RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 FAM229AH3BQW9 127 aa14.79□□□□□ -0.04
HOMER3-201ENST00000221222 ZNF815PA8K554 130 aa14.78□□□□□ -0.04
HOMER3-201ENST00000221222 HSBP1L1C9JCN9 74 aa14.78□□□□□ -0.04
HOMER3-201ENST00000221222 SERTAD4-AS1Q5TG53 156 aa14.78□□□□□ -0.04
HOMER3-201ENST00000221222 TTTY13Q9BZ97 58 aa14.78□□□□□ -0.04
HOMER3-201ENST00000221222 JOSD1Q15040 202 aaPredicted RBP14.77□□□□□ -0.04
HOMER3-201ENST00000221222 C7orf33Q8WU49 177 aa14.77□□□□□ -0.04
HOMER3-201ENST00000221222 MIR7-3HGQ8N6C7 128 aa14.76□□□□□ -0.05
HOMER3-201ENST00000221222 M0QXV9 152 aa14.74□□□□□ -0.05
HOMER3-201ENST00000221222 PHF5AQ7RTV0 110 aaKnown RBP14.74□□□□□ -0.05
HOMER3-201ENST00000221222 SRRM2Q9UQ35 2752 aaKnown RBP14.74□□□□□ -0.05
HOMER3-201ENST00000221222 IGLV5-37A0A075B6J1 123 aa14.73□□□□□ -0.05
HOMER3-201ENST00000221222 PCP2Q8IVA1 136 aa14.73□□□□□ -0.05
HOMER3-201ENST00000221222 TP73-AS1Q9UF72 201 aa14.73□□□□□ -0.05
HOMER3-201ENST00000221222 C22orf24Q9Y442 160 aa14.73□□□□□ -0.05
HOMER3-201ENST00000221222 TIMM17BO60830 172 aa14.72□□□□□ -0.05
HOMER3-201ENST00000221222 PLA2G1BP04054 148 aaKnown RBP14.72□□□□□ -0.05
HOMER3-201ENST00000221222 RPL37AP61513 92 aaKnown RBP14.71□□□□□ -0.06
HOMER3-201ENST00000221222 DAND5Q8N907 189 aa14.71□□□□□ -0.06
HOMER3-201ENST00000221222 LITAFQ99732 161 aa14.71□□□□□ -0.06
HOMER3-201ENST00000221222 LOC107984156A0A0G2JMH3 177 aa14.7□□□□□ -0.06
HOMER3-201ENST00000221222 VPREB1P12018 145 aa14.7□□□□□ -0.06
HOMER3-201ENST00000221222 KRTAP10-4P60372 401 aaPredicted RBP14.7□□□□□ -0.06
HOMER3-201ENST00000221222 ARL17AQ8IVW1 177 aa14.7□□□□□ -0.06
HOMER3-201ENST00000221222 MYCBP2O75592 4640 aa14.69□□□□□ -0.06
HOMER3-201ENST00000221222 RPL24P83731 157 aaKnown RBP14.69□□□□□ -0.06
HOMER3-201ENST00000221222 ADAMTSL4-AS1Q5T5F5 129 aa14.69□□□□□ -0.06
HOMER3-201ENST00000221222 LBHQ53QV2 105 aaPredicted RBP14.68□□□□□ -0.06
HOMER3-201ENST00000221222 PYY3Q5JQD4 70 aa14.68□□□□□ -0.06
HOMER3-201ENST00000221222 Q8NDZ9 215 aa14.68□□□□□ -0.06
HOMER3-201ENST00000221222 MRPL55Q7Z7F7 128 aaKnown RBP14.67□□□□□ -0.06
HOMER3-201ENST00000221222 NKAPP1Q8N9T2 125 aa14.67□□□□□ -0.06
HOMER3-201ENST00000221222 SCGB1D4Q6XE38 83 aa14.66□□□□□ -0.06
HOMER3-201ENST00000221222 BOD1L2Q8IYS8 172 aa14.65□□□□□ -0.06
HOMER3-201ENST00000221222 PRR3P79522 188 aaKnown RBP14.64□□□□□ -0.07
HOMER3-201ENST00000221222 UBE2BP63146 152 aa14.63□□□□□ -0.07
HOMER3-201ENST00000221222 KRTAP11-1Q8IUC1 163 aa14.63□□□□□ -0.07
HOMER3-201ENST00000221222 MIEN1Q9BRT3 115 aa14.63□□□□□ -0.07
HOMER3-201ENST00000221222 VAMP8Q9BV40 100 aa14.63□□□□□ -0.07
HOMER3-201ENST00000221222 TMEM238C9JI98 176 aa14.62□□□□□ -0.07
HOMER3-201ENST00000221222 LINC00167Q96N53 147 aa14.62□□□□□ -0.07
HOMER3-201ENST00000221222 SOSTDC1Q6X4U4 206 aa14.61□□□□□ -0.07
HOMER3-201ENST00000221222 PSORS1C2Q9UIG4 136 aa14.61□□□□□ -0.07
HOMER3-201ENST00000221222 PAM16Q9Y3D7 125 aa14.61□□□□□ -0.07
HOMER3-201ENST00000221222 COX8AP10176 69 aa14.6□□□□□ -0.07
HOMER3-201ENST00000221222 SPATA45Q537H7 98 aa14.6□□□□□ -0.07
HOMER3-201ENST00000221222 SPANXDQ9BXN6 97 aa14.6□□□□□ -0.07
HOMER3-201ENST00000221222 SPANXCQ9NY87 97 aa14.6□□□□□ -0.07
HOMER3-201ENST00000221222 LINC00308Q8TCZ7 52 aa14.6□□□□□ -0.07
HOMER3-201ENST00000221222 EIF4EBP3O60516 100 aaPredicted RBP14.59□□□□□ -0.07
HOMER3-201ENST00000221222 GAGE10A6NGK3 116 aa14.58□□□□□ -0.08
HOMER3-201ENST00000221222 NDUFC2O95298 119 aa14.58□□□□□ -0.08
HOMER3-201ENST00000221222 NPC2P61916 151 aa14.58□□□□□ -0.08
HOMER3-201ENST00000221222 M0R378 163 aa14.57□□□□□ -0.08
HOMER3-201ENST00000221222 DLEU1O43261 78 aa14.57□□□□□ -0.08
HOMER3-201ENST00000221222 Q6ZVH6 145 aa14.57□□□□□ -0.08
HOMER3-201ENST00000221222 RPL37AP8A6NKH3 93 aa14.56□□□□□ -0.08
HOMER3-201ENST00000221222 IGLV1-50A0A075B6I6 118 aa14.54□□□□□ -0.08
HOMER3-201ENST00000221222 C1orf137Q5JT78 98 aa14.54□□□□□ -0.08
HOMER3-201ENST00000221222 PPDPFQ9H3Y8 114 aa14.54□□□□□ -0.08
HOMER3-201ENST00000221222 TRBV10-2A0A0K0K1G8 114 aa14.53□□□□□ -0.08
HOMER3-201ENST00000221222 NCR3O14931 201 aa14.53□□□□□ -0.08
HOMER3-201ENST00000221222 IFITM1P13164 125 aa14.53□□□□□ -0.08
HOMER3-201ENST00000221222 C14orf144Q96I85 54 aa14.53□□□□□ -0.08
HOMER3-201ENST00000221222 SPANXB1Q9NS25 103 aaPredicted RBP14.53□□□□□ -0.08
HOMER3-201ENST00000221222 J3QL48 77 aa14.52□□□□□ -0.08
HOMER3-201ENST00000221222 COPS9Q8WXC6 57 aa14.52□□□□□ -0.08
HOMER3-201ENST00000221222 IGKV2-28A0A075B6P5 120 aa14.51□□□□□ -0.09
HOMER3-201ENST00000221222 IGKV2D-28P01615 120 aa14.51□□□□□ -0.09
HOMER3-201ENST00000221222 HNRNPA3P51991 378 aaKnown RBP14.51□□□□□ -0.09
HOMER3-201ENST00000221222 SLC25A34Q6PIV7 304 aa14.49□□□□□ -0.09
HOMER3-201ENST00000221222 IGLV7-43P04211 117 aa14.47□□□□□ -0.09
HOMER3-201ENST00000221222 MUSTN1Q8IVN3 82 aa14.47□□□□□ -0.09
HOMER3-201ENST00000221222 SRSF9Q13242 221 aaKnown RBP eCLIP14.47□□□□□ -0.09
HOMER3-201ENST00000221222 BCE1O60756 84 aa14.46□□□□□ -0.1
HOMER3-201ENST00000221222 TRBV10-3A0A0K0K1G6 114 aa14.45□□□□□ -0.1
HOMER3-201ENST00000221222 S100A12P80511 92 aa14.45□□□□□ -0.1
HOMER3-201ENST00000221222 HIGD1BQ9P298 99 aa14.45□□□□□ -0.1
HOMER3-201ENST00000221222 DDTP30046 118 aa14.44□□□□□ -0.1
HOMER3-201ENST00000221222 REG3GQ6UW15 175 aa14.44□□□□□ -0.1
HOMER3-201ENST00000221222 TMEM126AQ9H061 195 aa14.44□□□□□ -0.1
HOMER3-201ENST00000221222 KCNQ1DNQ9H478 68 aa14.44□□□□□ -0.1
HOMER3-201ENST00000221222 LOC105371267A0A1B0GV96 52 aa14.43□□□□□ -0.1
HOMER3-201ENST00000221222 IGLV6-57P01721 117 aa14.43□□□□□ -0.1
HOMER3-201ENST00000221222 SPINK6Q6UWN8 80 aa14.43□□□□□ -0.1
HOMER3-201ENST00000221222 PKHD1L1Q86WI1 4243 aa14.43□□□□□ -0.1
HOMER3-201ENST00000221222 PRYO14603 147 aa14.42□□□□□ -0.1
HOMER3-201ENST00000221222 LINC00518Q8N0U6 118 aa14.42□□□□□ -0.1
HOMER3-201ENST00000221222 SMIM6P0DI80 62 aa14.41□□□□□ -0.1
HOMER3-201ENST00000221222 S100A7L2Q5SY68 101 aa14.41□□□□□ -0.1
HOMER3-201ENST00000221222 C2orf91Q6ZV80 131 aa14.41□□□□□ -0.1
HOMER3-201ENST00000221222 HIST1H4GQ99525 98 aa14.39□□□□□ -0.11
HOMER3-201ENST00000221222 ZNF861PO60384 105 aa14.38□□□□□ -0.11
HOMER3-201ENST00000221222 SPRR1AP35321 89 aa14.38□□□□□ -0.11
HOMER3-201ENST00000221222 KRTAP29-1A8MX34 341 aaPredicted RBP14.37□□□□□ -0.11
HOMER3-201ENST00000221222 KRTAP13-1Q8IUC0 172 aa14.37□□□□□ -0.11
HOMER3-201ENST00000221222 LINC00337Q8N6G1 96 aa14.37□□□□□ -0.11
HOMER3-201ENST00000221222 RPL28P46779 137 aaKnown RBP14.36□□□□□ -0.11
HOMER3-201ENST00000221222 FAM19A1Q7Z5A9 133 aa14.34□□□□□ -0.11
HOMER3-201ENST00000221222 DIRC1Q969H9 104 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms