RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ENHOQ6UWT2 76 aa16.92■□□□□ 0.3
ROM1-201ENST00000278833 LYPD5Q6UWN5 251 aa16.91■□□□□ 0.3
ROM1-201ENST00000278833 HTN3P15516 51 aa16.9■□□□□ 0.3
ROM1-201ENST00000278833 C9orf116Q5BN46 136 aaPredicted RBP16.9■□□□□ 0.3
ROM1-201ENST00000278833 C14orf132Q9NPU4 83 aa16.9■□□□□ 0.3
ROM1-201ENST00000278833 JMJD7-PLA2G4BH0Y9G9 81 aa16.89■□□□□ 0.29
ROM1-201ENST00000278833 PRR3P79522 188 aaKnown RBP16.89■□□□□ 0.29
ROM1-201ENST00000278833 Q8NDZ9 215 aa16.89■□□□□ 0.29
ROM1-201ENST00000278833 KLK12Q9UKR0 248 aa16.89■□□□□ 0.29
ROM1-201ENST00000278833 C10orf25Q5T742 122 aa16.88■□□□□ 0.29
ROM1-201ENST00000278833 UNQ6190/PRO20217Q6UXQ8 127 aa16.88■□□□□ 0.29
ROM1-201ENST00000278833 TMEM256-PLSCR3K7ERE1 68 aa16.88■□□□□ 0.29
ROM1-201ENST00000278833 SLPIP03973 132 aa16.86■□□□□ 0.29
ROM1-201ENST00000278833 Q6JHZ5 121 aa16.86■□□□□ 0.29
ROM1-201ENST00000278833 IGLV6-57P01721 117 aa16.85■□□□□ 0.29
ROM1-201ENST00000278833 C6orf223Q8N319 242 aa16.85■□□□□ 0.29
ROM1-201ENST00000278833 FAM236AA0A1B0GUQ0 79 aa16.84■□□□□ 0.29
ROM1-201ENST00000278833 FAM236BA0A1B0GV22 79 aa16.84■□□□□ 0.29
ROM1-201ENST00000278833 CCDC179H3BU77 68 aa16.84■□□□□ 0.29
ROM1-201ENST00000278833 NCR3O14931 201 aa16.84■□□□□ 0.29
ROM1-201ENST00000278833 CCKP06307 115 aa16.83■□□□□ 0.28
ROM1-201ENST00000278833 C6orf99Q4VX62 202 aa16.83■□□□□ 0.28
ROM1-201ENST00000278833 S100A7L2Q5SY68 101 aa16.83■□□□□ 0.28
ROM1-201ENST00000278833 LINC00575Q6W349 94 aa16.83■□□□□ 0.28
ROM1-201ENST00000278833 DNAH3Q8TD57 4116 aa16.81■□□□□ 0.28
ROM1-201ENST00000278833 HIST1H4AP62805 103 aaKnown RBP16.8■□□□□ 0.28
ROM1-201ENST00000278833 EGFEM1PQ0D2K5 195 aa16.8■□□□□ 0.28
ROM1-201ENST00000278833 LINC00846Q9NV44 126 aa16.8■□□□□ 0.28
ROM1-201ENST00000278833 C6orf48Q9UBA6 75 aa16.8■□□□□ 0.28
ROM1-201ENST00000278833 H3BQ85 93 aa16.79■□□□□ 0.28
ROM1-201ENST00000278833 KRTAP26-1Q6PEX3 210 aa16.79■□□□□ 0.28
ROM1-201ENST00000278833 FBN3Q75N90 2809 aa16.78■□□□□ 0.28
ROM1-201ENST00000278833 B5MCH6 92 aa16.78■□□□□ 0.28
ROM1-201ENST00000278833 KRTAP10-11P60412 298 aa16.78■□□□□ 0.28
ROM1-201ENST00000278833 KPRPQ5T749 579 aaPredicted RBP16.78■□□□□ 0.28
ROM1-201ENST00000278833 MEGF8Q7Z7M0 2845 aa16.75■□□□□ 0.27
ROM1-201ENST00000278833 NBEAL2Q6ZNJ1 2754 aa16.74■□□□□ 0.27
ROM1-201ENST00000278833 hADV29S1A0JD25 119 aa16.73■□□□□ 0.27
ROM1-201ENST00000278833 F8WDY8 70 aa16.73■□□□□ 0.27
ROM1-201ENST00000278833 PRB2P02812 416 aaPredicted RBP16.73■□□□□ 0.27
ROM1-201ENST00000278833 WFDC10BQ8IUB3 73 aa16.73■□□□□ 0.27
ROM1-201ENST00000278833 LINC00526Q96FQ7 95 aa16.73■□□□□ 0.27
ROM1-201ENST00000278833 C2orf48Q96LS8 159 aa16.72■□□□□ 0.27
ROM1-201ENST00000278833 RPL18AQ02543 176 aaKnown RBP16.71■□□□□ 0.27
ROM1-201ENST00000278833 ATP5EP2Q5VTU8 51 aa16.71■□□□□ 0.27
ROM1-201ENST00000278833 TRBV7-6A0A0J9YX20 115 aa16.71■□□□□ 0.27
ROM1-201ENST00000278833 ZNF561-AS1K7EIQ3 104 aa16.71■□□□□ 0.27
ROM1-201ENST00000278833 Q6ZTC4 211 aa16.69■□□□□ 0.26
ROM1-201ENST00000278833 RETNQ9HD89 108 aa16.69■□□□□ 0.26
ROM1-201ENST00000278833 LOC110117498A0A087WWA1 95 aa16.68■□□□□ 0.26
ROM1-201ENST00000278833 TRAV23DV6A0A075B6W5 121 aa16.67■□□□□ 0.26
ROM1-201ENST00000278833 ATOX1O00244 68 aa16.67■□□□□ 0.26
ROM1-201ENST00000278833 LINC01556Q5JQF7 62 aa16.67■□□□□ 0.26
ROM1-201ENST00000278833 DIRC1Q969H9 104 aa16.67■□□□□ 0.26
ROM1-201ENST00000278833 TRBV10-3A0A0K0K1G6 114 aa16.65■□□□□ 0.26
ROM1-201ENST00000278833 UQCRQO14949 82 aa16.65■□□□□ 0.26
ROM1-201ENST00000278833 C15orf56Q8N910 161 aa16.65■□□□□ 0.26
ROM1-201ENST00000278833 CAMK2N2Q96S95 79 aa16.65■□□□□ 0.26
ROM1-201ENST00000278833 SS18L2Q9UHA2 77 aa16.65■□□□□ 0.26
ROM1-201ENST00000278833 VPREB1P12018 145 aa16.65■□□□□ 0.26
ROM1-201ENST00000278833 C3orf22Q8N5N4 141 aa16.64■□□□□ 0.25
ROM1-201ENST00000278833 ESRGQ1W209 222 aa16.63■□□□□ 0.25
ROM1-201ENST00000278833 Q6ZQT0 140 aa16.62■□□□□ 0.25
ROM1-201ENST00000278833 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.61■□□□□ 0.25
ROM1-201ENST00000278833 PRKDCP78527 4128 aaKnown RBP16.61■□□□□ 0.25
ROM1-201ENST00000278833 K7EIL1 84 aa16.61■□□□□ 0.25
ROM1-201ENST00000278833 GHRHP01286 108 aa16.61■□□□□ 0.25
ROM1-201ENST00000278833 RBM3P98179 157 aaKnown RBP16.61■□□□□ 0.25
ROM1-201ENST00000278833 IGKV3D-7A0A0C4DH55 119 aa16.6■□□□□ 0.25
ROM1-201ENST00000278833 NDUFC2-KCTD14E9PQ53 114 aa16.6■□□□□ 0.25
ROM1-201ENST00000278833 PDE6GP18545 87 aa16.6■□□□□ 0.25
ROM1-201ENST00000278833 ELOF1P60002 83 aaKnown RBP16.6■□□□□ 0.25
ROM1-201ENST00000278833 XAGE1AQ9HD64 81 aa16.6■□□□□ 0.25
ROM1-201ENST00000278833 M0R378 163 aa16.59■□□□□ 0.25
ROM1-201ENST00000278833 ZNF73O43830 326 aaPredicted RBP16.59■□□□□ 0.25
ROM1-201ENST00000278833 COX7CP15954 63 aa16.59■□□□□ 0.25
ROM1-201ENST00000278833 Q6ZRU5 148 aa16.59■□□□□ 0.25
ROM1-201ENST00000278833 HIGD2BQ4VC39 106 aa16.59■□□□□ 0.25
ROM1-201ENST00000278833 C1orf43Q9BWL3 253 aa16.58■□□□□ 0.24
ROM1-201ENST00000278833 COX7BP24311 80 aa16.57■□□□□ 0.24
ROM1-201ENST00000278833 Q6ZQY7 126 aa16.56■□□□□ 0.24
ROM1-201ENST00000278833 DEFB131BA0A096LNP1 70 aa16.55■□□□□ 0.24
ROM1-201ENST00000278833 MRAPQ8TCY5 172 aa16.54■□□□□ 0.24
ROM1-201ENST00000278833 UBL5Q9BZL1 73 aa16.54■□□□□ 0.24
ROM1-201ENST00000278833 DNAH10OSP0CZ25 163 aa16.54■□□□□ 0.24
ROM1-201ENST00000278833 C11orf45Q8TAV5 145 aa16.53■□□□□ 0.24
ROM1-201ENST00000278833 C9orf153Q5TBE3 101 aa16.52■□□□□ 0.23
ROM1-201ENST00000278833 LAMTOR3Q9UHA4 124 aa16.52■□□□□ 0.23
ROM1-201ENST00000278833 CRYGAP11844 174 aa16.5■□□□□ 0.23
ROM1-201ENST00000278833 DSCR8Q96T75 97 aa16.48■□□□□ 0.23
ROM1-201ENST00000278833 LINC00528Q8N1L1 170 aa16.48■□□□□ 0.23
ROM1-201ENST00000278833 USP17L23D6RBM5 183 aa16.47■□□□□ 0.23
ROM1-201ENST00000278833 SYCNQ0VAF6 134 aa16.47■□□□□ 0.23
ROM1-201ENST00000278833 TRBV7-4A0A0J9YYF1 115 aa16.46■□□□□ 0.23
ROM1-201ENST00000278833 TLX1NBP0CAT3 122 aa16.46■□□□□ 0.23
ROM1-201ENST00000278833 IGKV2D-24A0A075B6R9 120 aa16.46■□□□□ 0.22
ROM1-201ENST00000278833 SERP2Q8N6R1 65 aa16.46■□□□□ 0.22
ROM1-201ENST00000278833 A0A087WVE0 104 aa16.45■□□□□ 0.22
ROM1-201ENST00000278833 Q6ZRP5 223 aa16.45■□□□□ 0.22
ROM1-201ENST00000278833 PLA2G2DQ9UNK4 145 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms