RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SCXQ7RTU7 201 aa8.86□□□□□ -0.99
RNF40-212ENST00000602784 MAP1LC3CQ9BXW4 147 aa8.86□□□□□ -0.99
RNF40-212ENST00000602784 TOMM7Q9P0U1 55 aa8.86□□□□□ -0.99
RNF40-212ENST00000602784 RYR1P21817 5038 aa8.86□□□□□ -0.99
RNF40-212ENST00000602784 TLX1NBP0CAT3 122 aa8.85□□□□□ -0.99
RNF40-212ENST00000602784 TMEM170BQ5T4T1 132 aa8.85□□□□□ -0.99
RNF40-212ENST00000602784 C2orf82Q6UX34 121 aa8.85□□□□□ -0.99
RNF40-212ENST00000602784 CIRBP-AS1Q8TBR5 109 aa8.85□□□□□ -0.99
RNF40-212ENST00000602784 SPACA4Q8TDM5 124 aa8.85□□□□□ -0.99
RNF40-212ENST00000602784 COX7B2Q8TF08 81 aa8.85□□□□□ -0.99
RNF40-212ENST00000602784 C6orf48Q9UBA6 75 aa8.85□□□□□ -0.99
RNF40-212ENST00000602784 DNAH8Q96JB1 4490 aa8.85□□□□□ -0.99
RNF40-212ENST00000602784 HSPG2P98160 4391 aa8.85□□□□□ -0.99
RNF40-212ENST00000602784 A0A096LNI7 61 aa8.84□□□□□ -0.99
RNF40-212ENST00000602784 PANO1I0J062 215 aa8.84□□□□□ -0.99
RNF40-212ENST00000602784 Q8N1X5 172 aa8.84□□□□□ -0.99
RNF40-212ENST00000602784 H0Y8G0 127 aa8.83□□□□□ -1
RNF40-212ENST00000602784 CHTF8P0CG12 524 aa8.83□□□□□ -1
RNF40-212ENST00000602784 PLNP26678 52 aa8.83□□□□□ -1
RNF40-212ENST00000602784 PTTG1IPP53801 180 aa8.83□□□□□ -1
RNF40-212ENST00000602784 HAMPP81172 84 aa8.83□□□□□ -1
RNF40-212ENST00000602784 DPH3Q96FX2 82 aa8.83□□□□□ -1
RNF40-212ENST00000602784 HERC2O95714 4834 aa8.83□□□□□ -1
RNF40-212ENST00000602784 IGKV2-24A0A0C4DH68 120 aa8.82□□□□□ -1
RNF40-212ENST00000602784 PLAC8Q9NZF1 115 aa8.82□□□□□ -1
RNF40-212ENST00000602784 A0A087WYN8 130 aa8.81□□□□□ -1
RNF40-212ENST00000602784 TMEM223A0PJW6 202 aa8.81□□□□□ -1
RNF40-212ENST00000602784 SYS1-DBNDD2H3BUS1 97 aa8.81□□□□□ -1
RNF40-212ENST00000602784 MAJINQ3KP22 176 aa8.81□□□□□ -1
RNF40-212ENST00000602784 NDUFC2-KCTD14E9PQ53 114 aa8.8□□□□□ -1
RNF40-212ENST00000602784 DPM2O94777 84 aa8.8□□□□□ -1
RNF40-212ENST00000602784 GAGE2BQ13066 116 aa8.8□□□□□ -1
RNF40-212ENST00000602784 SFTA2Q6UW10 78 aa8.8□□□□□ -1
RNF40-212ENST00000602784 EPM2AB3EWF7 344 aa8.79□□□□□ -1
RNF40-212ENST00000602784 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
RNF40-212ENST00000602784 RPL18AQ02543 176 aaKnown RBP8.79□□□□□ -1
RNF40-212ENST00000602784 PET117Q6UWS5 81 aa8.79□□□□□ -1
RNF40-212ENST00000602784 Q6ZRP5 223 aa8.79□□□□□ -1
RNF40-212ENST00000602784 STPG4Q8N801 248 aa8.79□□□□□ -1
RNF40-212ENST00000602784 KRTAP17-1Q9BYP8 105 aa8.79□□□□□ -1
RNF40-212ENST00000602784 FAM229AH3BQW9 127 aa8.78□□□□□ -1
RNF40-212ENST00000602784 IGKCP01834 107 aa8.78□□□□□ -1
RNF40-212ENST00000602784 C9orf116Q5BN46 136 aaPredicted RBP8.78□□□□□ -1
RNF40-212ENST00000602784 S100A6P06703 90 aa8.77□□□□□ -1.01
RNF40-212ENST00000602784 LINC01545Q5VT33 79 aa8.77□□□□□ -1.01
RNF40-212ENST00000602784 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
RNF40-212ENST00000602784 LINC00528Q8N1L1 170 aa8.76□□□□□ -1.01
RNF40-212ENST00000602784 HIST3H2BBQ8N257 126 aa8.76□□□□□ -1.01
RNF40-212ENST00000602784 ZNF625Q96I27 306 aaPredicted RBP8.76□□□□□ -1.01
RNF40-212ENST00000602784 PMCHL2Q9BQD1 86 aa8.76□□□□□ -1.01
RNF40-212ENST00000602784 GAGE2EQ4V326 116 aa8.75□□□□□ -1.01
RNF40-212ENST00000602784 GAGE2DQ9UEU5 116 aa8.75□□□□□ -1.01
RNF40-212ENST00000602784 KRTDAPP60985 99 aa8.74□□□□□ -1.01
RNF40-212ENST00000602784 HERVK_113P61574 105 aa8.74□□□□□ -1.01
RNF40-212ENST00000602784 COX17Q14061 63 aa8.74□□□□□ -1.01
RNF40-212ENST00000602784 Q5VSD8 79 aa8.74□□□□□ -1.01
RNF40-212ENST00000602784 A0A1W2PNN7 141 aa8.73□□□□□ -1.01
RNF40-212ENST00000602784 LEPROTO15243 131 aa8.73□□□□□ -1.01
RNF40-212ENST00000602784 PLA2G1BP04054 148 aaKnown RBP8.73□□□□□ -1.01
RNF40-212ENST00000602784 S100A2P29034 98 aa8.73□□□□□ -1.01
RNF40-212ENST00000602784 PLEKHB2Q96CS7 222 aa8.73□□□□□ -1.01
RNF40-212ENST00000602784 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
RNF40-212ENST00000602784 SRRM2Q9UQ35 2752 aaKnown RBP8.73□□□□□ -1.01
RNF40-212ENST00000602784 AKR1D1P51857 326 aa8.72□□□□□ -1.01
RNF40-212ENST00000602784 KRTAP4-5Q9BYR2 181 aa8.72□□□□□ -1.01
RNF40-212ENST00000602784 C20orf202A1L168 122 aa8.71□□□□□ -1.02
RNF40-212ENST00000602784 HERV-K104P63124 156 aa8.71□□□□□ -1.02
RNF40-212ENST00000602784 C9orf129Q5T035 196 aaKnown RBP8.71□□□□□ -1.02
RNF40-212ENST00000602784 C7orf33Q8WU49 177 aa8.71□□□□□ -1.02
RNF40-212ENST00000602784 ERG28Q9UKR5 140 aa8.71□□□□□ -1.02
RNF40-212ENST00000602784 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
RNF40-212ENST00000602784 C5orf52A6NGY3 159 aa8.7□□□□□ -1.02
RNF40-212ENST00000602784 E9PLD3 99 aa8.7□□□□□ -1.02
RNF40-212ENST00000602784 J3QQQ9 107 aa8.7□□□□□ -1.02
RNF40-212ENST00000602784 SNRPEP62304 92 aaKnown RBP8.7□□□□□ -1.02
RNF40-212ENST00000602784 NDUFA12Q9UI09 145 aa8.7□□□□□ -1.02
RNF40-212ENST00000602784 LINC00587B1AMM8 73 aa8.69□□□□□ -1.02
RNF40-212ENST00000602784 PFN2P35080 140 aa8.69□□□□□ -1.02
RNF40-212ENST00000602784 NMUP48645 174 aa8.69□□□□□ -1.02
RNF40-212ENST00000602784 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
RNF40-212ENST00000602784 FAT1Q14517 4588 aa8.69□□□□□ -1.02
RNF40-212ENST00000602784 FAM168BA1KXE4 195 aa8.68□□□□□ -1.02
RNF40-212ENST00000602784 TSPEAR-AS2P59090 65 aa8.68□□□□□ -1.02
RNF40-212ENST00000602784 RPL37AP61513 92 aaKnown RBP8.68□□□□□ -1.02
RNF40-212ENST00000602784 LGALS3P17931 250 aaKnown RBP8.67□□□□□ -1.02
RNF40-212ENST00000602784 KRTAP10-4P60372 401 aaPredicted RBP8.67□□□□□ -1.02
RNF40-212ENST00000602784 VPS13BQ7Z7G8 4022 aa8.67□□□□□ -1.02
RNF40-212ENST00000602784 KRTAP7-1Q8IUC3 87 aa8.67□□□□□ -1.02
RNF40-212ENST00000602784 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
RNF40-212ENST00000602784 FAM19A5Q7Z5A7 132 aaPredicted RBP8.66□□□□□ -1.02
RNF40-212ENST00000602784 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
RNF40-212ENST00000602784 LINC00158P58513 81 aa8.65□□□□□ -1.02
RNF40-212ENST00000602784 TP73-AS1Q9UF72 201 aa8.65□□□□□ -1.02
RNF40-212ENST00000602784 M0QXV9 152 aa8.64□□□□□ -1.03
RNF40-212ENST00000602784 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
RNF40-212ENST00000602784 PHF5AQ7RTV0 110 aaKnown RBP8.64□□□□□ -1.03
RNF40-212ENST00000602784 IGLV5-37A0A075B6J1 123 aa8.63□□□□□ -1.03
RNF40-212ENST00000602784 SMIM13P0DJ93 91 aa8.63□□□□□ -1.03
RNF40-212ENST00000602784 MEIG1Q5JSS6 88 aa8.63□□□□□ -1.03
RNF40-212ENST00000602784 INAFM2P0DMQ5 153 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms