RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 Q9HAA7 133 aa6.36□□□□□ -1.39
TRIM55-201ENST00000276573 F8WDY8 70 aa6.35□□□□□ -1.39
TRIM55-201ENST00000276573 Q6ZRU5 148 aa6.35□□□□□ -1.39
TRIM55-201ENST00000276573 TMEM126AQ9H061 195 aa6.35□□□□□ -1.39
TRIM55-201ENST00000276573 HUWE1Q7Z6Z7 4374 aaKnown RBP6.33□□□□□ -1.4
TRIM55-201ENST00000276573 NCR3O14931 201 aa6.33□□□□□ -1.4
TRIM55-201ENST00000276573 APLNQ9ULZ1 77 aa6.33□□□□□ -1.4
TRIM55-201ENST00000276573 BAALC-AS2P0C853 105 aa6.32□□□□□ -1.4
TRIM55-201ENST00000276573 NHLRC4P0CG21 123 aaPredicted RBP6.32□□□□□ -1.4
TRIM55-201ENST00000276573 RMI2Q96E14 147 aa6.32□□□□□ -1.4
TRIM55-201ENST00000276573 A0A087WYN8 130 aa6.31□□□□□ -1.4
TRIM55-201ENST00000276573 TEX49A0A1B0GTD5 131 aa6.31□□□□□ -1.4
TRIM55-201ENST00000276573 SYCNQ0VAF6 134 aa6.31□□□□□ -1.4
TRIM55-201ENST00000276573 S100A7L2Q5SY68 101 aa6.31□□□□□ -1.4
TRIM55-201ENST00000276573 XAGE1AQ9HD64 81 aa6.31□□□□□ -1.4
TRIM55-201ENST00000276573 DNHD1Q96M86 4753 aa6.31□□□□□ -1.4
TRIM55-201ENST00000276573 NDUFC2-KCTD14E9PQ53 114 aa6.31□□□□□ -1.4
TRIM55-201ENST00000276573 CASC10Q5T4H9 136 aa6.31□□□□□ -1.4
TRIM55-201ENST00000276573 USP17L23D6RBM5 183 aa6.29□□□□□ -1.4
TRIM55-201ENST00000276573 IGLV6-57P01721 117 aa6.29□□□□□ -1.4
TRIM55-201ENST00000276573 RPL18AQ02543 176 aaKnown RBP6.29□□□□□ -1.4
TRIM55-201ENST00000276573 C22orf24Q9Y442 160 aa6.29□□□□□ -1.4
TRIM55-201ENST00000276573 LECT2O14960 151 aa6.29□□□□□ -1.4
TRIM55-201ENST00000276573 DNAL4O96015 105 aa6.28□□□□□ -1.4
TRIM55-201ENST00000276573 SLPIP03973 132 aa6.28□□□□□ -1.4
TRIM55-201ENST00000276573 VPREB1P12018 145 aa6.28□□□□□ -1.4
TRIM55-201ENST00000276573 Q6ZRP5 223 aa6.28□□□□□ -1.4
TRIM55-201ENST00000276573 COL7A1Q02388 2944 aa6.28□□□□□ -1.4
TRIM55-201ENST00000276573 A0A1B0GX51 115 aa6.27□□□□□ -1.4
TRIM55-201ENST00000276573 GAGE2EQ4V326 116 aa6.27□□□□□ -1.4
TRIM55-201ENST00000276573 C6orf99Q4VX62 202 aa6.27□□□□□ -1.4
TRIM55-201ENST00000276573 CDIP1Q9H305 208 aa6.27□□□□□ -1.4
TRIM55-201ENST00000276573 GAGE2DQ9UEU5 116 aa6.27□□□□□ -1.4
TRIM55-201ENST00000276573 TLX1NBP0CAT3 122 aa6.27□□□□□ -1.41
TRIM55-201ENST00000276573 UBE2DNLQ8IWF7 75 aa6.27□□□□□ -1.41
TRIM55-201ENST00000276573 TRBV10-3A0A0K0K1G6 114 aa6.26□□□□□ -1.41
TRIM55-201ENST00000276573 M0R378 163 aa6.26□□□□□ -1.41
TRIM55-201ENST00000276573 Q8N814 137 aa6.26□□□□□ -1.41
TRIM55-201ENST00000276573 LINC00167Q96N53 147 aa6.26□□□□□ -1.41
TRIM55-201ENST00000276573 SIGMAR1Q99720 223 aa6.26□□□□□ -1.41
TRIM55-201ENST00000276573 KRTAP1-5Q9BYS1 174 aa6.26□□□□□ -1.41
TRIM55-201ENST00000276573 NUPR2A6NF83 97 aa6.25□□□□□ -1.41
TRIM55-201ENST00000276573 C9orf129Q5T035 196 aaKnown RBP6.25□□□□□ -1.41
TRIM55-201ENST00000276573 LINC00575Q6W349 94 aa6.25□□□□□ -1.41
TRIM55-201ENST00000276573 DNAH9Q9NYC9 4486 aa6.24□□□□□ -1.41
TRIM55-201ENST00000276573 TRAV23DV6A0A075B6W5 121 aa6.24□□□□□ -1.41
TRIM55-201ENST00000276573 SNCGO76070 127 aa6.24□□□□□ -1.41
TRIM55-201ENST00000276573 ORMDL1Q9P0S3 153 aa6.24□□□□□ -1.41
TRIM55-201ENST00000276573 STAB2Q8WWQ8 2551 aa6.23□□□□□ -1.41
TRIM55-201ENST00000276573 DIRC1Q969H9 104 aa6.22□□□□□ -1.41
TRIM55-201ENST00000276573 PLA2G2DQ9UNK4 145 aa6.22□□□□□ -1.41
TRIM55-201ENST00000276573 TRBV7-6A0A0J9YX20 115 aa6.22□□□□□ -1.41
TRIM55-201ENST00000276573 ZNF73O43830 326 aaPredicted RBP6.22□□□□□ -1.41
TRIM55-201ENST00000276573 OBSCN-AS1Q96MR7 158 aa6.22□□□□□ -1.41
TRIM55-201ENST00000276573 hADV29S1A0JD25 119 aa6.21□□□□□ -1.42
TRIM55-201ENST00000276573 INAFM2P0DMQ5 153 aa6.21□□□□□ -1.42
TRIM55-201ENST00000276573 SERTAD4-AS1Q5TG53 156 aa6.21□□□□□ -1.42
TRIM55-201ENST00000276573 FAM240AA0A1B0GVK7 77 aa6.2□□□□□ -1.42
TRIM55-201ENST00000276573 PSCAO43653 123 aa6.2□□□□□ -1.42
TRIM55-201ENST00000276573 LOC107984640A0A0U1RRK4 108 aa6.2□□□□□ -1.42
TRIM55-201ENST00000276573 TMEM256-PLSCR3K7ERE1 68 aa6.2□□□□□ -1.42
TRIM55-201ENST00000276573 COX7BP24311 80 aa6.2□□□□□ -1.42
TRIM55-201ENST00000276573 PCP4P48539 62 aa6.2□□□□□ -1.42
TRIM55-201ENST00000276573 XGP55808 180 aa6.2□□□□□ -1.42
TRIM55-201ENST00000276573 GAGE2BQ13066 116 aa6.2□□□□□ -1.42
TRIM55-201ENST00000276573 NKAPP1Q8N9T2 125 aa6.2□□□□□ -1.42
TRIM55-201ENST00000276573 IGLV5-37A0A075B6J1 123 aa6.19□□□□□ -1.42
TRIM55-201ENST00000276573 NBDYA0A0U1RRE5 68 aa6.19□□□□□ -1.42
TRIM55-201ENST00000276573 C21orf62-AS1Q17RA5 79 aa6.19□□□□□ -1.42
TRIM55-201ENST00000276573 C7orf33Q8WU49 177 aa6.19□□□□□ -1.42
TRIM55-201ENST00000276573 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
TRIM55-201ENST00000276573 ACYP1P07311 99 aa6.18□□□□□ -1.42
TRIM55-201ENST00000276573 ELOF1P60002 83 aaKnown RBP6.18□□□□□ -1.42
TRIM55-201ENST00000276573 TTC32Q5I0X7 151 aa6.18□□□□□ -1.42
TRIM55-201ENST00000276573 KCNQ1DNQ9H478 68 aa6.18□□□□□ -1.42
TRIM55-201ENST00000276573 DYNC2H1Q8NCM8 4307 aaKnown RBP6.17□□□□□ -1.42
TRIM55-201ENST00000276573 FAM168BA1KXE4 195 aa6.17□□□□□ -1.42
TRIM55-201ENST00000276573 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
TRIM55-201ENST00000276573 C14orf177Q52M58 125 aa6.17□□□□□ -1.42
TRIM55-201ENST00000276573 KRTAP21-3Q3LHN1 58 aa6.17□□□□□ -1.42
TRIM55-201ENST00000276573 KRTAP7-1Q8IUC3 87 aa6.17□□□□□ -1.42
TRIM55-201ENST00000276573 C14orf132Q9NPU4 83 aa6.17□□□□□ -1.42
TRIM55-201ENST00000276573 DNAH1Q9P2D7 4330 aa6.16□□□□□ -1.42
TRIM55-201ENST00000276573 JMJD7-PLA2G4BH0Y9G9 81 aa6.16□□□□□ -1.42
TRIM55-201ENST00000276573 Q6ZQY7 126 aa6.16□□□□□ -1.42
TRIM55-201ENST00000276573 LINC00528Q8N1L1 170 aa6.16□□□□□ -1.42
TRIM55-201ENST00000276573 H3BQ85 93 aa6.15□□□□□ -1.42
TRIM55-201ENST00000276573 SCGB1A1P11684 91 aa6.15□□□□□ -1.42
TRIM55-201ENST00000276573 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.15□□□□□ -1.42
TRIM55-201ENST00000276573 IGLV1-50A0A075B6I6 118 aa6.15□□□□□ -1.43
TRIM55-201ENST00000276573 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.43
TRIM55-201ENST00000276573 GAGE2AQ6NT46 116 aa6.15□□□□□ -1.43
TRIM55-201ENST00000276573 Q6ZRN7 208 aaPredicted RBP6.15□□□□□ -1.43
TRIM55-201ENST00000276573 RPL37AP8A6NKH3 93 aa6.14□□□□□ -1.43
TRIM55-201ENST00000276573 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.13□□□□□ -1.43
TRIM55-201ENST00000276573 C16orf90A8MZG2 172 aa6.13□□□□□ -1.43
TRIM55-201ENST00000276573 PRYO14603 147 aa6.13□□□□□ -1.43
TRIM55-201ENST00000276573 FAM19A5Q7Z5A7 132 aaPredicted RBP6.13□□□□□ -1.43
TRIM55-201ENST00000276573 MRPL55Q7Z7F7 128 aaKnown RBP6.13□□□□□ -1.43
TRIM55-201ENST00000276573 MEGF8Q7Z7M0 2845 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms