RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 ESRGQ1W209 222 aa11.33□□□□□ -0.6
GAPDH-201ENST00000229239 TENM3Q9P273 2699 aa11.32□□□□□ -0.6
GAPDH-201ENST00000229239 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
GAPDH-201ENST00000229239 C15orf53Q8NAA6 179 aa11.32□□□□□ -0.6
GAPDH-201ENST00000229239 STAB2Q8WWQ8 2551 aa11.31□□□□□ -0.6
GAPDH-201ENST00000229239 C9orf116Q5BN46 136 aaPredicted RBP11.3□□□□□ -0.6
GAPDH-201ENST00000229239 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
GAPDH-201ENST00000229239 C6orf223Q8N319 242 aa11.3□□□□□ -0.6
GAPDH-201ENST00000229239 HUWE1Q7Z6Z7 4374 aaKnown RBP11.3□□□□□ -0.6
GAPDH-201ENST00000229239 TRAV10A0A0B4J240 114 aa11.29□□□□□ -0.6
GAPDH-201ENST00000229239 ZNF561-AS1K7EIQ3 104 aa11.29□□□□□ -0.6
GAPDH-201ENST00000229239 MT-ATP8P03928 68 aa11.29□□□□□ -0.6
GAPDH-201ENST00000229239 KRTAP26-1Q6PEX3 210 aa11.29□□□□□ -0.6
GAPDH-201ENST00000229239 C2orf48Q96LS8 159 aa11.29□□□□□ -0.6
GAPDH-201ENST00000229239 WWC2-AS2Q96NR7 200 aa11.29□□□□□ -0.6
GAPDH-201ENST00000229239 TM2D3Q9BRN9 247 aa11.29□□□□□ -0.6
GAPDH-201ENST00000229239 A0A087WYN8 130 aa11.29□□□□□ -0.6
GAPDH-201ENST00000229239 S100A7L2Q5SY68 101 aa11.27□□□□□ -0.6
GAPDH-201ENST00000229239 C1orf43Q9BWL3 253 aa11.27□□□□□ -0.6
GAPDH-201ENST00000229239 LECT2O14960 151 aa11.27□□□□□ -0.61
GAPDH-201ENST00000229239 LINC00167Q96N53 147 aa11.27□□□□□ -0.61
GAPDH-201ENST00000229239 Q9HAA7 133 aa11.27□□□□□ -0.61
GAPDH-201ENST00000229239 DNAH10OSP0CZ25 163 aa11.26□□□□□ -0.61
GAPDH-201ENST00000229239 ORMDL1Q9P0S3 153 aa11.26□□□□□ -0.61
GAPDH-201ENST00000229239 C6orf48Q9UBA6 75 aa11.26□□□□□ -0.61
GAPDH-201ENST00000229239 DNAH7Q8WXX0 4024 aa11.26□□□□□ -0.61
GAPDH-201ENST00000229239 KMT2CQ8NEZ4 4911 aaKnown RBP11.26□□□□□ -0.61
GAPDH-201ENST00000229239 Q6Q795 121 aa11.25□□□□□ -0.61
GAPDH-201ENST00000229239 C22orf24Q9Y442 160 aa11.25□□□□□ -0.61
GAPDH-201ENST00000229239 PRR3P79522 188 aaKnown RBP11.25□□□□□ -0.61
GAPDH-201ENST00000229239 CAMK2N2Q96S95 79 aa11.25□□□□□ -0.61
GAPDH-201ENST00000229239 LINC00526Q96FQ7 95 aa11.24□□□□□ -0.61
GAPDH-201ENST00000229239 OBSCN-AS1Q96MR7 158 aa11.23□□□□□ -0.61
GAPDH-201ENST00000229239 H3BQ85 93 aa11.23□□□□□ -0.61
GAPDH-201ENST00000229239 IGLV6-57P01721 117 aa11.23□□□□□ -0.61
GAPDH-201ENST00000229239 Q8N814 137 aa11.23□□□□□ -0.61
GAPDH-201ENST00000229239 NCR3O14931 201 aa11.22□□□□□ -0.61
GAPDH-201ENST00000229239 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
GAPDH-201ENST00000229239 GAGE2EQ4V326 116 aa11.22□□□□□ -0.61
GAPDH-201ENST00000229239 GAGE2DQ9UEU5 116 aa11.22□□□□□ -0.61
GAPDH-201ENST00000229239 TMEM256-PLSCR3K7ERE1 68 aa11.21□□□□□ -0.61
GAPDH-201ENST00000229239 C15orf56Q8N910 161 aa11.21□□□□□ -0.61
GAPDH-201ENST00000229239 Q8NDZ9 215 aa11.21□□□□□ -0.61
GAPDH-201ENST00000229239 A0A1B0GV72 72 aa11.21□□□□□ -0.62
GAPDH-201ENST00000229239 C6orf99Q4VX62 202 aa11.2□□□□□ -0.62
GAPDH-201ENST00000229239 JMJD7-PLA2G4BH0Y9G9 81 aa11.19□□□□□ -0.62
GAPDH-201ENST00000229239 HIGD2BQ4VC39 106 aa11.19□□□□□ -0.62
GAPDH-201ENST00000229239 NDUFC2-KCTD14E9PQ53 114 aa11.19□□□□□ -0.62
GAPDH-201ENST00000229239 IGKV2D-24A0A075B6R9 120 aa11.18□□□□□ -0.62
GAPDH-201ENST00000229239 RMI2Q96E14 147 aa11.18□□□□□ -0.62
GAPDH-201ENST00000229239 GHRHP01286 108 aa11.17□□□□□ -0.62
GAPDH-201ENST00000229239 LINC00575Q6W349 94 aa11.17□□□□□ -0.62
GAPDH-201ENST00000229239 SDIM1Q6ZPB5 146 aa11.17□□□□□ -0.62
GAPDH-201ENST00000229239 LINC00643Q86TS7 51 aa11.17□□□□□ -0.62
GAPDH-201ENST00000229239 IMUPQ9GZP8 106 aa11.17□□□□□ -0.62
GAPDH-201ENST00000229239 TRBV7-6A0A0J9YX20 115 aa11.17□□□□□ -0.62
GAPDH-201ENST00000229239 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
GAPDH-201ENST00000229239 Q6ZRU5 148 aa11.16□□□□□ -0.62
GAPDH-201ENST00000229239 LINC00588Q9Y4M8 146 aa11.15□□□□□ -0.62
GAPDH-201ENST00000229239 TRBV7-7A0A0K0K1E9 115 aa11.15□□□□□ -0.63
GAPDH-201ENST00000229239 C3orf84H3BNL1 204 aa11.15□□□□□ -0.63
GAPDH-201ENST00000229239 UPK3BQ9BT76 320 aa11.15□□□□□ -0.63
GAPDH-201ENST00000229239 TRAV23DV6A0A075B6W5 121 aa11.14□□□□□ -0.63
GAPDH-201ENST00000229239 hADV29S1A0JD25 119 aa11.14□□□□□ -0.63
GAPDH-201ENST00000229239 M0R378 163 aa11.14□□□□□ -0.63
GAPDH-201ENST00000229239 SYCNQ0VAF6 134 aa11.14□□□□□ -0.63
GAPDH-201ENST00000229239 GAGE2AQ6NT46 116 aa11.13□□□□□ -0.63
GAPDH-201ENST00000229239 DIRC1Q969H9 104 aa11.13□□□□□ -0.63
GAPDH-201ENST00000229239 XAGE1AQ9HD64 81 aa11.13□□□□□ -0.63
GAPDH-201ENST00000229239 RYR3Q15413 4870 aa11.13□□□□□ -0.63
GAPDH-201ENST00000229239 SLPIP03973 132 aa11.12□□□□□ -0.63
GAPDH-201ENST00000229239 VPREB1P12018 145 aa11.12□□□□□ -0.63
GAPDH-201ENST00000229239 TRBV10-3A0A0K0K1G6 114 aa11.11□□□□□ -0.63
GAPDH-201ENST00000229239 TTC32Q5I0X7 151 aa11.11□□□□□ -0.63
GAPDH-201ENST00000229239 TLX1NBP0CAT3 122 aa11.1□□□□□ -0.63
GAPDH-201ENST00000229239 CASC10Q5T4H9 136 aa11.1□□□□□ -0.63
GAPDH-201ENST00000229239 CSMD3Q7Z407 3707 aa11.1□□□□□ -0.63
GAPDH-201ENST00000229239 C14orf132Q9NPU4 83 aa11.1□□□□□ -0.63
GAPDH-201ENST00000229239 DYNC2H1Q8NCM8 4307 aaKnown RBP11.09□□□□□ -0.63
GAPDH-201ENST00000229239 ZNF73O43830 326 aaPredicted RBP11.09□□□□□ -0.63
GAPDH-201ENST00000229239 C9orf129Q5T035 196 aaKnown RBP11.08□□□□□ -0.64
GAPDH-201ENST00000229239 STARD9Q9P2P6 4700 aa11.08□□□□□ -0.64
GAPDH-201ENST00000229239 CCKP06307 115 aa11.07□□□□□ -0.64
GAPDH-201ENST00000229239 COX7BP24311 80 aa11.07□□□□□ -0.64
GAPDH-201ENST00000229239 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.06□□□□□ -0.64
GAPDH-201ENST00000229239 ANAPC13Q9BS18 74 aa11.06□□□□□ -0.64
GAPDH-201ENST00000229239 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
GAPDH-201ENST00000229239 NDUFV3P56181 108 aaKnown RBP11.06□□□□□ -0.64
GAPDH-201ENST00000229239 ELOF1P60002 83 aaKnown RBP11.06□□□□□ -0.64
GAPDH-201ENST00000229239 Q6ZRP5 223 aa11.06□□□□□ -0.64
GAPDH-201ENST00000229239 SMCR5Q8TEV8 140 aa11.04□□□□□ -0.64
GAPDH-201ENST00000229239 PDE6GP18545 87 aa11.04□□□□□ -0.64
GAPDH-201ENST00000229239 LYSTQ99698 3801 aa11.04□□□□□ -0.64
GAPDH-201ENST00000229239 USP17L23D6RBM5 183 aa11.03□□□□□ -0.64
GAPDH-201ENST00000229239 TENM2Q9NT68 2774 aa11.03□□□□□ -0.64
GAPDH-201ENST00000229239 SACSQ9NZJ4 4579 aa11.02□□□□□ -0.64
GAPDH-201ENST00000229239 RBM3P98179 157 aaKnown RBP11.02□□□□□ -0.65
GAPDH-201ENST00000229239 NKAPP1Q8N9T2 125 aa11.01□□□□□ -0.65
GAPDH-201ENST00000229239 LOC110117498A0A087WWA1 95 aa11□□□□□ -0.65
GAPDH-201ENST00000229239 RYR2Q92736 4967 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms