RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-223	ENST00000615442	KRTDAP	P60985	99 aa		6.75	□□□□□ -1.33
PVT1-223	ENST00000615442	C10orf25	Q5T742	122 aa		6.75	□□□□□ -1.33
PVT1-223	ENST00000615442	C2orf82	Q6UX34	121 aa		6.75	□□□□□ -1.33
PVT1-223	ENST00000615442		Q6ZSA8	131 aa		6.75	□□□□□ -1.33
PVT1-223	ENST00000615442	HIST1H2BL	Q99880	126 aa		6.75	□□□□□ -1.33
PVT1-223	ENST00000615442	HECTD4	Q9Y4D8	3996 aa		6.75	□□□□□ -1.33
PVT1-223	ENST00000615442	EPPK1	P58107	5090 aa	Known RBP	6.74	□□□□□ -1.33
PVT1-223	ENST00000615442	LOC107984640	A0A0U1RRK4	108 aa		6.74	□□□□□ -1.33
PVT1-223	ENST00000615442	PMCHL2	Q9BQD1	86 aa		6.74	□□□□□ -1.33
PVT1-223	ENST00000615442	C6orf48	Q9UBA6	75 aa		6.74	□□□□□ -1.33
PVT1-223	ENST00000615442	DNAH11	Q96DT5	4516 aa		6.73	□□□□□ -1.33
PVT1-223	ENST00000615442	C20orf202	A1L168	122 aa		6.73	□□□□□ -1.33
PVT1-223	ENST00000615442	TLX1NB	P0CAT3	122 aa		6.73	□□□□□ -1.33
PVT1-223	ENST00000615442	AKR1D1	P51857	326 aa		6.73	□□□□□ -1.33
PVT1-223	ENST00000615442	SFTA2	Q6UW10	78 aa		6.73	□□□□□ -1.33
PVT1-223	ENST00000615442	FAM30A	Q9NZY2	134 aa		6.73	□□□□□ -1.33
PVT1-223	ENST00000615442	LINC00474	Q9P2X8	69 aa		6.73	□□□□□ -1.33
PVT1-223	ENST00000615442	HERVK_113	P61574	105 aa		6.72	□□□□□ -1.33
PVT1-223	ENST00000615442	CIRBP	Q14011	172 aa	Known RBP	6.72	□□□□□ -1.33
PVT1-223	ENST00000615442	XG	P55808	180 aa		6.71	□□□□□ -1.34
PVT1-223	ENST00000615442	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.71	□□□□□ -1.34
PVT1-223	ENST00000615442		A0A096LNI7	61 aa		6.7	□□□□□ -1.34
PVT1-223	ENST00000615442	NDUFC2-KCTD14	E9PQ53	114 aa		6.7	□□□□□ -1.34
PVT1-223	ENST00000615442	LEPROT	O15243	131 aa		6.7	□□□□□ -1.34
PVT1-223	ENST00000615442	PTTG1IP	P53801	180 aa		6.7	□□□□□ -1.34
PVT1-223	ENST00000615442	SPACA4	Q8TDM5	124 aa		6.7	□□□□□ -1.34
PVT1-223	ENST00000615442	PLEKHB2	Q96CS7	222 aa		6.7	□□□□□ -1.34
PVT1-223	ENST00000615442	DPH3	Q96FX2	82 aa		6.7	□□□□□ -1.34
PVT1-223	ENST00000615442	IGKV2-24	A0A0C4DH68	120 aa		6.69	□□□□□ -1.34
PVT1-223	ENST00000615442	GAGE2B	Q13066	116 aa		6.69	□□□□□ -1.34
PVT1-223	ENST00000615442	C9orf116	Q5BN46	136 aa	Predicted RBP	6.69	□□□□□ -1.34
PVT1-223	ENST00000615442		Q6ZRP5	223 aa		6.69	□□□□□ -1.34
PVT1-223	ENST00000615442	ZNF625	Q96I27	306 aa	Predicted RBP	6.69	□□□□□ -1.34
PVT1-223	ENST00000615442		E9PLD3	99 aa		6.68	□□□□□ -1.34
PVT1-223	ENST00000615442	PANO1	I0J062	215 aa		6.68	□□□□□ -1.34
PVT1-223	ENST00000615442	CHTF8	P0CG12	524 aa		6.68	□□□□□ -1.34
PVT1-223	ENST00000615442	RPL18A	Q02543	176 aa	Known RBP	6.68	□□□□□ -1.34
PVT1-223	ENST00000615442	MAJIN	Q3KP22	176 aa		6.68	□□□□□ -1.34
PVT1-223	ENST00000615442	SCX	Q7RTU7	201 aa		6.68	□□□□□ -1.34
PVT1-223	ENST00000615442	CIRBP-AS1	Q8TBR5	109 aa		6.68	□□□□□ -1.34
PVT1-223	ENST00000615442	MYMX	A0A1B0GTQ4	84 aa		6.67	□□□□□ -1.34
PVT1-223	ENST00000615442		J3QQQ9	107 aa		6.67	□□□□□ -1.34
PVT1-223	ENST00000615442	NMU	P48645	174 aa		6.67	□□□□□ -1.34
PVT1-223	ENST00000615442	HERV-K104	P63124	156 aa		6.67	□□□□□ -1.34
PVT1-223	ENST00000615442	COX17	Q14061	63 aa		6.67	□□□□□ -1.34
PVT1-223	ENST00000615442	STPG4	Q8N801	248 aa		6.67	□□□□□ -1.34
PVT1-223	ENST00000615442	PLAC8	Q9NZF1	115 aa		6.67	□□□□□ -1.34
PVT1-223	ENST00000615442	NDUFA12	Q9UI09	145 aa		6.67	□□□□□ -1.34
PVT1-223	ENST00000615442	BIRC6	Q9NR09	4857 aa		6.67	□□□□□ -1.34
PVT1-223	ENST00000615442		A0A087WYN8	130 aa		6.66	□□□□□ -1.34
PVT1-223	ENST00000615442	LOC105371267	A0A1B0GV96	52 aa		6.66	□□□□□ -1.34
PVT1-223	ENST00000615442	LINC00587	B1AMM8	73 aa		6.66	□□□□□ -1.34
PVT1-223	ENST00000615442	LGALS3	P17931	250 aa	Known RBP	6.66	□□□□□ -1.34
PVT1-223	ENST00000615442	GAGE2E	Q4V326	116 aa		6.66	□□□□□ -1.34
PVT1-223	ENST00000615442	GAGE2D	Q9UEU5	116 aa		6.66	□□□□□ -1.34
PVT1-223	ENST00000615442	ERG28	Q9UKR5	140 aa		6.66	□□□□□ -1.34
PVT1-223	ENST00000615442	TMA7	Q9Y2S6	64 aa	Known RBP	6.66	□□□□□ -1.34
PVT1-223	ENST00000615442	DYNC1H1	Q14204	4646 aa	Known RBP	6.65	□□□□□ -1.34
PVT1-223	ENST00000615442	EPM2A	B3EWF7	344 aa		6.65	□□□□□ -1.34
PVT1-223	ENST00000615442	TSPEAR-AS2	P59090	65 aa		6.65	□□□□□ -1.34
PVT1-223	ENST00000615442	DNAH5	Q8TE73	4624 aa		6.65	□□□□□ -1.34
PVT1-223	ENST00000615442	PKHD1	P08F94	4074 aa		6.65	□□□□□ -1.35
PVT1-223	ENST00000615442	SCGB1D1	O95968	90 aa		6.64	□□□□□ -1.35
PVT1-223	ENST00000615442	PFN2	P35080	140 aa		6.64	□□□□□ -1.35
PVT1-223	ENST00000615442	CTAG1A	P78358	180 aa		6.64	□□□□□ -1.35
PVT1-223	ENST00000615442	HAMP	P81172	84 aa		6.64	□□□□□ -1.35
PVT1-223	ENST00000615442	ATOH7	Q8N100	152 aa		6.64	□□□□□ -1.35
PVT1-223	ENST00000615442	C9orf129	Q5T035	196 aa	Known RBP	6.63	□□□□□ -1.35
PVT1-223	ENST00000615442	IGKV2D-26	A0A0A0MRZ7	120 aa		6.62	□□□□□ -1.35
PVT1-223	ENST00000615442		A0A1W2PNN7	141 aa		6.62	□□□□□ -1.35
PVT1-223	ENST00000615442	HSBP1L1	C9JCN9	74 aa		6.62	□□□□□ -1.35
PVT1-223	ENST00000615442	LINC00158	P58513	81 aa		6.62	□□□□□ -1.35
PVT1-223	ENST00000615442	MEIG1	Q5JSS6	88 aa		6.62	□□□□□ -1.35
PVT1-223	ENST00000615442		Q8N1X5	172 aa		6.62	□□□□□ -1.35
PVT1-223	ENST00000615442	XAGE1A	Q9HD64	81 aa		6.62	□□□□□ -1.35
PVT1-223	ENST00000615442	LRP1B	Q9NZR2	4599 aa		6.62	□□□□□ -1.35
PVT1-223	ENST00000615442	SMR3B	P02814	79 aa	Predicted RBP	6.61	□□□□□ -1.35
PVT1-223	ENST00000615442	SMIM13	P0DJ93	91 aa		6.61	□□□□□ -1.35
PVT1-223	ENST00000615442	JOSD1	Q15040	202 aa	Predicted RBP	6.61	□□□□□ -1.35
PVT1-223	ENST00000615442	ANKRD39	Q53RE8	183 aa		6.61	□□□□□ -1.35
PVT1-223	ENST00000615442	SND1-IT1	Q9HBX3	110 aa		6.61	□□□□□ -1.35
PVT1-223	ENST00000615442	PLA2G2D	Q9UNK4	145 aa		6.61	□□□□□ -1.35
PVT1-223	ENST00000615442		A0A0J9YXY3	114 aa		6.6	□□□□□ -1.35
PVT1-223	ENST00000615442	FAM168B	A1KXE4	195 aa		6.6	□□□□□ -1.35
PVT1-223	ENST00000615442	FAM229A	H3BQW9	127 aa		6.6	□□□□□ -1.35
PVT1-223	ENST00000615442		A0A0U1RRA0	63 aa		6.59	□□□□□ -1.35
PVT1-223	ENST00000615442	ZNF815P	A8K554	130 aa		6.59	□□□□□ -1.35
PVT1-223	ENST00000615442	KRTAP7-1	Q8IUC3	87 aa		6.59	□□□□□ -1.35
PVT1-223	ENST00000615442	LINC00528	Q8N1L1	170 aa		6.59	□□□□□ -1.35
PVT1-223	ENST00000615442	C7orf33	Q8WU49	177 aa		6.59	□□□□□ -1.35
PVT1-223	ENST00000615442	TIMM17B	O60830	172 aa		6.58	□□□□□ -1.36
PVT1-223	ENST00000615442	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	6.58	□□□□□ -1.36
PVT1-223	ENST00000615442	MIR7-3HG	Q8N6C7	128 aa		6.58	□□□□□ -1.36
PVT1-223	ENST00000615442	IGLV5-37	A0A075B6J1	123 aa		6.57	□□□□□ -1.36
PVT1-223	ENST00000615442	LOC107984156	A0A0G2JMH3	177 aa		6.57	□□□□□ -1.36
PVT1-223	ENST00000615442	PLA2G1B	P04054	148 aa	Known RBP	6.57	□□□□□ -1.36
PVT1-223	ENST00000615442	RPL24	P83731	157 aa	Known RBP	6.57	□□□□□ -1.36
PVT1-223	ENST00000615442	LBH	Q53QV2	105 aa	Predicted RBP	6.57	□□□□□ -1.36
PVT1-223	ENST00000615442	SERTAD4-AS1	Q5TG53	156 aa		6.57	□□□□□ -1.36
PVT1-223	ENST00000615442	ARL17A	Q8IVW1	177 aa		6.57	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms