3-201ENST00000316763 PDE6GP18545 87 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms