RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 CD164L2Q6UWJ8 174 aa6.68□□□□□ -1.34
VRK3-214ENST00000598553 KIR2DL4Q99706 377 aa6.68□□□□□ -1.34
VRK3-214ENST00000598553 CSDC2Q9Y534 153 aaKnown RBP6.68□□□□□ -1.34
VRK3-214ENST00000598553 HMCN2Q8NDA2 5059 aa6.67□□□□□ -1.34
VRK3-214ENST00000598553 TNFRSF6BO95407 300 aa6.67□□□□□ -1.34
VRK3-214ENST00000598553 RPL32P62910 135 aaKnown RBP6.67□□□□□ -1.34
VRK3-214ENST00000598553 BATFQ16520 125 aa6.67□□□□□ -1.34
VRK3-214ENST00000598553 LINC00173Q6ZV60 143 aa6.67□□□□□ -1.34
VRK3-214ENST00000598553 CARD19Q96LW7 228 aa6.67□□□□□ -1.34
VRK3-214ENST00000598553 C20orf78Q9BR46 151 aa6.67□□□□□ -1.34
VRK3-214ENST00000598553 IGLV4-69A0A075B6H9 119 aa6.66□□□□□ -1.34
VRK3-214ENST00000598553 TRAV13-1A0A0B4J241 112 aa6.66□□□□□ -1.34
VRK3-214ENST00000598553 Q6ZRU5 148 aa6.66□□□□□ -1.34
VRK3-214ENST00000598553 C5orf38Q86SI9 138 aa6.66□□□□□ -1.34
VRK3-214ENST00000598553 STPG4Q8N801 248 aa6.66□□□□□ -1.34
VRK3-214ENST00000598553 Q8N8P6 123 aa6.66□□□□□ -1.34
VRK3-214ENST00000598553 IFI27L1Q96BM0 104 aa6.66□□□□□ -1.34
VRK3-214ENST00000598553 TIMM21Q9BVV7 248 aa6.66□□□□□ -1.34
VRK3-214ENST00000598553 PKIGQ9Y2B9 76 aa6.66□□□□□ -1.34
VRK3-214ENST00000598553 ZNF561-AS1K7EIQ3 104 aa6.65□□□□□ -1.34
VRK3-214ENST00000598553 K7EMI3 77 aa6.65□□□□□ -1.34
VRK3-214ENST00000598553 ATP5LO75964 103 aa6.65□□□□□ -1.34
VRK3-214ENST00000598553 PRR3P79522 188 aaKnown RBP6.65□□□□□ -1.34
VRK3-214ENST00000598553 C7orf33Q8WU49 177 aa6.65□□□□□ -1.34
VRK3-214ENST00000598553 SMIM2Q9BVW6 85 aa6.65□□□□□ -1.34
VRK3-214ENST00000598553 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.34
VRK3-214ENST00000598553 A0A096LNJ9 63 aa6.64□□□□□ -1.35
VRK3-214ENST00000598553 A0A0J9YXV3 536 aa6.64□□□□□ -1.35
VRK3-214ENST00000598553 H0Y8G0 127 aa6.64□□□□□ -1.35
VRK3-214ENST00000598553 COX7A2LO14548 114 aa6.64□□□□□ -1.35
VRK3-214ENST00000598553 COX8AP10176 69 aa6.64□□□□□ -1.35
VRK3-214ENST00000598553 SYCNQ0VAF6 134 aa6.64□□□□□ -1.35
VRK3-214ENST00000598553 SERTAD4-AS1Q5TG53 156 aa6.64□□□□□ -1.35
VRK3-214ENST00000598553 ORAOV1Q8WV07 137 aa6.64□□□□□ -1.35
VRK3-214ENST00000598553 A0A1W2PNN7 141 aa6.63□□□□□ -1.35
VRK3-214ENST00000598553 LINC01549A6NIU2 74 aa6.63□□□□□ -1.35
VRK3-214ENST00000598553 DLEU1O43261 78 aa6.63□□□□□ -1.35
VRK3-214ENST00000598553 MALP21145 153 aa6.63□□□□□ -1.35
VRK3-214ENST00000598553 G0S2P27469 103 aa6.63□□□□□ -1.35
VRK3-214ENST00000598553 ZC2HC1BQ5TFG8 222 aa6.63□□□□□ -1.35
VRK3-214ENST00000598553 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.62□□□□□ -1.35
VRK3-214ENST00000598553 HINT1P49773 126 aaPredicted RBP6.62□□□□□ -1.35
VRK3-214ENST00000598553 PTTG1IPP53801 180 aa6.62□□□□□ -1.35
VRK3-214ENST00000598553 GAGE2BQ13066 116 aa6.62□□□□□ -1.35
VRK3-214ENST00000598553 ORMDL2Q53FV1 153 aa6.62□□□□□ -1.35
VRK3-214ENST00000598553 SPANXA1Q9NS26 97 aa6.62□□□□□ -1.35
VRK3-214ENST00000598553 TNXBP22105 4242 aa6.61□□□□□ -1.35
VRK3-214ENST00000598553 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
VRK3-214ENST00000598553 C10orf25Q5T742 122 aa6.61□□□□□ -1.35
VRK3-214ENST00000598553 KRTAP11-1Q8IUC1 163 aa6.61□□□□□ -1.35
VRK3-214ENST00000598553 IGHV3OR16-9A0A0B4J2B5 98 aa6.6□□□□□ -1.35
VRK3-214ENST00000598553 APOMO95445 188 aa6.6□□□□□ -1.35
VRK3-214ENST00000598553 SEC11AP67812 179 aa6.6□□□□□ -1.35
VRK3-214ENST00000598553 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
VRK3-214ENST00000598553 SPAG11BQ08648 103 aa6.6□□□□□ -1.35
VRK3-214ENST00000598553 C2orf48Q96LS8 159 aa6.6□□□□□ -1.35
VRK3-214ENST00000598553 CAMK2N2Q96S95 79 aa6.6□□□□□ -1.35
VRK3-214ENST00000598553 DPM2O94777 84 aa6.59□□□□□ -1.35
VRK3-214ENST00000598553 IGKCP01834 107 aa6.59□□□□□ -1.35
VRK3-214ENST00000598553 BVES-AS1Q5T3Y7 98 aa6.59□□□□□ -1.35
VRK3-214ENST00000598553 KRTAP7-1Q8IUC3 87 aa6.59□□□□□ -1.35
VRK3-214ENST00000598553 BOD1L2Q8IYS8 172 aa6.59□□□□□ -1.35
VRK3-214ENST00000598553 PLA2G2DQ9UNK4 145 aa6.59□□□□□ -1.35
VRK3-214ENST00000598553 IGLV4-3A0A075B6K6 122 aa6.58□□□□□ -1.36
VRK3-214ENST00000598553 TRAV12-1A0A0B4J245 112 aa6.58□□□□□ -1.36
VRK3-214ENST00000598553 FAM168BA1KXE4 195 aa6.58□□□□□ -1.36
VRK3-214ENST00000598553 PLNP26678 52 aa6.58□□□□□ -1.36
VRK3-214ENST00000598553 PHF5AQ7RTV0 110 aaKnown RBP6.58□□□□□ -1.36
VRK3-214ENST00000598553 A6NDN8 102 aa6.57□□□□□ -1.36
VRK3-214ENST00000598553 RPL18AQ02543 176 aaKnown RBP6.57□□□□□ -1.36
VRK3-214ENST00000598553 HSD52Q0P140 79 aa6.57□□□□□ -1.36
VRK3-214ENST00000598553 SRSF9Q13242 221 aaKnown RBP eCLIP6.57□□□□□ -1.36
VRK3-214ENST00000598553 ANKRD39Q53RE8 183 aa6.57□□□□□ -1.36
VRK3-214ENST00000598553 C9orf116Q5BN46 136 aaPredicted RBP6.57□□□□□ -1.36
VRK3-214ENST00000598553 LINC00242Q5T6M2 205 aa6.57□□□□□ -1.36
VRK3-214ENST00000598553 TOMM6Q96B49 74 aa6.57□□□□□ -1.36
VRK3-214ENST00000598553 HIGD1BQ9P298 99 aa6.57□□□□□ -1.36
VRK3-214ENST00000598553 C6orf48Q9UBA6 75 aa6.57□□□□□ -1.36
VRK3-214ENST00000598553 PYGO1Q9Y3Y4 419 aa6.57□□□□□ -1.36
VRK3-214ENST00000598553 F8WDY8 70 aa6.56□□□□□ -1.36
VRK3-214ENST00000598553 KIAA0087Q14695 138 aa6.56□□□□□ -1.36
VRK3-214ENST00000598553 RNF151Q2KHN1 245 aa6.56□□□□□ -1.36
VRK3-214ENST00000598553 UNQ6190/PRO20217Q6UXQ8 127 aa6.56□□□□□ -1.36
VRK3-214ENST00000598553 C2orf91Q6ZV80 131 aa6.56□□□□□ -1.36
VRK3-214ENST00000598553 NMUP48645 174 aa6.55□□□□□ -1.36
VRK3-214ENST00000598553 UBE2V1Q13404 147 aa6.55□□□□□ -1.36
VRK3-214ENST00000598553 C2orf82Q6UX34 121 aa6.55□□□□□ -1.36
VRK3-214ENST00000598553 Q6ZRP5 223 aa6.55□□□□□ -1.36
VRK3-214ENST00000598553 TMEM141Q96I45 108 aa6.55□□□□□ -1.36
VRK3-214ENST00000598553 LINC01600Q96MT4 127 aa6.55□□□□□ -1.36
VRK3-214ENST00000598553 SCGB3A1Q96QR1 104 aa6.55□□□□□ -1.36
VRK3-214ENST00000598553 MRPL35Q9NZE8 188 aaKnown RBP6.55□□□□□ -1.36
VRK3-214ENST00000598553 F8VRH5 84 aa6.54□□□□□ -1.36
VRK3-214ENST00000598553 NDUFA1O15239 70 aa6.54□□□□□ -1.36
VRK3-214ENST00000598553 UBE2D1P51668 147 aa6.54□□□□□ -1.36
VRK3-214ENST00000598553 SPINK6Q6UWN8 80 aa6.54□□□□□ -1.36
VRK3-214ENST00000598553 PSORS1C2Q9UIG4 136 aa6.54□□□□□ -1.36
VRK3-214ENST00000598553 A0A087WZ39 114 aa6.53□□□□□ -1.36
VRK3-214ENST00000598553 H3BRM9 83 aa6.53□□□□□ -1.36
VRK3-214ENST00000598553 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms