RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 DNAH9Q9NYC9 4486 aa9.64□□□□□ -0.87
RAB40A-201ENST00000304236 C3orf84H3BNL1 204 aa9.64□□□□□ -0.87
RAB40A-201ENST00000304236 Q8N3U1 123 aa9.64□□□□□ -0.87
RAB40A-201ENST00000304236 TENM3Q9P273 2699 aa9.63□□□□□ -0.87
RAB40A-201ENST00000304236 OBSCN-AS1Q96MR7 158 aa9.63□□□□□ -0.87
RAB40A-201ENST00000304236 PRR34Q9NV39 138 aa9.63□□□□□ -0.87
RAB40A-201ENST00000304236 NBEAL2Q6ZNJ1 2754 aa9.63□□□□□ -0.87
RAB40A-201ENST00000304236 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
RAB40A-201ENST00000304236 SPAG11BQ08648 103 aa9.62□□□□□ -0.87
RAB40A-201ENST00000304236 LINC00167Q96N53 147 aa9.62□□□□□ -0.87
RAB40A-201ENST00000304236 GAGE2AQ6NT46 116 aa9.61□□□□□ -0.87
RAB40A-201ENST00000304236 A0A0J9YWU9 116 aa9.61□□□□□ -0.87
RAB40A-201ENST00000304236 NANOS2P60321 138 aaKnown RBP9.61□□□□□ -0.87
RAB40A-201ENST00000304236 H3BNG1 76 aa9.6□□□□□ -0.87
RAB40A-201ENST00000304236 LYPD5Q6UWN5 251 aa9.6□□□□□ -0.87
RAB40A-201ENST00000304236 KLK12Q9UKR0 248 aa9.6□□□□□ -0.87
RAB40A-201ENST00000304236 SMCR5Q8TEV8 140 aa9.59□□□□□ -0.87
RAB40A-201ENST00000304236 C9orf116Q5BN46 136 aaPredicted RBP9.59□□□□□ -0.87
RAB40A-201ENST00000304236 KMT2CQ8NEZ4 4911 aaKnown RBP9.59□□□□□ -0.87
RAB40A-201ENST00000304236 GVQW2A0A096LPI5 108 aaPredicted RBP9.58□□□□□ -0.88
RAB40A-201ENST00000304236 PRR3P79522 188 aaKnown RBP9.58□□□□□ -0.88
RAB40A-201ENST00000304236 Q8N814 137 aa9.58□□□□□ -0.88
RAB40A-201ENST00000304236 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
RAB40A-201ENST00000304236 UNQ6190/PRO20217Q6UXQ8 127 aa9.57□□□□□ -0.88
RAB40A-201ENST00000304236 S100A7L2Q5SY68 101 aa9.57□□□□□ -0.88
RAB40A-201ENST00000304236 TMEM256-PLSCR3K7ERE1 68 aa9.56□□□□□ -0.88
RAB40A-201ENST00000304236 SLPIP03973 132 aa9.56□□□□□ -0.88
RAB40A-201ENST00000304236 CASC10Q5T4H9 136 aa9.56□□□□□ -0.88
RAB40A-201ENST00000304236 C14orf132Q9NPU4 83 aa9.56□□□□□ -0.88
RAB40A-201ENST00000304236 JMJD7-PLA2G4BH0Y9G9 81 aa9.55□□□□□ -0.88
RAB40A-201ENST00000304236 C10orf25Q5T742 122 aa9.55□□□□□ -0.88
RAB40A-201ENST00000304236 C6orf223Q8N319 242 aa9.55□□□□□ -0.88
RAB40A-201ENST00000304236 NCR3O14931 201 aa9.55□□□□□ -0.88
RAB40A-201ENST00000304236 TM2D3Q9BRN9 247 aa9.55□□□□□ -0.88
RAB40A-201ENST00000304236 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
RAB40A-201ENST00000304236 STAB2Q8WWQ8 2551 aa9.54□□□□□ -0.88
RAB40A-201ENST00000304236 C6orf99Q4VX62 202 aa9.53□□□□□ -0.88
RAB40A-201ENST00000304236 Q8NDZ9 215 aa9.52□□□□□ -0.89
RAB40A-201ENST00000304236 SVIPQ8NHG7 77 aa9.52□□□□□ -0.89
RAB40A-201ENST00000304236 FAM236AA0A1B0GUQ0 79 aa9.51□□□□□ -0.89
RAB40A-201ENST00000304236 FAM236BA0A1B0GV22 79 aa9.51□□□□□ -0.89
RAB40A-201ENST00000304236 IGLV6-57P01721 117 aa9.51□□□□□ -0.89
RAB40A-201ENST00000304236 CCKP06307 115 aa9.51□□□□□ -0.89
RAB40A-201ENST00000304236 LINC00575Q6W349 94 aa9.51□□□□□ -0.89
RAB40A-201ENST00000304236 H3BQ85 93 aa9.5□□□□□ -0.89
RAB40A-201ENST00000304236 LINC00526Q96FQ7 95 aa9.5□□□□□ -0.89
RAB40A-201ENST00000304236 CCDC179H3BU77 68 aa9.5□□□□□ -0.89
RAB40A-201ENST00000304236 Q6JHZ5 121 aa9.5□□□□□ -0.89
RAB40A-201ENST00000304236 C6orf48Q9UBA6 75 aa9.5□□□□□ -0.89
RAB40A-201ENST00000304236 RYR3Q15413 4870 aa9.49□□□□□ -0.89
RAB40A-201ENST00000304236 ZNF561-AS1K7EIQ3 104 aa9.49□□□□□ -0.89
RAB40A-201ENST00000304236 hADV29S1A0JD25 119 aa9.48□□□□□ -0.89
RAB40A-201ENST00000304236 B5MCH6 92 aa9.48□□□□□ -0.89
RAB40A-201ENST00000304236 WFDC10BQ8IUB3 73 aa9.48□□□□□ -0.89
RAB40A-201ENST00000304236 RETNQ9HD89 108 aa9.48□□□□□ -0.89
RAB40A-201ENST00000304236 RPL18AQ02543 176 aaKnown RBP9.48□□□□□ -0.89
RAB40A-201ENST00000304236 Q6ZTC4 211 aa9.48□□□□□ -0.89
RAB40A-201ENST00000304236 LINC00846Q9NV44 126 aa9.48□□□□□ -0.89
RAB40A-201ENST00000304236 HUWE1Q7Z6Z7 4374 aaKnown RBP9.47□□□□□ -0.89
RAB40A-201ENST00000304236 C2orf48Q96LS8 159 aa9.46□□□□□ -0.89
RAB40A-201ENST00000304236 CAMK2N2Q96S95 79 aa9.46□□□□□ -0.89
RAB40A-201ENST00000304236 LCE6AA0A183 80 aa9.46□□□□□ -0.9
RAB40A-201ENST00000304236 F8WDY8 70 aa9.46□□□□□ -0.9
RAB40A-201ENST00000304236 KRTAP26-1Q6PEX3 210 aa9.46□□□□□ -0.9
RAB40A-201ENST00000304236 TRAV23DV6A0A075B6W5 121 aa9.44□□□□□ -0.9
RAB40A-201ENST00000304236 ESRGQ1W209 222 aa9.44□□□□□ -0.9
RAB40A-201ENST00000304236 DIRC1Q969H9 104 aa9.44□□□□□ -0.9
RAB40A-201ENST00000304236 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
RAB40A-201ENST00000304236 GHRHP01286 108 aa9.43□□□□□ -0.9
RAB40A-201ENST00000304236 LINC01556Q5JQF7 62 aa9.43□□□□□ -0.9
RAB40A-201ENST00000304236 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
RAB40A-201ENST00000304236 HIST1H4AP62805 103 aaKnown RBP9.43□□□□□ -0.9
RAB40A-201ENST00000304236 HIGD2BQ4VC39 106 aa9.43□□□□□ -0.9
RAB40A-201ENST00000304236 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
RAB40A-201ENST00000304236 XAGE1AQ9HD64 81 aa9.43□□□□□ -0.9
RAB40A-201ENST00000304236 TENM2Q9NT68 2774 aa9.42□□□□□ -0.9
RAB40A-201ENST00000304236 RBM3P98179 157 aaKnown RBP9.42□□□□□ -0.9
RAB40A-201ENST00000304236 DEFB131BA0A096LNP1 70 aa9.41□□□□□ -0.9
RAB40A-201ENST00000304236 ATOX1O00244 68 aa9.41□□□□□ -0.9
RAB40A-201ENST00000304236 ATP5EP2Q5VTU8 51 aa9.41□□□□□ -0.9
RAB40A-201ENST00000304236 C11orf45Q8TAV5 145 aa9.41□□□□□ -0.9
RAB40A-201ENST00000304236 IGKV3D-7A0A0C4DH55 119 aa9.41□□□□□ -0.9
RAB40A-201ENST00000304236 M0R378 163 aa9.41□□□□□ -0.9
RAB40A-201ENST00000304236 C15orf56Q8N910 161 aa9.41□□□□□ -0.9
RAB40A-201ENST00000304236 LOC110117498A0A087WWA1 95 aa9.4□□□□□ -0.9
RAB40A-201ENST00000304236 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.9
RAB40A-201ENST00000304236 ZNF73O43830 326 aaPredicted RBP9.4□□□□□ -0.9
RAB40A-201ENST00000304236 VPREB1P12018 145 aa9.4□□□□□ -0.9
RAB40A-201ENST00000304236 UQCRQO14949 82 aa9.39□□□□□ -0.91
RAB40A-201ENST00000304236 PDE6GP18545 87 aa9.39□□□□□ -0.91
RAB40A-201ENST00000304236 COX7BP24311 80 aa9.39□□□□□ -0.91
RAB40A-201ENST00000304236 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.39□□□□□ -0.91
RAB40A-201ENST00000304236 Q6ZRU5 148 aa9.39□□□□□ -0.91
RAB40A-201ENST00000304236 C3orf22Q8N5N4 141 aa9.39□□□□□ -0.91
RAB40A-201ENST00000304236 SS18L2Q9UHA2 77 aa9.39□□□□□ -0.91
RAB40A-201ENST00000304236 LAMTOR3Q9UHA4 124 aa9.39□□□□□ -0.91
RAB40A-201ENST00000304236 Q6ZQY7 126 aa9.38□□□□□ -0.91
RAB40A-201ENST00000304236 ELOF1P60002 83 aaKnown RBP9.37□□□□□ -0.91
RAB40A-201ENST00000304236 Q6ZQT0 140 aa9.37□□□□□ -0.91
RAB40A-201ENST00000304236 UBL5Q9BZL1 73 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms