RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 HSPB8Q9UJY1 196 aa8.1□□□□□ -1.11
CDK5RAP3-203ENST00000577442 CHTOPQ9Y3Y2 248 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-203ENST00000577442 A0A087WYN8 130 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST1H2BKO60814 126 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST1H2BJP06899 126 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST1H2BOP23527 126 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST1H2BBP33778 126 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 PTTG1IPP53801 180 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST1H2BDP58876 126 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST1H2BCP62807 126 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 GAGE2BQ13066 116 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST2H2BEQ16778 126 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 UNQ6190/PRO20217Q6UXQ8 127 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST1H2BHQ93079 126 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST1H2BNQ99877 126 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 HIST1H2BMQ99879 126 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 C6orf48Q9UBA6 75 aa8.09□□□□□ -1.11
CDK5RAP3-203ENST00000577442 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
CDK5RAP3-203ENST00000577442 SPINK8P0C7L1 97 aa8.08□□□□□ -1.12
CDK5RAP3-203ENST00000577442 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
CDK5RAP3-203ENST00000577442 ZNF22P17026 224 aaPredicted RBP8.08□□□□□ -1.12
CDK5RAP3-203ENST00000577442 C10orf25Q5T742 122 aa8.08□□□□□ -1.12
CDK5RAP3-203ENST00000577442 C2orf82Q6UX34 121 aa8.08□□□□□ -1.12
CDK5RAP3-203ENST00000577442 COX7B2Q8TF08 81 aa8.08□□□□□ -1.12
CDK5RAP3-203ENST00000577442 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
CDK5RAP3-203ENST00000577442 SRRM2Q9UQ35 2752 aaKnown RBP8.08□□□□□ -1.12
CDK5RAP3-203ENST00000577442 ABCA13Q86UQ4 5058 aa8.07□□□□□ -1.12
CDK5RAP3-203ENST00000577442 C11orf86A6NJI1 115 aa8.07□□□□□ -1.12
CDK5RAP3-203ENST00000577442 F8VRH5 84 aa8.07□□□□□ -1.12
CDK5RAP3-203ENST00000577442 STPG4Q8N801 248 aa8.07□□□□□ -1.12
CDK5RAP3-203ENST00000577442 FLG2Q5D862 2391 aaPredicted RBP8.06□□□□□ -1.12
CDK5RAP3-203ENST00000577442 IGLV5-39A0A0G2JS06 123 aa8.06□□□□□ -1.12
CDK5RAP3-203ENST00000577442 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
CDK5RAP3-203ENST00000577442 KRTAP17-1Q9BYP8 105 aa8.06□□□□□ -1.12
CDK5RAP3-203ENST00000577442 NDUFC2-KCTD14E9PQ53 114 aa8.05□□□□□ -1.12
CDK5RAP3-203ENST00000577442 NUPR1O60356 82 aa8.05□□□□□ -1.12
CDK5RAP3-203ENST00000577442 FABP4P15090 132 aa8.05□□□□□ -1.12
CDK5RAP3-203ENST00000577442 C7orf33Q8WU49 177 aa8.05□□□□□ -1.12
CDK5RAP3-203ENST00000577442 KRTAP4-5Q9BYR2 181 aa8.05□□□□□ -1.12
CDK5RAP3-203ENST00000577442 H0Y8G0 127 aa8.04□□□□□ -1.12
CDK5RAP3-203ENST00000577442 RPL37AP61513 92 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-203ENST00000577442 ODF1Q14990 250 aa8.03□□□□□ -1.12
CDK5RAP3-203ENST00000577442 COA6Q5JTJ3 125 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-203ENST00000577442 SFTA2Q6UW10 78 aa8.03□□□□□ -1.12
CDK5RAP3-203ENST00000577442 Q6ZRP5 223 aa8.03□□□□□ -1.12
CDK5RAP3-203ENST00000577442 MAP1LC3CQ9BXW4 147 aa8.03□□□□□ -1.12
CDK5RAP3-203ENST00000577442 PCLOQ9Y6V0 5065 aa8.03□□□□□ -1.12
CDK5RAP3-203ENST00000577442 PLNP26678 52 aa8.02□□□□□ -1.13
CDK5RAP3-203ENST00000577442 GAGE2EQ4V326 116 aa8.02□□□□□ -1.13
CDK5RAP3-203ENST00000577442 GAGE2DQ9UEU5 116 aa8.02□□□□□ -1.13
CDK5RAP3-203ENST00000577442 C9orf116Q5BN46 136 aaPredicted RBP8.01□□□□□ -1.13
CDK5RAP3-203ENST00000577442 TMEM223A0PJW6 202 aa8□□□□□ -1.13
CDK5RAP3-203ENST00000577442 DPM2O94777 84 aa8□□□□□ -1.13
CDK5RAP3-203ENST00000577442 INAFM2P0DMQ5 153 aa8□□□□□ -1.13
CDK5RAP3-203ENST00000577442 HERVK_113P61574 105 aa7.99□□□□□ -1.13
CDK5RAP3-203ENST00000577442 DMBT1Q9UGM3 2413 aaPredicted RBP7.98□□□□□ -1.13
CDK5RAP3-203ENST00000577442 A0A1W2PNN7 141 aa7.98□□□□□ -1.13
CDK5RAP3-203ENST00000577442 SYS1-DBNDD2H3BUS1 97 aa7.97□□□□□ -1.13
CDK5RAP3-203ENST00000577442 IGKCP01834 107 aa7.97□□□□□ -1.13
CDK5RAP3-203ENST00000577442 PKHD1L1Q86WI1 4243 aa7.96□□□□□ -1.14
CDK5RAP3-203ENST00000577442 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.14
CDK5RAP3-203ENST00000577442 PET117Q6UWS5 81 aa7.96□□□□□ -1.14
CDK5RAP3-203ENST00000577442 FAM19A5Q7Z5A7 132 aaPredicted RBP7.96□□□□□ -1.14
CDK5RAP3-203ENST00000577442 PLEKHB2Q96CS7 222 aa7.96□□□□□ -1.14
CDK5RAP3-203ENST00000577442 KRTAP10-4P60372 401 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-203ENST00000577442 COX17Q14061 63 aa7.95□□□□□ -1.14
CDK5RAP3-203ENST00000577442 ZNF625Q96I27 306 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-203ENST00000577442 PMCHL2Q9BQD1 86 aa7.95□□□□□ -1.14
CDK5RAP3-203ENST00000577442 XAGE1AQ9HD64 81 aa7.95□□□□□ -1.14
CDK5RAP3-203ENST00000577442 ERG28Q9UKR5 140 aa7.95□□□□□ -1.14
CDK5RAP3-203ENST00000577442 FAM168BA1KXE4 195 aa7.94□□□□□ -1.14
CDK5RAP3-203ENST00000577442 M0QXV9 152 aa7.94□□□□□ -1.14
CDK5RAP3-203ENST00000577442 PFN2P35080 140 aa7.94□□□□□ -1.14
CDK5RAP3-203ENST00000577442 PRR3P79522 188 aaKnown RBP7.94□□□□□ -1.14
CDK5RAP3-203ENST00000577442 MYCBP2O75592 4640 aa7.94□□□□□ -1.14
CDK5RAP3-203ENST00000577442 C20orf202A1L168 122 aa7.93□□□□□ -1.14
CDK5RAP3-203ENST00000577442 LEPROTO15243 131 aa7.93□□□□□ -1.14
CDK5RAP3-203ENST00000577442 HERV-K104P63124 156 aa7.93□□□□□ -1.14
CDK5RAP3-203ENST00000577442 LINC01545Q5VT33 79 aa7.93□□□□□ -1.14
CDK5RAP3-203ENST00000577442 PHF5AQ7RTV0 110 aaKnown RBP7.93□□□□□ -1.14
CDK5RAP3-203ENST00000577442 NDUFA12Q9UI09 145 aa7.93□□□□□ -1.14
CDK5RAP3-203ENST00000577442 MYMXA0A1B0GTQ4 84 aa7.92□□□□□ -1.14
CDK5RAP3-203ENST00000577442 LINC00587B1AMM8 73 aa7.92□□□□□ -1.14
CDK5RAP3-203ENST00000577442 S100A6P06703 90 aa7.92□□□□□ -1.14
CDK5RAP3-203ENST00000577442 C3orf79P0CE67 100 aa7.92□□□□□ -1.14
CDK5RAP3-203ENST00000577442 NMUP48645 174 aa7.92□□□□□ -1.14
CDK5RAP3-203ENST00000577442 KRTDAPP60985 99 aa7.92□□□□□ -1.14
CDK5RAP3-203ENST00000577442 J3QQQ9 107 aa7.91□□□□□ -1.14
CDK5RAP3-203ENST00000577442 LGALS3P17931 250 aaKnown RBP7.91□□□□□ -1.14
CDK5RAP3-203ENST00000577442 S100A2P29034 98 aa7.91□□□□□ -1.14
CDK5RAP3-203ENST00000577442 AKR1D1P51857 326 aa7.91□□□□□ -1.14
CDK5RAP3-203ENST00000577442 UBE2BP63146 152 aa7.91□□□□□ -1.14
CDK5RAP3-203ENST00000577442 LBHQ53QV2 105 aaPredicted RBP7.91□□□□□ -1.14
CDK5RAP3-203ENST00000577442 TP73-AS1Q9UF72 201 aa7.91□□□□□ -1.14
CDK5RAP3-203ENST00000577442 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
CDK5RAP3-203ENST00000577442 LINC00158P58513 81 aa7.9□□□□□ -1.14
CDK5RAP3-203ENST00000577442 MEIG1Q5JSS6 88 aa7.9□□□□□ -1.14
CDK5RAP3-203ENST00000577442 SERTAD4-AS1Q5TG53 156 aa7.9□□□□□ -1.14
CDK5RAP3-203ENST00000577442 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms