RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CKS1BP61024 79 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 HIST1H2BCP62807 126 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 HIST2H2BEQ16778 126 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 GAGE2EQ4V326 116 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.61□□□□□ -1.51
HMGN1-201ENST00000288344 SERTAD4-AS1Q5TG53 156 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 C7orf33Q8WU49 177 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 HIST1H2BHQ93079 126 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 PACRGQ96M98 296 aaPredicted RBP5.61□□□□□ -1.51
HMGN1-201ENST00000288344 HIST1H2BNQ99877 126 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 HIST1H2BMQ99879 126 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 GAGE2DQ9UEU5 116 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 PSORS1C2Q9UIG4 136 aa5.61□□□□□ -1.51
HMGN1-201ENST00000288344 HSBP1O75506 76 aa5.6□□□□□ -1.51
HMGN1-201ENST00000288344 PRSS2P07478 247 aa5.6□□□□□ -1.51
HMGN1-201ENST00000288344 COA6Q5JTJ3 125 aaKnown RBP5.6□□□□□ -1.51
HMGN1-201ENST00000288344 CHTOPQ9Y3Y2 248 aaKnown RBP5.6□□□□□ -1.51
HMGN1-201ENST00000288344 H3BRM9 83 aa5.59□□□□□ -1.51
HMGN1-201ENST00000288344 NDUFA6P56556 154 aa5.59□□□□□ -1.51
HMGN1-201ENST00000288344 KRTAP10-8P60410 259 aa5.59□□□□□ -1.51
HMGN1-201ENST00000288344 XAGE1AQ9HD64 81 aa5.59□□□□□ -1.51
HMGN1-201ENST00000288344 IGLV5-37A0A075B6J1 123 aa5.58□□□□□ -1.52
HMGN1-201ENST00000288344 LEPROTL1O95214 131 aa5.58□□□□□ -1.52
HMGN1-201ENST00000288344 SPINK6Q6UWN8 80 aa5.58□□□□□ -1.52
HMGN1-201ENST00000288344 Q8NDZ9 215 aa5.58□□□□□ -1.52
HMGN1-201ENST00000288344 LINC01600Q96MT4 127 aa5.58□□□□□ -1.52
HMGN1-201ENST00000288344 C22orf24Q9Y442 160 aa5.58□□□□□ -1.52
HMGN1-201ENST00000288344 TP73-AS1Q9UF72 201 aa5.57□□□□□ -1.52
HMGN1-201ENST00000288344 COX17Q14061 63 aa5.56□□□□□ -1.52
HMGN1-201ENST00000288344 TMEM170BQ5T4T1 132 aa5.56□□□□□ -1.52
HMGN1-201ENST00000288344 FAM19A5Q7Z5A7 132 aaPredicted RBP5.56□□□□□ -1.52
HMGN1-201ENST00000288344 GAGE10A6NGK3 116 aa5.55□□□□□ -1.52
HMGN1-201ENST00000288344 M0QXV9 152 aa5.55□□□□□ -1.52
HMGN1-201ENST00000288344 IGLV7-43P04211 117 aa5.55□□□□□ -1.52
HMGN1-201ENST00000288344 ERG28Q9UKR5 140 aa5.55□□□□□ -1.52
HMGN1-201ENST00000288344 KRTAP1-4P0C5Y4 121 aa5.54□□□□□ -1.52
HMGN1-201ENST00000288344 VPREB1P12018 145 aa5.54□□□□□ -1.52
HMGN1-201ENST00000288344 FABP4P15090 132 aa5.54□□□□□ -1.52
HMGN1-201ENST00000288344 TSPEAR-AS2P59090 65 aa5.54□□□□□ -1.52
HMGN1-201ENST00000288344 SND1-IT1Q9HBX3 110 aa5.54□□□□□ -1.52
HMGN1-201ENST00000288344 LOC107984156A0A0G2JMH3 177 aa5.53□□□□□ -1.52
HMGN1-201ENST00000288344 C1orf137Q5JT78 98 aa5.53□□□□□ -1.52
HMGN1-201ENST00000288344 SFTA2Q6UW10 78 aa5.53□□□□□ -1.52
HMGN1-201ENST00000288344 KRTAP13-1Q8IUC0 172 aa5.53□□□□□ -1.52
HMGN1-201ENST00000288344 ARL17AQ8IVW1 177 aa5.53□□□□□ -1.52
HMGN1-201ENST00000288344 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
HMGN1-201ENST00000288344 HSPB8Q9UJY1 196 aa5.53□□□□□ -1.52
HMGN1-201ENST00000288344 UBR4Q5T4S7 5183 aa5.53□□□□□ -1.52
HMGN1-201ENST00000288344 SYS1-DBNDD2H3BUS1 97 aa5.52□□□□□ -1.53
HMGN1-201ENST00000288344 MRPL55Q7Z7F7 128 aaKnown RBP5.52□□□□□ -1.53
HMGN1-201ENST00000288344 LRP2P98164 4655 aa5.52□□□□□ -1.53
HMGN1-201ENST00000288344 LEPROTO15243 131 aa5.51□□□□□ -1.53
HMGN1-201ENST00000288344 PFN2P35080 140 aa5.51□□□□□ -1.53
HMGN1-201ENST00000288344 LINC01545Q5VT33 79 aa5.51□□□□□ -1.53
HMGN1-201ENST00000288344 PMCHL2Q9BQD1 86 aa5.51□□□□□ -1.53
HMGN1-201ENST00000288344 IGLV1-50A0A075B6I6 118 aa5.5□□□□□ -1.53
HMGN1-201ENST00000288344 A0A0A0MQY5 61 aa5.5□□□□□ -1.53
HMGN1-201ENST00000288344 DPM2O94777 84 aa5.5□□□□□ -1.53
HMGN1-201ENST00000288344 IGKCP01834 107 aa5.5□□□□□ -1.53
HMGN1-201ENST00000288344 S100A1P23297 94 aa5.5□□□□□ -1.53
HMGN1-201ENST00000288344 PLNP26678 52 aa5.5□□□□□ -1.53
HMGN1-201ENST00000288344 LBHQ53QV2 105 aaPredicted RBP5.5□□□□□ -1.53
HMGN1-201ENST00000288344 H0Y9J4 135 aa5.49□□□□□ -1.53
HMGN1-201ENST00000288344 ZNF861PO60384 105 aa5.49□□□□□ -1.53
HMGN1-201ENST00000288344 ATP6V1G1O75348 118 aa5.49□□□□□ -1.53
HMGN1-201ENST00000288344 C3orf79P0CE67 100 aa5.49□□□□□ -1.53
HMGN1-201ENST00000288344 HERV-K104P63124 156 aa5.49□□□□□ -1.53
HMGN1-201ENST00000288344 MAP1LC3CQ9BXW4 147 aa5.49□□□□□ -1.53
HMGN1-201ENST00000288344 NDUFA12Q9UI09 145 aa5.49□□□□□ -1.53
HMGN1-201ENST00000288344 E9PLD3 99 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 J3QQQ9 107 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 SMIM13P0DJ93 91 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 PET117Q6UWS5 81 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 LPAP08519 4548 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 RPL37AP8A6NKH3 93 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 H0Y8G0 127 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 BCE1O60756 84 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 REG3GQ6UW15 175 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 DIRC1Q969H9 104 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 PLEKHB2Q96CS7 222 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 LITAFQ99732 161 aa5.48□□□□□ -1.53
HMGN1-201ENST00000288344 MYMXA0A1B0GTQ4 84 aa5.47□□□□□ -1.53
HMGN1-201ENST00000288344 KRTAP4-16G5E9R7 235 aaPredicted RBP5.47□□□□□ -1.53
HMGN1-201ENST00000288344 M0R378 163 aa5.47□□□□□ -1.53
HMGN1-201ENST00000288344 SCGB1D1O95968 90 aa5.47□□□□□ -1.53
HMGN1-201ENST00000288344 UBE2BP63146 152 aa5.47□□□□□ -1.53
HMGN1-201ENST00000288344 ADAMTSL4-AS1Q5T5F5 129 aa5.47□□□□□ -1.53
HMGN1-201ENST00000288344 MIR7-3HGQ8N6C7 128 aa5.47□□□□□ -1.53
HMGN1-201ENST00000288344 IGKV2D-26A0A0A0MRZ7 120 aa5.46□□□□□ -1.54
HMGN1-201ENST00000288344 A0A0U1RRA0 63 aa5.46□□□□□ -1.54
HMGN1-201ENST00000288344 SPRR1AP35321 89 aa5.46□□□□□ -1.54
HMGN1-201ENST00000288344 NMUP48645 174 aa5.46□□□□□ -1.54
HMGN1-201ENST00000288344 LINC00158P58513 81 aa5.46□□□□□ -1.54
HMGN1-201ENST00000288344 RPL24P83731 157 aaKnown RBP5.46□□□□□ -1.54
HMGN1-201ENST00000288344 SOSTDC1Q6X4U4 206 aa5.46□□□□□ -1.54
HMGN1-201ENST00000288344 LINC00587B1AMM8 73 aa5.45□□□□□ -1.54
HMGN1-201ENST00000288344 HIST3H2BBQ8N257 126 aa5.45□□□□□ -1.54
HMGN1-201ENST00000288344 A0A0J9YXY3 114 aa5.44□□□□□ -1.54
HMGN1-201ENST00000288344 TMEM238C9JI98 176 aa5.44□□□□□ -1.54
HMGN1-201ENST00000288344 PRR26Q8N8Z3 221 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms