RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 IGHV1-58A0A0C4DH39 117 aa7.25□□□□□ -1.25
HIF3A-217ENST00000600236 IGKV2-24A0A0C4DH68 120 aa7.25□□□□□ -1.25
HIF3A-217ENST00000600236 DPM2O94777 84 aa7.25□□□□□ -1.25
HIF3A-217ENST00000600236 NPSP0C0P6 89 aa7.25□□□□□ -1.25
HIF3A-217ENST00000600236 XCL1P47992 114 aa7.25□□□□□ -1.25
HIF3A-217ENST00000600236 SMAGPQ0VAQ4 97 aa7.25□□□□□ -1.25
HIF3A-217ENST00000600236 FOXI1Q12951 378 aa7.25□□□□□ -1.25
HIF3A-217ENST00000600236 Q6ZN92 141 aa7.25□□□□□ -1.25
HIF3A-217ENST00000600236 LINC00474Q9P2X8 69 aa7.25□□□□□ -1.25
HIF3A-217ENST00000600236 LINC00959A0A1B0GUT2 108 aa7.24□□□□□ -1.25
HIF3A-217ENST00000600236 F8VRH5 84 aa7.24□□□□□ -1.25
HIF3A-217ENST00000600236 CCL25O15444 150 aa7.24□□□□□ -1.25
HIF3A-217ENST00000600236 IGKCP01834 107 aa7.24□□□□□ -1.25
HIF3A-217ENST00000600236 PLNP26678 52 aa7.24□□□□□ -1.25
HIF3A-217ENST00000600236 ZNF561-AS1K7EIQ3 104 aa7.23□□□□□ -1.25
HIF3A-217ENST00000600236 COX8AP10176 69 aa7.23□□□□□ -1.25
HIF3A-217ENST00000600236 LBHQ53QV2 105 aaPredicted RBP7.23□□□□□ -1.25
HIF3A-217ENST00000600236 STPG4Q8N801 248 aa7.23□□□□□ -1.25
HIF3A-217ENST00000600236 CARD19Q96LW7 228 aa7.23□□□□□ -1.25
HIF3A-217ENST00000600236 MRPL35Q9NZE8 188 aaKnown RBP7.23□□□□□ -1.25
HIF3A-217ENST00000600236 PYGO1Q9Y3Y4 419 aa7.23□□□□□ -1.25
HIF3A-217ENST00000600236 DLEU1O43261 78 aa7.22□□□□□ -1.25
HIF3A-217ENST00000600236 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
HIF3A-217ENST00000600236 SLC25A34Q6PIV7 304 aa7.22□□□□□ -1.25
HIF3A-217ENST00000600236 CD164L2Q6UWJ8 174 aa7.22□□□□□ -1.25
HIF3A-217ENST00000600236 CDC42SE2Q9NRR3 84 aa7.22□□□□□ -1.25
HIF3A-217ENST00000600236 MALP21145 153 aa7.21□□□□□ -1.26
HIF3A-217ENST00000600236 RPL39P62891 51 aaKnown RBP7.21□□□□□ -1.26
HIF3A-217ENST00000600236 CTAG1AP78358 180 aa7.21□□□□□ -1.26
HIF3A-217ENST00000600236 PMVKQ15126 192 aa7.21□□□□□ -1.26
HIF3A-217ENST00000600236 PAPPA-AS1Q5QFB9 102 aa7.21□□□□□ -1.26
HIF3A-217ENST00000600236 SPANXA1Q9NS26 97 aa7.21□□□□□ -1.26
HIF3A-217ENST00000600236 CHTOPQ9Y3Y2 248 aaKnown RBP7.21□□□□□ -1.26
HIF3A-217ENST00000600236 A0A096LNI7 61 aa7.2□□□□□ -1.26
HIF3A-217ENST00000600236 M0R143 59 aa7.2□□□□□ -1.26
HIF3A-217ENST00000600236 SYCNQ0VAF6 134 aa7.2□□□□□ -1.26
HIF3A-217ENST00000600236 TIMM21Q9BVV7 248 aa7.2□□□□□ -1.26
HIF3A-217ENST00000600236 CST9LQ9H4G1 147 aa7.2□□□□□ -1.26
HIF3A-217ENST00000600236 LRP1Q07954 4544 aaKnown RBP7.2□□□□□ -1.26
HIF3A-217ENST00000600236 IGLV4-69A0A075B6H9 119 aa7.19□□□□□ -1.26
HIF3A-217ENST00000600236 PRR3P79522 188 aaKnown RBP7.19□□□□□ -1.26
HIF3A-217ENST00000600236 BOD1L2Q8IYS8 172 aa7.19□□□□□ -1.26
HIF3A-217ENST00000600236 C2orf88Q9BSF0 95 aa7.19□□□□□ -1.26
HIF3A-217ENST00000600236 SNHG12Q9BXW3 62 aa7.19□□□□□ -1.26
HIF3A-217ENST00000600236 CSDC2Q9Y534 153 aaKnown RBP7.19□□□□□ -1.26
HIF3A-217ENST00000600236 IGLV4-3A0A075B6K6 122 aa7.18□□□□□ -1.26
HIF3A-217ENST00000600236 COX7A2LO14548 114 aa7.18□□□□□ -1.26
HIF3A-217ENST00000600236 MT1HL1P0DM35 61 aa7.18□□□□□ -1.26
HIF3A-217ENST00000600236 ZC2HC1BQ5TFG8 222 aa7.18□□□□□ -1.26
HIF3A-217ENST00000600236 LINC00526Q96FQ7 95 aa7.18□□□□□ -1.26
HIF3A-217ENST00000600236 AMELXQ99217 191 aa7.18□□□□□ -1.26
HIF3A-217ENST00000600236 APOMO95445 188 aa7.17□□□□□ -1.26
HIF3A-217ENST00000600236 MRPS36P82909 103 aaKnown RBP7.17□□□□□ -1.26
HIF3A-217ENST00000600236 C2orf91Q6ZV80 131 aa7.17□□□□□ -1.26
HIF3A-217ENST00000600236 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
HIF3A-217ENST00000600236 UBE2D4Q9Y2X8 147 aa7.17□□□□□ -1.26
HIF3A-217ENST00000600236 FAT3Q8TDW7 4589 aa7.17□□□□□ -1.26
HIF3A-217ENST00000600236 IGKV2D-26A0A0A0MRZ7 120 aa7.16□□□□□ -1.26
HIF3A-217ENST00000600236 TRAV13-1A0A0B4J241 112 aa7.16□□□□□ -1.26
HIF3A-217ENST00000600236 LOC107984640A0A0U1RRK4 108 aa7.16□□□□□ -1.26
HIF3A-217ENST00000600236 C11orf86A6NJI1 115 aa7.16□□□□□ -1.26
HIF3A-217ENST00000600236 E9PLD3 99 aa7.16□□□□□ -1.26
HIF3A-217ENST00000600236 GAGE2BQ13066 116 aa7.16□□□□□ -1.26
HIF3A-217ENST00000600236 REG3GQ6UW15 175 aa7.16□□□□□ -1.26
HIF3A-217ENST00000600236 SPINK6Q6UWN8 80 aa7.16□□□□□ -1.26
HIF3A-217ENST00000600236 Q6ZRP5 223 aa7.16□□□□□ -1.26
HIF3A-217ENST00000600236 CAMK2N2Q96S95 79 aa7.16□□□□□ -1.26
HIF3A-217ENST00000600236 PTTG1IPP53801 180 aa7.15□□□□□ -1.26
HIF3A-217ENST00000600236 C2orf48Q96LS8 159 aa7.15□□□□□ -1.26
HIF3A-217ENST00000600236 LINC01600Q96MT4 127 aa7.15□□□□□ -1.26
HIF3A-217ENST00000600236 VCX2Q9H322 139 aa7.15□□□□□ -1.26
HIF3A-217ENST00000600236 HIGD1BQ9P298 99 aa7.15□□□□□ -1.26
HIF3A-217ENST00000600236 HMCN2Q8NDA2 5059 aa7.14□□□□□ -1.27
HIF3A-217ENST00000600236 NMUP48645 174 aa7.14□□□□□ -1.27
HIF3A-217ENST00000600236 RNASE13Q5GAN3 156 aaKnown RBP7.14□□□□□ -1.27
HIF3A-217ENST00000600236 PCP2Q8IVA1 136 aa7.14□□□□□ -1.27
HIF3A-217ENST00000600236 TP73-AS1Q9UF72 201 aa7.14□□□□□ -1.27
HIF3A-217ENST00000600236 HERVK_113P61574 105 aa7.13□□□□□ -1.27
HIF3A-217ENST00000600236 SPAG11BQ08648 103 aa7.13□□□□□ -1.27
HIF3A-217ENST00000600236 Q6ZUT4 128 aa7.13□□□□□ -1.27
HIF3A-217ENST00000600236 C5orf38Q86SI9 138 aa7.13□□□□□ -1.27
HIF3A-217ENST00000600236 OPRPNQ99935 248 aaPredicted RBP7.13□□□□□ -1.27
HIF3A-217ENST00000600236 RPL18AQ02543 176 aaKnown RBP7.12□□□□□ -1.27
HIF3A-217ENST00000600236 FAM19A3Q7Z5A8 133 aa7.12□□□□□ -1.27
HIF3A-217ENST00000600236 A0A0J9YXV3 536 aa7.11□□□□□ -1.27
HIF3A-217ENST00000600236 TINCRA0A1B0GVN0 87 aa7.11□□□□□ -1.27
HIF3A-217ENST00000600236 F8WDY8 70 aa7.11□□□□□ -1.27
HIF3A-217ENST00000600236 ZNF22P17026 224 aaPredicted RBP7.11□□□□□ -1.27
HIF3A-217ENST00000600236 HSD52Q0P140 79 aa7.11□□□□□ -1.27
HIF3A-217ENST00000600236 COL5A1-AS1Q5SY13 56 aa7.11□□□□□ -1.27
HIF3A-217ENST00000600236 IGLV5-45A0A087WSX0 123 aa7.1□□□□□ -1.27
HIF3A-217ENST00000600236 TMEM223A0PJW6 202 aa7.1□□□□□ -1.27
HIF3A-217ENST00000600236 UBE2D1P51668 147 aa7.1□□□□□ -1.27
HIF3A-217ENST00000600236 RNF151Q2KHN1 245 aa7.1□□□□□ -1.27
HIF3A-217ENST00000600236 BVES-AS1Q5T3Y7 98 aa7.1□□□□□ -1.27
HIF3A-217ENST00000600236 PKHD1L1Q86WI1 4243 aa7.1□□□□□ -1.27
HIF3A-217ENST00000600236 MYMXA0A1B0GTQ4 84 aa7.09□□□□□ -1.27
HIF3A-217ENST00000600236 NDUFA1O15239 70 aa7.09□□□□□ -1.27
HIF3A-217ENST00000600236 HINT1P49773 126 aaPredicted RBP7.09□□□□□ -1.27
HIF3A-217ENST00000600236 C9orf116Q5BN46 136 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms