RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 TENM3Q9P273 2699 aa10.2□□□□□ -0.78
CCDC116-201ENST00000292779 OBSCN-AS1Q96MR7 158 aa10.19□□□□□ -0.78
CCDC116-201ENST00000292779 TMEM126AQ9H061 195 aa10.19□□□□□ -0.78
CCDC116-201ENST00000292779 DNHD1Q96M86 4753 aa10.19□□□□□ -0.78
CCDC116-201ENST00000292779 NCR3O14931 201 aa10.19□□□□□ -0.78
CCDC116-201ENST00000292779 LYPD5Q6UWN5 251 aa10.19□□□□□ -0.78
CCDC116-201ENST00000292779 ENHOQ6UWT2 76 aa10.19□□□□□ -0.78
CCDC116-201ENST00000292779 ORMDL1Q9P0S3 153 aa10.19□□□□□ -0.78
CCDC116-201ENST00000292779 RETNQ9HD89 108 aa10.18□□□□□ -0.78
CCDC116-201ENST00000292779 LINC00167Q96N53 147 aa10.17□□□□□ -0.78
CCDC116-201ENST00000292779 IMUPQ9GZP8 106 aa10.17□□□□□ -0.78
CCDC116-201ENST00000292779 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
CCDC116-201ENST00000292779 Q8N814 137 aa10.16□□□□□ -0.78
CCDC116-201ENST00000292779 A0A0J9YWU9 116 aa10.15□□□□□ -0.78
CCDC116-201ENST00000292779 CCDC179H3BU77 68 aa10.15□□□□□ -0.78
CCDC116-201ENST00000292779 A0A1B0GX51 115 aa10.14□□□□□ -0.79
CCDC116-201ENST00000292779 EGFEM1PQ0D2K5 195 aa10.14□□□□□ -0.79
CCDC116-201ENST00000292779 C6orf99Q4VX62 202 aa10.14□□□□□ -0.79
CCDC116-201ENST00000292779 S100A7L2Q5SY68 101 aa10.14□□□□□ -0.79
CCDC116-201ENST00000292779 FAM236AA0A1B0GUQ0 79 aa10.13□□□□□ -0.79
CCDC116-201ENST00000292779 FAM236BA0A1B0GV22 79 aa10.13□□□□□ -0.79
CCDC116-201ENST00000292779 B5MCH6 92 aa10.12□□□□□ -0.79
CCDC116-201ENST00000292779 KPRPQ5T749 579 aaPredicted RBP10.12□□□□□ -0.79
CCDC116-201ENST00000292779 WFDC10BQ8IUB3 73 aa10.12□□□□□ -0.79
CCDC116-201ENST00000292779 MUC7Q8TAX7 377 aa10.12□□□□□ -0.79
CCDC116-201ENST00000292779 Q6ZTC4 211 aa10.11□□□□□ -0.79
CCDC116-201ENST00000292779 LINC00846Q9NV44 126 aa10.1□□□□□ -0.79
CCDC116-201ENST00000292779 C6orf48Q9UBA6 75 aa10.1□□□□□ -0.79
CCDC116-201ENST00000292779 GVQW2A0A096LPI5 108 aaPredicted RBP10.1□□□□□ -0.79
CCDC116-201ENST00000292779 RPL18AQ02543 176 aaKnown RBP10.1□□□□□ -0.79
CCDC116-201ENST00000292779 COL7A1Q02388 2944 aa10.1□□□□□ -0.79
CCDC116-201ENST00000292779 TMEM256-PLSCR3K7ERE1 68 aa10.09□□□□□ -0.79
CCDC116-201ENST00000292779 H3BNG1 76 aa10.09□□□□□ -0.79
CCDC116-201ENST00000292779 LINC00575Q6W349 94 aa10.08□□□□□ -0.8
CCDC116-201ENST00000292779 IGLV6-57P01721 117 aa10.08□□□□□ -0.8
CCDC116-201ENST00000292779 JMJD7-PLA2G4BH0Y9G9 81 aa10.07□□□□□ -0.8
CCDC116-201ENST00000292779 XAGE1AQ9HD64 81 aa10.07□□□□□ -0.8
CCDC116-201ENST00000292779 CCKP06307 115 aa10.07□□□□□ -0.8
CCDC116-201ENST00000292779 HIGD2BQ4VC39 106 aa10.07□□□□□ -0.8
CCDC116-201ENST00000292779 KRTAP26-1Q6PEX3 210 aa10.05□□□□□ -0.8
CCDC116-201ENST00000292779 SS18L2Q9UHA2 77 aa10.05□□□□□ -0.8
CCDC116-201ENST00000292779 hADV29S1A0JD25 119 aa10.04□□□□□ -0.8
CCDC116-201ENST00000292779 ZNF561-AS1K7EIQ3 104 aa10.04□□□□□ -0.8
CCDC116-201ENST00000292779 ESRGQ1W209 222 aa10.04□□□□□ -0.8
CCDC116-201ENST00000292779 IGKV3D-7A0A0C4DH55 119 aa10.04□□□□□ -0.8
CCDC116-201ENST00000292779 TRBV10-3A0A0K0K1G6 114 aa10.04□□□□□ -0.8
CCDC116-201ENST00000292779 Q6JHZ5 121 aa10.04□□□□□ -0.8
CCDC116-201ENST00000292779 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
CCDC116-201ENST00000292779 HUWE1Q7Z6Z7 4374 aaKnown RBP10.03□□□□□ -0.8
CCDC116-201ENST00000292779 K7EIL1 84 aa10.02□□□□□ -0.81
CCDC116-201ENST00000292779 C15orf56Q8N910 161 aa10.02□□□□□ -0.81
CCDC116-201ENST00000292779 MEGF8Q7Z7M0 2845 aa10.01□□□□□ -0.81
CCDC116-201ENST00000292779 TRAV23DV6A0A075B6W5 121 aa10.01□□□□□ -0.81
CCDC116-201ENST00000292779 Q6ZRU5 148 aa10□□□□□ -0.81
CCDC116-201ENST00000292779 DEFB131BA0A096LNP1 70 aa10□□□□□ -0.81
CCDC116-201ENST00000292779 SVIPQ8NHG7 77 aa10□□□□□ -0.81
CCDC116-201ENST00000292779 DNAH9Q9NYC9 4486 aa9.99□□□□□ -0.81
CCDC116-201ENST00000292779 C11orf45Q8TAV5 145 aa9.99□□□□□ -0.81
CCDC116-201ENST00000292779 HIST1H4AP62805 103 aaKnown RBP9.99□□□□□ -0.81
CCDC116-201ENST00000292779 DIRC1Q969H9 104 aa9.99□□□□□ -0.81
CCDC116-201ENST00000292779 PRKDCP78527 4128 aaKnown RBP9.98□□□□□ -0.81
CCDC116-201ENST00000292779 Q6ZQY7 126 aa9.98□□□□□ -0.81
CCDC116-201ENST00000292779 VPREB1P12018 145 aa9.98□□□□□ -0.81
CCDC116-201ENST00000292779 C1orf43Q9BWL3 253 aa9.98□□□□□ -0.81
CCDC116-201ENST00000292779 ZNF73O43830 326 aaPredicted RBP9.97□□□□□ -0.81
CCDC116-201ENST00000292779 LINC01556Q5JQF7 62 aa9.97□□□□□ -0.81
CCDC116-201ENST00000292779 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
CCDC116-201ENST00000292779 RBM3P98179 157 aaKnown RBP9.96□□□□□ -0.81
CCDC116-201ENST00000292779 C2orf48Q96LS8 159 aa9.96□□□□□ -0.81
CCDC116-201ENST00000292779 IGKV2D-24A0A075B6R9 120 aa9.96□□□□□ -0.82
CCDC116-201ENST00000292779 A0A087WVE0 104 aa9.96□□□□□ -0.82
CCDC116-201ENST00000292779 NDUFC2-KCTD14E9PQ53 114 aa9.95□□□□□ -0.82
CCDC116-201ENST00000292779 Q6ZQT0 140 aa9.95□□□□□ -0.82
CCDC116-201ENST00000292779 C3orf22Q8N5N4 141 aa9.95□□□□□ -0.82
CCDC116-201ENST00000292779 MRAPQ8TCY5 172 aa9.95□□□□□ -0.82
CCDC116-201ENST00000292779 STAB2Q8WWQ8 2551 aa9.95□□□□□ -0.82
CCDC116-201ENST00000292779 COX7BP24311 80 aa9.94□□□□□ -0.82
CCDC116-201ENST00000292779 LOC110117498A0A087WWA1 95 aa9.93□□□□□ -0.82
CCDC116-201ENST00000292779 M0R378 163 aa9.93□□□□□ -0.82
CCDC116-201ENST00000292779 ATOX1O00244 68 aa9.93□□□□□ -0.82
CCDC116-201ENST00000292779 UQCRQO14949 82 aa9.93□□□□□ -0.82
CCDC116-201ENST00000292779 ELOF1P60002 83 aaKnown RBP9.93□□□□□ -0.82
CCDC116-201ENST00000292779 Q6ZRP5 223 aa9.93□□□□□ -0.82
CCDC116-201ENST00000292779 C9orf153Q5TBE3 101 aa9.91□□□□□ -0.82
CCDC116-201ENST00000292779 M0R2N4 97 aa9.91□□□□□ -0.82
CCDC116-201ENST00000292779 UBL5Q9BZL1 73 aa9.91□□□□□ -0.82
CCDC116-201ENST00000292779 TRBV7-6A0A0J9YX20 115 aa9.9□□□□□ -0.82
CCDC116-201ENST00000292779 H3BQ85 93 aa9.9□□□□□ -0.82
CCDC116-201ENST00000292779 COX7CP15954 63 aa9.9□□□□□ -0.82
CCDC116-201ENST00000292779 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.9□□□□□ -0.82
CCDC116-201ENST00000292779 SYCNQ0VAF6 134 aa9.9□□□□□ -0.83
CCDC116-201ENST00000292779 ATP5EP2Q5VTU8 51 aa9.9□□□□□ -0.83
CCDC116-201ENST00000292779 DSCR8Q96T75 97 aa9.9□□□□□ -0.83
CCDC116-201ENST00000292779 DNAH10OSP0CZ25 163 aa9.89□□□□□ -0.83
CCDC116-201ENST00000292779 USP17L23D6RBM5 183 aa9.87□□□□□ -0.83
CCDC116-201ENST00000292779 F8WDY8 70 aa9.87□□□□□ -0.83
CCDC116-201ENST00000292779 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
CCDC116-201ENST00000292779 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
CCDC116-201ENST00000292779 TRAV10A0A0B4J240 114 aa9.85□□□□□ -0.83
CCDC116-201ENST00000292779 TM2D3Q9BRN9 247 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms