RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 CRIP1P50238 77 aa12.77□□□□□ -0.37
CACNA1A-225ENST00000636389 Q8N814 137 aa12.77□□□□□ -0.37
CACNA1A-225ENST00000636389 XGP55808 180 aa12.76□□□□□ -0.37
CACNA1A-225ENST00000636389 PSMG3-AS1Q96PY0 264 aa12.76□□□□□ -0.37
CACNA1A-225ENST00000636389 Q9UF83 564 aa12.76□□□□□ -0.37
CACNA1A-225ENST00000636389 U3KQK5 164 aa12.76□□□□□ -0.37
CACNA1A-225ENST00000636389 SPACA4Q8TDM5 124 aa12.75□□□□□ -0.37
CACNA1A-225ENST00000636389 COX6A2Q02221 97 aa12.75□□□□□ -0.37
CACNA1A-225ENST00000636389 LTBP2Q14767 1821 aa12.74□□□□□ -0.37
CACNA1A-225ENST00000636389 WISP2O76076 250 aa12.73□□□□□ -0.37
CACNA1A-225ENST00000636389 A0A1B0GU69 56 aa12.73□□□□□ -0.37
CACNA1A-225ENST00000636389 A0A087WSZ3 146 aa12.72□□□□□ -0.37
CACNA1A-225ENST00000636389 Q6ZS46 218 aa12.72□□□□□ -0.37
CACNA1A-225ENST00000636389 IGLV8-61A0A075B6I0 122 aa12.71□□□□□ -0.37
CACNA1A-225ENST00000636389 Q6JHZ5 121 aa12.71□□□□□ -0.37
CACNA1A-225ENST00000636389 CDC42SE2Q9NRR3 84 aa12.71□□□□□ -0.38
CACNA1A-225ENST00000636389 NRACQ8N912 160 aa12.7□□□□□ -0.38
CACNA1A-225ENST00000636389 A0A087WYN8 130 aa12.7□□□□□ -0.38
CACNA1A-225ENST00000636389 Q6ZTC4 211 aa12.69□□□□□ -0.38
CACNA1A-225ENST00000636389 COL27A1Q8IZC6 1860 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-225ENST00000636389 ACYP2P14621 99 aa12.68□□□□□ -0.38
CACNA1A-225ENST00000636389 A0A1W2PNU3 283 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-225ENST00000636389 FN1P02751 2386 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-225ENST00000636389 Q8N3U1 123 aa12.66□□□□□ -0.38
CACNA1A-225ENST00000636389 EGFEM1PQ0D2K5 195 aa12.66□□□□□ -0.38
CACNA1A-225ENST00000636389 C1orf64Q8NEQ6 169 aa12.64□□□□□ -0.39
CACNA1A-225ENST00000636389 A0A087WVE0 104 aa12.64□□□□□ -0.39
CACNA1A-225ENST00000636389 PRR9Q5T870 116 aa12.64□□□□□ -0.39
CACNA1A-225ENST00000636389 MUC7Q8TAX7 377 aa12.64□□□□□ -0.39
CACNA1A-225ENST00000636389 FSTL3O95633 263 aa12.63□□□□□ -0.39
CACNA1A-225ENST00000636389 A8MTW9 85 aa12.62□□□□□ -0.39
CACNA1A-225ENST00000636389 C1orf229Q6ZS94 237 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-225ENST00000636389 FAM229AH3BQW9 127 aa12.6□□□□□ -0.39
CACNA1A-225ENST00000636389 YPEL4Q96NS1 127 aa12.6□□□□□ -0.39
CACNA1A-225ENST00000636389 MOBPQ13875 183 aa12.6□□□□□ -0.39
CACNA1A-225ENST00000636389 PIEZO2Q9H5I5 2752 aa12.6□□□□□ -0.39
CACNA1A-225ENST00000636389 COL4A3Q01955 1670 aa12.58□□□□□ -0.4
CACNA1A-225ENST00000636389 TLN2Q9Y4G6 2542 aa12.58□□□□□ -0.4
CACNA1A-225ENST00000636389 IGLV4-60A0A075B6I1 120 aa12.58□□□□□ -0.4
CACNA1A-225ENST00000636389 KLLNB2CW77 178 aa12.57□□□□□ -0.4
CACNA1A-225ENST00000636389 C11orf71Q6IPW1 123 aa12.56□□□□□ -0.4
CACNA1A-225ENST00000636389 EDN2P20800 178 aa12.56□□□□□ -0.4
CACNA1A-225ENST00000636389 FLG2Q5D862 2391 aaPredicted RBP12.55□□□□□ -0.4
CACNA1A-225ENST00000636389 J3QL48 77 aa12.54□□□□□ -0.4
CACNA1A-225ENST00000636389 C6orf48Q9UBA6 75 aa12.54□□□□□ -0.4
CACNA1A-225ENST00000636389 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
CACNA1A-225ENST00000636389 LINC00574Q9H8X3 128 aa12.54□□□□□ -0.4
CACNA1A-225ENST00000636389 GAS8-AS1O95177 125 aa12.54□□□□□ -0.4
CACNA1A-225ENST00000636389 P0C879 139 aa12.53□□□□□ -0.4
CACNA1A-225ENST00000636389 LINC00242Q5T6M2 205 aa12.53□□□□□ -0.4
CACNA1A-225ENST00000636389 SSBP3-AS1Q7Z2R9 100 aa12.52□□□□□ -0.4
CACNA1A-225ENST00000636389 NAV2Q8IVL1 2488 aa12.52□□□□□ -0.41
CACNA1A-225ENST00000636389 COX6B2Q6YFQ2 88 aa12.51□□□□□ -0.41
CACNA1A-225ENST00000636389 TMEM254Q8TBM7 123 aa12.51□□□□□ -0.41
CACNA1A-225ENST00000636389 SMCR5Q8TEV8 140 aa12.51□□□□□ -0.41
CACNA1A-225ENST00000636389 CHTF8P0CG12 524 aa12.5□□□□□ -0.41
CACNA1A-225ENST00000636389 SMIM1B2RUZ4 78 aa12.5□□□□□ -0.41
CACNA1A-225ENST00000636389 LINC00313P59037 77 aa12.5□□□□□ -0.41
CACNA1A-225ENST00000636389 ATP11AUNQ6ZP68 121 aa12.49□□□□□ -0.41
CACNA1A-225ENST00000636389 POLR2KP53803 58 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-225ENST00000636389 FHL2Q14192 279 aa12.49□□□□□ -0.41
CACNA1A-225ENST00000636389 TYMSOSQ8TAI1 123 aa12.49□□□□□ -0.41
CACNA1A-225ENST00000636389 C11orf21Q9P2W6 132 aa12.49□□□□□ -0.41
CACNA1A-225ENST00000636389 C11orf1Q9H5F2 150 aa12.48□□□□□ -0.41
CACNA1A-225ENST00000636389 IGLV1-40P01703 118 aa12.48□□□□□ -0.41
CACNA1A-225ENST00000636389 SMIM29Q86T20 159 aa12.48□□□□□ -0.41
CACNA1A-225ENST00000636389 LYPD5Q6UWN5 251 aa12.47□□□□□ -0.41
CACNA1A-225ENST00000636389 CXCL6P80162 114 aa12.47□□□□□ -0.41
CACNA1A-225ENST00000636389 SRCAPQ6ZRS2 3230 aa12.47□□□□□ -0.41
CACNA1A-225ENST00000636389 BRWD1-AS2P59051 145 aa12.47□□□□□ -0.41
CACNA1A-225ENST00000636389 CHCHD7Q9BUK0 85 aa12.47□□□□□ -0.41
CACNA1A-225ENST00000636389 ABCA12Q86UK0 2595 aa12.47□□□□□ -0.41
CACNA1A-225ENST00000636389 C22orf24Q9Y442 160 aa12.47□□□□□ -0.41
CACNA1A-225ENST00000636389 MDFIQ99750 246 aa12.46□□□□□ -0.41
CACNA1A-225ENST00000636389 PIEZO1Q92508 2521 aa12.46□□□□□ -0.41
CACNA1A-225ENST00000636389 NHLRC4P0CG21 123 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-225ENST00000636389 Q6ZRU5 148 aa12.46□□□□□ -0.42
CACNA1A-225ENST00000636389 TLN1Q9Y490 2541 aaKnown RBP12.45□□□□□ -0.42
CACNA1A-225ENST00000636389 C16orf90A8MZG2 172 aa12.45□□□□□ -0.42
CACNA1A-225ENST00000636389 PCSK5Q92824 1860 aa12.44□□□□□ -0.42
CACNA1A-225ENST00000636389 PRO0628Q9UI54 55 aa12.44□□□□□ -0.42
CACNA1A-225ENST00000636389 Q8N6K4 173 aa12.44□□□□□ -0.42
CACNA1A-225ENST00000636389 IGIPA6NJ69 53 aa12.44□□□□□ -0.42
CACNA1A-225ENST00000636389 F8WDY8 70 aa12.43□□□□□ -0.42
CACNA1A-225ENST00000636389 Q96NJ1 140 aa12.43□□□□□ -0.42
CACNA1A-225ENST00000636389 C8orf87E5RJ46 101 aa12.43□□□□□ -0.42
CACNA1A-225ENST00000636389 KIAA0087Q14695 138 aa12.43□□□□□ -0.42
CACNA1A-225ENST00000636389 APLNQ9ULZ1 77 aa12.43□□□□□ -0.42
CACNA1A-225ENST00000636389 ADAMTSL4-AS1Q5T5F5 129 aa12.42□□□□□ -0.42
CACNA1A-225ENST00000636389 Q8N2B8 174 aa12.42□□□□□ -0.42
CACNA1A-225ENST00000636389 ODF3L2Q3SX64 289 aa12.41□□□□□ -0.42
CACNA1A-225ENST00000636389 EIF4EBP1Q13541 118 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-225ENST00000636389 ZNF462Q96JM2 2506 aa12.41□□□□□ -0.42
CACNA1A-225ENST00000636389 TP53AIP1Q9HCN2 124 aa12.4□□□□□ -0.42
CACNA1A-225ENST00000636389 IGLV1-51P01701 117 aa12.4□□□□□ -0.42
CACNA1A-225ENST00000636389 SETD2Q9BYW2 2564 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-225ENST00000636389 FHL3Q13643 280 aa12.38□□□□□ -0.43
CACNA1A-225ENST00000636389 ZNF580Q9UK33 172 aa12.37□□□□□ -0.43
CACNA1A-225ENST00000636389 JMJD1CQ15652 2540 aa12.36□□□□□ -0.43
CACNA1A-225ENST00000636389 ANKRD17O75179 2603 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms