RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 F8WDY8 70 aa19.71■□□□□ 0.75
PABPN1-201ENST00000216727 UPK3BQ9BT76 320 aa19.71■□□□□ 0.75
PABPN1-201ENST00000216727 B9D2Q9BPU9 175 aa19.68■□□□□ 0.74
PABPN1-201ENST00000216727 Q9HAA7 133 aa19.68■□□□□ 0.74
PABPN1-201ENST00000216727 A0A087WYN8 130 aa19.66■□□□□ 0.74
PABPN1-201ENST00000216727 Q6ZRU5 148 aa19.66■□□□□ 0.74
PABPN1-201ENST00000216727 DNAH9Q9NYC9 4486 aa19.66■□□□□ 0.74
PABPN1-201ENST00000216727 NCR3O14931 201 aa19.66■□□□□ 0.74
PABPN1-201ENST00000216727 BAALC-AS2P0C853 105 aa19.65■□□□□ 0.74
PABPN1-201ENST00000216727 DNAL4O96015 105 aa19.63■□□□□ 0.73
PABPN1-201ENST00000216727 CDIP1Q9H305 208 aa19.63■□□□□ 0.73
PABPN1-201ENST00000216727 S100A7L2Q5SY68 101 aa19.62■□□□□ 0.73
PABPN1-201ENST00000216727 STAB2Q8WWQ8 2551 aa19.61■□□□□ 0.73
PABPN1-201ENST00000216727 SIGMAR1Q99720 223 aa19.6■□□□□ 0.73
PABPN1-201ENST00000216727 NDUFC2-KCTD14E9PQ53 114 aa19.59■□□□□ 0.73
PABPN1-201ENST00000216727 XAGE1AQ9HD64 81 aa19.59■□□□□ 0.73
PABPN1-201ENST00000216727 COL7A1Q02388 2944 aa19.59■□□□□ 0.73
PABPN1-201ENST00000216727 RMI2Q96E14 147 aa19.59■□□□□ 0.73
PABPN1-201ENST00000216727 IGLV6-57P01721 117 aa19.58■□□□□ 0.73
PABPN1-201ENST00000216727 A0A1B0GX51 115 aa19.58■□□□□ 0.72
PABPN1-201ENST00000216727 LECT2O14960 151 aa19.58■□□□□ 0.72
PABPN1-201ENST00000216727 C22orf24Q9Y442 160 aa19.58■□□□□ 0.72
PABPN1-201ENST00000216727 SYCNQ0VAF6 134 aa19.57■□□□□ 0.72
PABPN1-201ENST00000216727 RPL18AQ02543 176 aaKnown RBP19.56■□□□□ 0.72
PABPN1-201ENST00000216727 DNAH1Q9P2D7 4330 aa19.54■□□□□ 0.72
PABPN1-201ENST00000216727 PCP4P48539 62 aa19.53■□□□□ 0.72
PABPN1-201ENST00000216727 C6orf99Q4VX62 202 aa19.52■□□□□ 0.72
PABPN1-201ENST00000216727 LINC00167Q96N53 147 aa19.51■□□□□ 0.71
PABPN1-201ENST00000216727 VPREB1P12018 145 aa19.49■□□□□ 0.71
PABPN1-201ENST00000216727 USP17L23D6RBM5 183 aa19.48■□□□□ 0.71
PABPN1-201ENST00000216727 Q6ZRP5 223 aa19.48■□□□□ 0.71
PABPN1-201ENST00000216727 Q8N814 137 aa19.48■□□□□ 0.71
PABPN1-201ENST00000216727 APLNQ9ULZ1 77 aa19.48■□□□□ 0.71
PABPN1-201ENST00000216727 FAM240AA0A1B0GVK7 77 aa19.47■□□□□ 0.71
PABPN1-201ENST00000216727 NHLRC4P0CG21 123 aaPredicted RBP19.47■□□□□ 0.71
PABPN1-201ENST00000216727 CASC10Q5T4H9 136 aa19.46■□□□□ 0.71
PABPN1-201ENST00000216727 TRBV10-3A0A0K0K1G6 114 aa19.46■□□□□ 0.71
PABPN1-201ENST00000216727 GAGE2EQ4V326 116 aa19.45■□□□□ 0.7
PABPN1-201ENST00000216727 ORMDL1Q9P0S3 153 aa19.45■□□□□ 0.7
PABPN1-201ENST00000216727 GAGE2DQ9UEU5 116 aa19.45■□□□□ 0.7
PABPN1-201ENST00000216727 TLX1NBP0CAT3 122 aa19.44■□□□□ 0.7
PABPN1-201ENST00000216727 DYNC2H1Q8NCM8 4307 aaKnown RBP19.43■□□□□ 0.7
PABPN1-201ENST00000216727 SNCGO76070 127 aa19.43■□□□□ 0.7
PABPN1-201ENST00000216727 M0R378 163 aa19.42■□□□□ 0.7
PABPN1-201ENST00000216727 INAFM2P0DMQ5 153 aa19.42■□□□□ 0.7
PABPN1-201ENST00000216727 TRAV23DV6A0A075B6W5 121 aa19.42■□□□□ 0.7
PABPN1-201ENST00000216727 SLPIP03973 132 aa19.42■□□□□ 0.7
PABPN1-201ENST00000216727 XGP55808 180 aa19.42■□□□□ 0.7
PABPN1-201ENST00000216727 LINC00575Q6W349 94 aa19.42■□□□□ 0.7
PABPN1-201ENST00000216727 C9orf129Q5T035 196 aaKnown RBP19.39■□□□□ 0.69
PABPN1-201ENST00000216727 OBSCN-AS1Q96MR7 158 aa19.39■□□□□ 0.69
PABPN1-201ENST00000216727 UBE2DNLQ8IWF7 75 aa19.37■□□□□ 0.69
PABPN1-201ENST00000216727 SCGB1A1P11684 91 aa19.37■□□□□ 0.69
PABPN1-201ENST00000216727 MT-ATP8P03928 68 aa19.36■□□□□ 0.69
PABPN1-201ENST00000216727 DIRC1Q969H9 104 aa19.36■□□□□ 0.69
PABPN1-201ENST00000216727 KRTAP1-5Q9BYS1 174 aa19.36■□□□□ 0.69
PABPN1-201ENST00000216727 ACYP1P07311 99 aa19.35■□□□□ 0.69
PABPN1-201ENST00000216727 ZNF73O43830 326 aaPredicted RBP19.35■□□□□ 0.69
PABPN1-201ENST00000216727 TRBV7-6A0A0J9YX20 115 aa19.33■□□□□ 0.68
PABPN1-201ENST00000216727 hADV29S1A0JD25 119 aa19.33■□□□□ 0.68
PABPN1-201ENST00000216727 NUPR2A6NF83 97 aa19.32■□□□□ 0.68
PABPN1-201ENST00000216727 TMEM256-PLSCR3K7ERE1 68 aa19.32■□□□□ 0.68
PABPN1-201ENST00000216727 PLA2G2DQ9UNK4 145 aa19.31■□□□□ 0.68
PABPN1-201ENST00000216727 ELOF1P60002 83 aaKnown RBP19.27■□□□□ 0.67
PABPN1-201ENST00000216727 LYSTQ99698 3801 aa19.27■□□□□ 0.67
PABPN1-201ENST00000216727 COX7BP24311 80 aa19.26■□□□□ 0.67
PABPN1-201ENST00000216727 SERTAD4-AS1Q5TG53 156 aa19.25■□□□□ 0.67
PABPN1-201ENST00000216727 NKAPP1Q8N9T2 125 aa19.25■□□□□ 0.67
PABPN1-201ENST00000216727 CSMD3Q7Z407 3707 aa19.24■□□□□ 0.67
PABPN1-201ENST00000216727 C21orf62-AS1Q17RA5 79 aa19.24■□□□□ 0.67
PABPN1-201ENST00000216727 C14orf132Q9NPU4 83 aa19.24■□□□□ 0.67
PABPN1-201ENST00000216727 JMJD7-PLA2G4BH0Y9G9 81 aa19.23■□□□□ 0.67
PABPN1-201ENST00000216727 IGLV5-37A0A075B6J1 123 aa19.21■□□□□ 0.67
PABPN1-201ENST00000216727 LOC107984640A0A0U1RRK4 108 aa19.2■□□□□ 0.66
PABPN1-201ENST00000216727 H3BQ85 93 aa19.2■□□□□ 0.66
PABPN1-201ENST00000216727 GAGE2AQ6NT46 116 aa19.2■□□□□ 0.66
PABPN1-201ENST00000216727 PSCAO43653 123 aa19.19■□□□□ 0.66
PABPN1-201ENST00000216727 C7orf33Q8WU49 177 aa19.19■□□□□ 0.66
PABPN1-201ENST00000216727 KCNQ1DNQ9H478 68 aa19.19■□□□□ 0.66
PABPN1-201ENST00000216727 PLECQ15149 4684 aaKnown RBP19.18■□□□□ 0.66
PABPN1-201ENST00000216727 PRKDCP78527 4128 aaKnown RBP19.18■□□□□ 0.66
PABPN1-201ENST00000216727 SDIM1Q6ZPB5 146 aa19.17■□□□□ 0.66
PABPN1-201ENST00000216727 Q6ZQY7 126 aa19.17■□□□□ 0.66
PABPN1-201ENST00000216727 GAGE2BQ13066 116 aa19.17■□□□□ 0.66
PABPN1-201ENST00000216727 CNBPP62633 177 aaKnown RBP19.16■□□□□ 0.66
PABPN1-201ENST00000216727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP19.16■□□□□ 0.66
PABPN1-201ENST00000216727 TTC32Q5I0X7 151 aa19.15■□□□□ 0.66
PABPN1-201ENST00000216727 LINC00528Q8N1L1 170 aa19.15■□□□□ 0.66
PABPN1-201ENST00000216727 DNHD1Q96M86 4753 aa19.13■□□□□ 0.65
PABPN1-201ENST00000216727 NBDYA0A0U1RRE5 68 aa19.12■□□□□ 0.65
PABPN1-201ENST00000216727 FAM168BA1KXE4 195 aa19.12■□□□□ 0.65
PABPN1-201ENST00000216727 DNAH7Q8WXX0 4024 aa19.12■□□□□ 0.65
PABPN1-201ENST00000216727 DNAH10Q8IVF4 4471 aa19.12■□□□□ 0.65
PABPN1-201ENST00000216727 C14orf177Q52M58 125 aa19.12■□□□□ 0.65
PABPN1-201ENST00000216727 GHRHP01286 108 aa19.11■□□□□ 0.65
PABPN1-201ENST00000216727 TENM2Q9NT68 2774 aa19.11■□□□□ 0.65
PABPN1-201ENST00000216727 KRTAP7-1Q8IUC3 87 aa19.1■□□□□ 0.65
PABPN1-201ENST00000216727 MEGF8Q7Z7M0 2845 aa19.1■□□□□ 0.65
PABPN1-201ENST00000216727 SMCR5Q8TEV8 140 aa19.09■□□□□ 0.65
PABPN1-201ENST00000216727 A0A1B0GV72 72 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms