RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 NRACQ8N912 160 aa5.64□□□□□ -1.51
NPLOC4-204ENST00000570324 URB1-AS1Q96HZ7 61 aa5.64□□□□□ -1.51
NPLOC4-204ENST00000570324 CAMK2N2Q96S95 79 aa5.64□□□□□ -1.51
NPLOC4-204ENST00000570324 UBE2D4Q9Y2X8 147 aa5.64□□□□□ -1.51
NPLOC4-204ENST00000570324 CSDC2Q9Y534 153 aaKnown RBP5.64□□□□□ -1.51
NPLOC4-204ENST00000570324 IGLV4-69A0A075B6H9 119 aa5.63□□□□□ -1.51
NPLOC4-204ENST00000570324 LINC01546A6NGU7 62 aa5.63□□□□□ -1.51
NPLOC4-204ENST00000570324 TNFRSF6BO95407 300 aa5.63□□□□□ -1.51
NPLOC4-204ENST00000570324 COX8AP10176 69 aa5.63□□□□□ -1.51
NPLOC4-204ENST00000570324 GAGE2BQ13066 116 aa5.63□□□□□ -1.51
NPLOC4-204ENST00000570324 LOC107984640A0A0U1RRK4 108 aa5.62□□□□□ -1.51
NPLOC4-204ENST00000570324 BATFQ16520 125 aa5.62□□□□□ -1.51
NPLOC4-204ENST00000570324 BVES-AS1Q5T3Y7 98 aa5.62□□□□□ -1.51
NPLOC4-204ENST00000570324 Q6ZUT4 128 aa5.62□□□□□ -1.51
NPLOC4-204ENST00000570324 FA2HQ7L5A8 372 aa5.62□□□□□ -1.51
NPLOC4-204ENST00000570324 C5orf38Q86SI9 138 aa5.62□□□□□ -1.51
NPLOC4-204ENST00000570324 TIMM21Q9BVV7 248 aa5.62□□□□□ -1.51
NPLOC4-204ENST00000570324 A6NDN8 102 aa5.61□□□□□ -1.51
NPLOC4-204ENST00000570324 PRSS47A8MTI9 375 aa5.61□□□□□ -1.51
NPLOC4-204ENST00000570324 D6R8Y8 96 aa5.61□□□□□ -1.51
NPLOC4-204ENST00000570324 HINT1P49773 126 aaPredicted RBP5.61□□□□□ -1.51
NPLOC4-204ENST00000570324 RPL32P62910 135 aaKnown RBP5.61□□□□□ -1.51
NPLOC4-204ENST00000570324 BOD1L2Q8IYS8 172 aa5.61□□□□□ -1.51
NPLOC4-204ENST00000570324 ORMDL3Q8N138 153 aa5.61□□□□□ -1.51
NPLOC4-204ENST00000570324 C2orf48Q96LS8 159 aa5.61□□□□□ -1.51
NPLOC4-204ENST00000570324 SMIM2Q9BVW6 85 aa5.61□□□□□ -1.51
NPLOC4-204ENST00000570324 H3BRM9 83 aa5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 K7ERU9 68 aa5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 IFI27P40305 119 aaPredicted RBP5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 RPL39P62891 51 aaKnown RBP5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 PRR3P79522 188 aaKnown RBP5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 RPL18AQ02543 176 aaKnown RBP5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 SPAG11BQ08648 103 aa5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 ANKRD39Q53RE8 183 aa5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 Q6ZRP5 223 aa5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 GTF2H5Q6ZYL4 71 aa5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 SPANXA1Q9NS26 97 aa5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 HIGD1BQ9P298 99 aa5.6□□□□□ -1.51
NPLOC4-204ENST00000570324 LINC01549A6NIU2 74 aa5.59□□□□□ -1.51
NPLOC4-204ENST00000570324 K7EMI3 77 aa5.59□□□□□ -1.51
NPLOC4-204ENST00000570324 TAX1BP3O14907 124 aa5.59□□□□□ -1.51
NPLOC4-204ENST00000570324 NPYP01303 97 aa5.59□□□□□ -1.51
NPLOC4-204ENST00000570324 HBDP02042 147 aa5.59□□□□□ -1.51
NPLOC4-204ENST00000570324 REG3GQ6UW15 175 aa5.59□□□□□ -1.51
NPLOC4-204ENST00000570324 PRELID3AQ96N28 172 aa5.59□□□□□ -1.51
NPLOC4-204ENST00000570324 NXT2Q9NPJ8 142 aaKnown RBP5.59□□□□□ -1.51
NPLOC4-204ENST00000570324 HSD52Q0P140 79 aa5.58□□□□□ -1.52
NPLOC4-204ENST00000570324 VAMP3Q15836 100 aa5.58□□□□□ -1.52
NPLOC4-204ENST00000570324 SPINK6Q6UWN8 80 aa5.58□□□□□ -1.52
NPLOC4-204ENST00000570324 OPRPNQ99935 248 aaPredicted RBP5.58□□□□□ -1.52
NPLOC4-204ENST00000570324 LOC389332A0A1B0GUA5 103 aa5.57□□□□□ -1.52
NPLOC4-204ENST00000570324 F8WDY8 70 aa5.57□□□□□ -1.52
NPLOC4-204ENST00000570324 NDUFA1O15239 70 aa5.57□□□□□ -1.52
NPLOC4-204ENST00000570324 ATP5LO75964 103 aa5.57□□□□□ -1.52
NPLOC4-204ENST00000570324 MT1HL1P0DM35 61 aa5.57□□□□□ -1.52
NPLOC4-204ENST00000570324 PCP4P48539 62 aa5.57□□□□□ -1.52
NPLOC4-204ENST00000570324 MRPS36P82909 103 aaKnown RBP5.57□□□□□ -1.52
NPLOC4-204ENST00000570324 TAL2Q16559 108 aa5.57□□□□□ -1.52
NPLOC4-204ENST00000570324 RNF151Q2KHN1 245 aa5.57□□□□□ -1.52
NPLOC4-204ENST00000570324 MAP1LC3AQ9H492 121 aa5.57□□□□□ -1.52
NPLOC4-204ENST00000570324 A0A0J9YXV3 536 aa5.56□□□□□ -1.52
NPLOC4-204ENST00000570324 A0A1W2PNN7 141 aa5.56□□□□□ -1.52
NPLOC4-204ENST00000570324 C9orf118A6NHY6 69 aa5.56□□□□□ -1.52
NPLOC4-204ENST00000570324 C9orf116Q5BN46 136 aaPredicted RBP5.56□□□□□ -1.52
NPLOC4-204ENST00000570324 ATOH7Q8N100 152 aa5.56□□□□□ -1.52
NPLOC4-204ENST00000570324 LINC01600Q96MT4 127 aa5.56□□□□□ -1.52
NPLOC4-204ENST00000570324 MRPL35Q9NZE8 188 aaKnown RBP5.56□□□□□ -1.52
NPLOC4-204ENST00000570324 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
NPLOC4-204ENST00000570324 IGHV3OR16-9A0A0B4J2B5 98 aa5.55□□□□□ -1.52
NPLOC4-204ENST00000570324 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.55□□□□□ -1.52
NPLOC4-204ENST00000570324 C2orf91Q6ZV80 131 aa5.55□□□□□ -1.52
NPLOC4-204ENST00000570324 IFI27L1Q96BM0 104 aa5.55□□□□□ -1.52
NPLOC4-204ENST00000570324 TMEM141Q96I45 108 aa5.55□□□□□ -1.52
NPLOC4-204ENST00000570324 CST9LQ9H4G1 147 aa5.55□□□□□ -1.52
NPLOC4-204ENST00000570324 CYSLTR1Q9Y271 337 aa5.55□□□□□ -1.52
NPLOC4-204ENST00000570324 A0A096LNJ9 63 aa5.54□□□□□ -1.52
NPLOC4-204ENST00000570324 GAGE10A6NGK3 116 aa5.54□□□□□ -1.52
NPLOC4-204ENST00000570324 GAGE2EQ4V326 116 aa5.54□□□□□ -1.52
NPLOC4-204ENST00000570324 OCIAD2Q56VL3 154 aa5.54□□□□□ -1.52
NPLOC4-204ENST00000570324 C1orf137Q5JT78 98 aa5.54□□□□□ -1.52
NPLOC4-204ENST00000570324 GAGE2DQ9UEU5 116 aa5.54□□□□□ -1.52
NPLOC4-204ENST00000570324 PYGO1Q9Y3Y4 419 aa5.54□□□□□ -1.52
NPLOC4-204ENST00000570324 IGLV4-3A0A075B6K6 122 aa5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 ORMDL2Q53FV1 153 aa5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 C2orf66Q6UXQ4 117 aa5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 UNQ6190/PRO20217Q6UXQ8 127 aa5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 PHF5AQ7RTV0 110 aaKnown RBP5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 ERASQ7Z444 233 aa5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 Q8N8P6 123 aa5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 FAM104AQ969W3 186 aa5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 VCX2Q9H322 139 aa5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 PSORS1C2Q9UIG4 136 aa5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 FAT3Q8TDW7 4589 aa5.53□□□□□ -1.52
NPLOC4-204ENST00000570324 A0A087WZ39 114 aa5.52□□□□□ -1.53
NPLOC4-204ENST00000570324 TRAV12-1A0A0B4J245 112 aa5.52□□□□□ -1.53
NPLOC4-204ENST00000570324 PRSS2P07478 247 aa5.52□□□□□ -1.53
NPLOC4-204ENST00000570324 SRSF9Q13242 221 aaKnown RBP eCLIP5.52□□□□□ -1.53
NPLOC4-204ENST00000570324 LINC00242Q5T6M2 205 aa5.52□□□□□ -1.53
NPLOC4-204ENST00000570324 LINC00173Q6ZV60 143 aa5.52□□□□□ -1.53
NPLOC4-204ENST00000570324 TRBV30A0A0K0K1B3 111 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms