RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TOMM7Q9P0U1 55 aa8.9□□□□□ -0.98
SNRPA1-216ENST00000626000 TRAV12-1A0A0B4J245 112 aa8.89□□□□□ -0.99
SNRPA1-216ENST00000626000 PANO1I0J062 215 aa8.89□□□□□ -0.99
SNRPA1-216ENST00000626000 INAFM2P0DMQ5 153 aa8.89□□□□□ -0.99
SNRPA1-216ENST00000626000 RPL18AQ02543 176 aaKnown RBP8.89□□□□□ -0.99
SNRPA1-216ENST00000626000 GAGE2BQ13066 116 aa8.89□□□□□ -0.99
SNRPA1-216ENST00000626000 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
SNRPA1-216ENST00000626000 SFTA2Q6UW10 78 aa8.89□□□□□ -0.99
SNRPA1-216ENST00000626000 IFI27L1Q96BM0 104 aa8.89□□□□□ -0.99
SNRPA1-216ENST00000626000 KRTAP4-5Q9BYR2 181 aa8.89□□□□□ -0.99
SNRPA1-216ENST00000626000 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
SNRPA1-216ENST00000626000 F8VRH5 84 aa8.88□□□□□ -0.99
SNRPA1-216ENST00000626000 RPL37AP61513 92 aaKnown RBP8.88□□□□□ -0.99
SNRPA1-216ENST00000626000 UNQ6190/PRO20217Q6UXQ8 127 aa8.88□□□□□ -0.99
SNRPA1-216ENST00000626000 C6orf48Q9UBA6 75 aa8.88□□□□□ -0.99
SNRPA1-216ENST00000626000 DNAH8Q96JB1 4490 aa8.87□□□□□ -0.99
SNRPA1-216ENST00000626000 NDUFC2-KCTD14E9PQ53 114 aa8.87□□□□□ -0.99
SNRPA1-216ENST00000626000 HSPB8Q9UJY1 196 aa8.87□□□□□ -0.99
SNRPA1-216ENST00000626000 LEPROTL1O95214 131 aa8.86□□□□□ -0.99
SNRPA1-216ENST00000626000 S100A1P23297 94 aa8.86□□□□□ -0.99
SNRPA1-216ENST00000626000 LORP23490 312 aaPredicted RBP8.86□□□□□ -0.99
SNRPA1-216ENST00000626000 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
SNRPA1-216ENST00000626000 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
SNRPA1-216ENST00000626000 SERF1AO75920 110 aa8.85□□□□□ -0.99
SNRPA1-216ENST00000626000 C10orf25Q5T742 122 aa8.85□□□□□ -0.99
SNRPA1-216ENST00000626000 C2orf82Q6UX34 121 aa8.85□□□□□ -0.99
SNRPA1-216ENST00000626000 ABCA13Q86UQ4 5058 aa8.84□□□□□ -0.99
SNRPA1-216ENST00000626000 IGLV5-39A0A0G2JS06 123 aa8.83□□□□□ -1
SNRPA1-216ENST00000626000 SPINK8P0C7L1 97 aa8.83□□□□□ -1
SNRPA1-216ENST00000626000 ZNF22P17026 224 aaPredicted RBP8.83□□□□□ -1
SNRPA1-216ENST00000626000 TMEM170BQ5T4T1 132 aa8.83□□□□□ -1
SNRPA1-216ENST00000626000 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
SNRPA1-216ENST00000626000 ODF1Q14990 250 aa8.82□□□□□ -1
SNRPA1-216ENST00000626000 Q6ZRP5 223 aa8.82□□□□□ -1
SNRPA1-216ENST00000626000 FAM19A2Q8N3H0 131 aa8.82□□□□□ -1
SNRPA1-216ENST00000626000 C11orf86A6NJI1 115 aa8.81□□□□□ -1
SNRPA1-216ENST00000626000 SCO1O75880 301 aa8.81□□□□□ -1
SNRPA1-216ENST00000626000 PLNP26678 52 aa8.81□□□□□ -1
SNRPA1-216ENST00000626000 C9orf116Q5BN46 136 aaPredicted RBP8.81□□□□□ -1
SNRPA1-216ENST00000626000 HIST1H2BKO60814 126 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 HIST1H2BJP06899 126 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 HIST1H2BOP23527 126 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 HIST1H2BBP33778 126 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 HIST1H2BDP58876 126 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 HIST1H2BCP62807 126 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 HIST2H2BEQ16778 126 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 GAGE2EQ4V326 116 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.8□□□□□ -1
SNRPA1-216ENST00000626000 HIST1H2BHQ93079 126 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 HIST1H2BNQ99877 126 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 HIST1H2BMQ99879 126 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 GAGE2DQ9UEU5 116 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 FAT1Q14517 4588 aa8.8□□□□□ -1
SNRPA1-216ENST00000626000 LINC00310P59036 64 aa8.79□□□□□ -1
SNRPA1-216ENST00000626000 MAP1LC3CQ9BXW4 147 aa8.79□□□□□ -1
SNRPA1-216ENST00000626000 KRTAP10-4P60372 401 aaPredicted RBP8.78□□□□□ -1
SNRPA1-216ENST00000626000 COX17Q14061 63 aa8.78□□□□□ -1
SNRPA1-216ENST00000626000 VPS13BQ7Z7G8 4022 aa8.76□□□□□ -1.01
SNRPA1-216ENST00000626000 A0A1W2PNN7 141 aa8.76□□□□□ -1.01
SNRPA1-216ENST00000626000 TMEM223A0PJW6 202 aa8.76□□□□□ -1.01
SNRPA1-216ENST00000626000 PRR3P79522 188 aaKnown RBP8.76□□□□□ -1.01
SNRPA1-216ENST00000626000 LINC00587B1AMM8 73 aa8.75□□□□□ -1.01
SNRPA1-216ENST00000626000 H0Y8G0 127 aa8.75□□□□□ -1.01
SNRPA1-216ENST00000626000 DPM2O94777 84 aa8.75□□□□□ -1.01
SNRPA1-216ENST00000626000 FABP4P15090 132 aa8.75□□□□□ -1.01
SNRPA1-216ENST00000626000 HERVK_113P61574 105 aa8.75□□□□□ -1.01
SNRPA1-216ENST00000626000 COA6Q5JTJ3 125 aaKnown RBP8.75□□□□□ -1.01
SNRPA1-216ENST00000626000 M0QXV9 152 aa8.74□□□□□ -1.01
SNRPA1-216ENST00000626000 LBHQ53QV2 105 aaPredicted RBP8.74□□□□□ -1.01
SNRPA1-216ENST00000626000 FAM19A5Q7Z5A7 132 aaPredicted RBP8.74□□□□□ -1.01
SNRPA1-216ENST00000626000 NUPR1O60356 82 aa8.73□□□□□ -1.01
SNRPA1-216ENST00000626000 ATP6V1G1O75348 118 aa8.73□□□□□ -1.01
SNRPA1-216ENST00000626000 OXTP01178 125 aa8.73□□□□□ -1.01
SNRPA1-216ENST00000626000 HERV-K104P63124 156 aa8.73□□□□□ -1.01
SNRPA1-216ENST00000626000 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-216ENST00000626000 TP73-AS1Q9UF72 201 aa8.73□□□□□ -1.01
SNRPA1-216ENST00000626000 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
SNRPA1-216ENST00000626000 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
SNRPA1-216ENST00000626000 PLEKHB2Q96CS7 222 aa8.72□□□□□ -1.01
SNRPA1-216ENST00000626000 XAGE1AQ9HD64 81 aa8.72□□□□□ -1.01
SNRPA1-216ENST00000626000 FLG2Q5D862 2391 aaPredicted RBP8.71□□□□□ -1.01
SNRPA1-216ENST00000626000 KRTAP29-1A8MX34 341 aaPredicted RBP8.71□□□□□ -1.02
SNRPA1-216ENST00000626000 IGKCP01834 107 aa8.71□□□□□ -1.02
SNRPA1-216ENST00000626000 AKR1D1P51857 326 aa8.71□□□□□ -1.02
SNRPA1-216ENST00000626000 UBE2BP63146 152 aa8.71□□□□□ -1.02
SNRPA1-216ENST00000626000 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
SNRPA1-216ENST00000626000 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
SNRPA1-216ENST00000626000 FAM168BA1KXE4 195 aa8.7□□□□□ -1.02
SNRPA1-216ENST00000626000 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
SNRPA1-216ENST00000626000 PET117Q6UWS5 81 aa8.7□□□□□ -1.02
SNRPA1-216ENST00000626000 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
SNRPA1-216ENST00000626000 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
SNRPA1-216ENST00000626000 PFN2P35080 140 aa8.69□□□□□ -1.02
SNRPA1-216ENST00000626000 NMUP48645 174 aa8.69□□□□□ -1.02
SNRPA1-216ENST00000626000 RPL24P83731 157 aaKnown RBP8.69□□□□□ -1.02
SNRPA1-216ENST00000626000 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
SNRPA1-216ENST00000626000 LEPROTO15243 131 aa8.68□□□□□ -1.02
SNRPA1-216ENST00000626000 NKAPP1Q8N9T2 125 aa8.68□□□□□ -1.02
SNRPA1-216ENST00000626000 NDUFA12Q9UI09 145 aa8.68□□□□□ -1.02
SNRPA1-216ENST00000626000 PSORS1C2Q9UIG4 136 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms