RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 Q6Q795 121 aa12.55□□□□□ -0.4
RNF139-201ENST00000303545 SMCR5Q8TEV8 140 aa12.54□□□□□ -0.4
RNF139-201ENST00000303545 C14orf132Q9NPU4 83 aa12.54□□□□□ -0.4
RNF139-201ENST00000303545 ESRGQ1W209 222 aa12.54□□□□□ -0.4
RNF139-201ENST00000303545 XAGE1AQ9HD64 81 aa12.53□□□□□ -0.4
RNF139-201ENST00000303545 FAM240AA0A1B0GVK7 77 aa12.52□□□□□ -0.4
RNF139-201ENST00000303545 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
RNF139-201ENST00000303545 EGFEM1PQ0D2K5 195 aa12.52□□□□□ -0.41
RNF139-201ENST00000303545 S100A7L2Q5SY68 101 aa12.52□□□□□ -0.41
RNF139-201ENST00000303545 DNAH3Q8TD57 4116 aa12.51□□□□□ -0.41
RNF139-201ENST00000303545 RPL18AQ02543 176 aaKnown RBP12.51□□□□□ -0.41
RNF139-201ENST00000303545 C6orf99Q4VX62 202 aa12.51□□□□□ -0.41
RNF139-201ENST00000303545 C6orf48Q9UBA6 75 aa12.51□□□□□ -0.41
RNF139-201ENST00000303545 TMEM126AQ9H061 195 aa12.5□□□□□ -0.41
RNF139-201ENST00000303545 NDUFC2O95298 119 aa12.5□□□□□ -0.41
RNF139-201ENST00000303545 DEFB131BA0A096LNP1 70 aa12.49□□□□□ -0.41
RNF139-201ENST00000303545 C11orf45Q8TAV5 145 aa12.48□□□□□ -0.41
RNF139-201ENST00000303545 BAHCC1Q9P281 2608 aa12.48□□□□□ -0.41
RNF139-201ENST00000303545 ORMDL1Q9P0S3 153 aa12.47□□□□□ -0.41
RNF139-201ENST00000303545 INAFM2P0DMQ5 153 aa12.46□□□□□ -0.41
RNF139-201ENST00000303545 ZNF561-AS1K7EIQ3 104 aa12.46□□□□□ -0.42
RNF139-201ENST00000303545 Q8N814 137 aa12.46□□□□□ -0.42
RNF139-201ENST00000303545 MRAPQ8TCY5 172 aa12.46□□□□□ -0.42
RNF139-201ENST00000303545 CAMK2N2Q96S95 79 aa12.45□□□□□ -0.42
RNF139-201ENST00000303545 ACYP1P07311 99 aa12.44□□□□□ -0.42
RNF139-201ENST00000303545 IGKV2D-24A0A075B6R9 120 aa12.43□□□□□ -0.42
RNF139-201ENST00000303545 KRTAP26-1Q6PEX3 210 aa12.43□□□□□ -0.42
RNF139-201ENST00000303545 SMIM20Q8N5G0 67 aa12.43□□□□□ -0.42
RNF139-201ENST00000303545 H3BNG1 76 aa12.42□□□□□ -0.42
RNF139-201ENST00000303545 Q6ZRU5 148 aa12.41□□□□□ -0.42
RNF139-201ENST00000303545 C15orf56Q8N910 161 aa12.41□□□□□ -0.42
RNF139-201ENST00000303545 TRBV10-3A0A0K0K1G6 114 aa12.4□□□□□ -0.42
RNF139-201ENST00000303545 C1orf43Q9BWL3 253 aa12.39□□□□□ -0.43
RNF139-201ENST00000303545 OBSCN-AS1Q96MR7 158 aa12.39□□□□□ -0.43
RNF139-201ENST00000303545 TRBV7-7A0A0K0K1E9 115 aa12.38□□□□□ -0.43
RNF139-201ENST00000303545 GVQW2A0A096LPI5 108 aaPredicted RBP12.37□□□□□ -0.43
RNF139-201ENST00000303545 IGLV6-57P01721 117 aa12.37□□□□□ -0.43
RNF139-201ENST00000303545 LINC00575Q6W349 94 aa12.37□□□□□ -0.43
RNF139-201ENST00000303545 LINC00643Q86TS7 51 aa12.37□□□□□ -0.43
RNF139-201ENST00000303545 LINC00167Q96N53 147 aa12.37□□□□□ -0.43
RNF139-201ENST00000303545 LINC00846Q9NV44 126 aa12.36□□□□□ -0.43
RNF139-201ENST00000303545 HUWE1Q7Z6Z7 4374 aaKnown RBP12.35□□□□□ -0.43
RNF139-201ENST00000303545 MGAM2Q2M2H8 2515 aa12.34□□□□□ -0.43
RNF139-201ENST00000303545 SDIM1Q6ZPB5 146 aa12.34□□□□□ -0.43
RNF139-201ENST00000303545 FAM236AA0A1B0GUQ0 79 aa12.34□□□□□ -0.43
RNF139-201ENST00000303545 FAM236BA0A1B0GV22 79 aa12.34□□□□□ -0.43
RNF139-201ENST00000303545 hADV29S1A0JD25 119 aa12.34□□□□□ -0.43
RNF139-201ENST00000303545 LINC01556Q5JQF7 62 aa12.34□□□□□ -0.43
RNF139-201ENST00000303545 LYSTQ99698 3801 aa12.33□□□□□ -0.43
RNF139-201ENST00000303545 IGKV3D-7A0A0C4DH55 119 aa12.33□□□□□ -0.44
RNF139-201ENST00000303545 TRAV23DV6A0A075B6W5 121 aa12.33□□□□□ -0.44
RNF139-201ENST00000303545 TMEM256-PLSCR3K7ERE1 68 aa12.32□□□□□ -0.44
RNF139-201ENST00000303545 A0A1B0GX51 115 aa12.31□□□□□ -0.44
RNF139-201ENST00000303545 Q6ZRP5 223 aa12.31□□□□□ -0.44
RNF139-201ENST00000303545 CASC10Q5T4H9 136 aa12.3□□□□□ -0.44
RNF139-201ENST00000303545 Q6ZQY7 126 aa12.3□□□□□ -0.44
RNF139-201ENST00000303545 MUC7Q8TAX7 377 aa12.3□□□□□ -0.44
RNF139-201ENST00000303545 K7EIL1 84 aa12.3□□□□□ -0.44
RNF139-201ENST00000303545 VPREB1P12018 145 aa12.3□□□□□ -0.44
RNF139-201ENST00000303545 LINC00588Q9Y4M8 146 aa12.3□□□□□ -0.44
RNF139-201ENST00000303545 NDUFC2-KCTD14E9PQ53 114 aa12.28□□□□□ -0.44
RNF139-201ENST00000303545 IMUPQ9GZP8 106 aa12.28□□□□□ -0.44
RNF139-201ENST00000303545 COL7A1Q02388 2944 aa12.28□□□□□ -0.44
RNF139-201ENST00000303545 ZNF73O43830 326 aaPredicted RBP12.28□□□□□ -0.44
RNF139-201ENST00000303545 CCKP06307 115 aa12.28□□□□□ -0.44
RNF139-201ENST00000303545 DIRC1Q969H9 104 aa12.28□□□□□ -0.44
RNF139-201ENST00000303545 LAMTOR3Q9UHA4 124 aa12.28□□□□□ -0.44
RNF139-201ENST00000303545 TRAV10A0A0B4J240 114 aa12.26□□□□□ -0.45
RNF139-201ENST00000303545 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
RNF139-201ENST00000303545 JMJD7-PLA2G4BH0Y9G9 81 aa12.25□□□□□ -0.45
RNF139-201ENST00000303545 C2orf48Q96LS8 159 aa12.25□□□□□ -0.45
RNF139-201ENST00000303545 DNAH10OSP0CZ25 163 aa12.24□□□□□ -0.45
RNF139-201ENST00000303545 A0A087WVE0 104 aa12.23□□□□□ -0.45
RNF139-201ENST00000303545 M0R2N4 97 aa12.23□□□□□ -0.45
RNF139-201ENST00000303545 COX7BP24311 80 aa12.23□□□□□ -0.45
RNF139-201ENST00000303545 TM2D3Q9BRN9 247 aa12.23□□□□□ -0.45
RNF139-201ENST00000303545 DNAH1Q9P2D7 4330 aa12.22□□□□□ -0.45
RNF139-201ENST00000303545 M0R378 163 aa12.22□□□□□ -0.45
RNF139-201ENST00000303545 SERTAD4-AS1Q5TG53 156 aa12.21□□□□□ -0.45
RNF139-201ENST00000303545 RBM3P98179 157 aaKnown RBP12.21□□□□□ -0.46
RNF139-201ENST00000303545 STAB2Q8WWQ8 2551 aa12.21□□□□□ -0.46
RNF139-201ENST00000303545 DNAH10Q8IVF4 4471 aa12.2□□□□□ -0.46
RNF139-201ENST00000303545 C9orf153Q5TBE3 101 aa12.2□□□□□ -0.46
RNF139-201ENST00000303545 C3orf22Q8N5N4 141 aa12.2□□□□□ -0.46
RNF139-201ENST00000303545 USP17L23D6RBM5 183 aa12.19□□□□□ -0.46
RNF139-201ENST00000303545 ELOF1P60002 83 aaKnown RBP12.19□□□□□ -0.46
RNF139-201ENST00000303545 FAM168BA1KXE4 195 aa12.18□□□□□ -0.46
RNF139-201ENST00000303545 Q6JHZ5 121 aa12.17□□□□□ -0.46
RNF139-201ENST00000303545 UQCRQO14949 82 aa12.16□□□□□ -0.46
RNF139-201ENST00000303545 Q6ZQT0 140 aa12.16□□□□□ -0.46
RNF139-201ENST00000303545 HIST1H4AP62805 103 aaKnown RBP12.16□□□□□ -0.46
RNF139-201ENST00000303545 NKAPP1Q8N9T2 125 aa12.16□□□□□ -0.46
RNF139-201ENST00000303545 TENM2Q9NT68 2774 aa12.16□□□□□ -0.46
RNF139-201ENST00000303545 RPL37AP8A6NKH3 93 aa12.15□□□□□ -0.46
RNF139-201ENST00000303545 C7orf33Q8WU49 177 aa12.13□□□□□ -0.47
RNF139-201ENST00000303545 DSCR8Q96T75 97 aa12.13□□□□□ -0.47
RNF139-201ENST00000303545 LINC00528Q8N1L1 170 aa12.12□□□□□ -0.47
RNF139-201ENST00000303545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.11□□□□□ -0.47
RNF139-201ENST00000303545 DNAH9Q9NYC9 4486 aa12.11□□□□□ -0.47
RNF139-201ENST00000303545 DEFB105AQ8NG35 78 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms