RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 V9GYV3 84 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 IGKV2D-26A0A0A0MRZ7 120 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 M0QXV9 152 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST1H2BKO60814 126 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST1H2BJP06899 126 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST1H2BOP23527 126 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST1H2BBP33778 126 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 RPL28P46779 137 aaKnown RBP3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 FOXA3P55318 350 aaPredicted RBP3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST1H2BDP58876 126 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST1H2BCP62807 126 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST2H2BEQ16778 126 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 FAM19A5Q7Z5A7 132 aaPredicted RBP3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST1H2BHQ93079 126 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST1H2BNQ99877 126 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 HIST1H2BMQ99879 126 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 KRTAP9-3Q9BYQ3 159 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 TRAPPC1Q9Y5R8 145 aa3.59□□□□□ -1.83
HERPUD1-217ENST00000569429 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 SMIM27A0A1W2PRY6 76 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 UBE2L6O14933 153 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 ESDP10768 282 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 CTRLP40313 264 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 S100A12P80511 92 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 COA6Q5JTJ3 125 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 MRPL54Q6P161 138 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 ATP5L2Q7Z4Y8 100 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 OR5A1Q8NGJ0 315 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 CAMK2N2Q96S95 79 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 GNB1LQ9BYB4 327 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 UBE2D4Q9Y2X8 147 aa3.58□□□□□ -1.84
HERPUD1-217ENST00000569429 KRTAP23-1A1A580 65 aa3.57□□□□□ -1.84
HERPUD1-217ENST00000569429 XCL1P47992 114 aa3.57□□□□□ -1.84
HERPUD1-217ENST00000569429 SUMO4Q6EEV6 95 aa3.57□□□□□ -1.84
HERPUD1-217ENST00000569429 PET117Q6UWS5 81 aa3.57□□□□□ -1.84
HERPUD1-217ENST00000569429 AMN1Q8IY45 258 aa3.57□□□□□ -1.84
HERPUD1-217ENST00000569429 TMEM18Q96B42 140 aa3.57□□□□□ -1.84
HERPUD1-217ENST00000569429 C2orf48Q96LS8 159 aa3.57□□□□□ -1.84
HERPUD1-217ENST00000569429 C12orf57Q99622 126 aa3.57□□□□□ -1.84
HERPUD1-217ENST00000569429 NIT2Q9NQR4 276 aa3.57□□□□□ -1.84
HERPUD1-217ENST00000569429 A0A1B0GW15 77 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 M0QY20 66 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 NPSP0C0P6 89 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 TLX1NBP0CAT3 122 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 RAB4AP20338 218 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 PMCHP20382 165 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 CKS2P33552 79 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 HBBP68871 147 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 HIST3H2BBQ8N257 126 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 TMEM191AQ9H0A3 160 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 ST20Q9HBF5 79 aa3.56□□□□□ -1.84
HERPUD1-217ENST00000569429 A4D1N5 150 aa3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 SMKR1H3BMG3 65 aa3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 CCL25O15444 150 aa3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 NCR2O95944 276 aa3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 APCSP02743 223 aa3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 GATD1Q8NB37 220 aa3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 OR10D4PQ8NGN7 298 aa3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 RPL39LQ96EH5 51 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 MRAP2Q96G30 205 aa3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 PACRGQ96M98 296 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 CNFNQ9BYD5 112 aa3.55□□□□□ -1.84
HERPUD1-217ENST00000569429 LOC389332A0A1B0GUA5 103 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 LINC00959A0A1B0GUT2 108 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 I3L3M4 83 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 PPP1R17O96001 155 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 MT2AP02795 61 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 FABP4P15090 132 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 FCER1GP30273 86 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 COTL1Q14019 142 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 MRPL51Q4U2R6 128 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 FAM104BQ5XKR9 115 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 CD164L2Q6UWJ8 174 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 TMEM136Q6ZRR5 245 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 BAGE3Q86Y29 109 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 HIST1H2BLQ99880 126 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 MRPL35Q9NZE8 188 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 NDUFA12Q9UI09 145 aa3.54□□□□□ -1.84
HERPUD1-217ENST00000569429 SDHAF1A6NFY7 115 aa3.53□□□□□ -1.84
HERPUD1-217ENST00000569429 D6R8Y8 96 aa3.53□□□□□ -1.84
HERPUD1-217ENST00000569429 VCYO14598 125 aa3.53□□□□□ -1.84
HERPUD1-217ENST00000569429 BCE1O60756 84 aa3.53□□□□□ -1.84
HERPUD1-217ENST00000569429 JOSD1Q15040 202 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-217ENST00000569429 KIAA1644Q3SXP7 199 aa3.53□□□□□ -1.84
HERPUD1-217ENST00000569429 PDZD11Q5EBL8 140 aa3.53□□□□□ -1.84
HERPUD1-217ENST00000569429 AMMECR1LQ6DCA0 310 aa3.53□□□□□ -1.84
HERPUD1-217ENST00000569429 RNASEKQ6P5S7 137 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-217ENST00000569429 ORMDL3Q8N138 153 aa3.53□□□□□ -1.84
HERPUD1-217ENST00000569429 A0A1B0GXF2 115 aa3.52□□□□□ -1.85
HERPUD1-217ENST00000569429 TSTD3H0UI37 97 aa3.52□□□□□ -1.85
HERPUD1-217ENST00000569429 PPBPP02775 128 aa3.52□□□□□ -1.85
HERPUD1-217ENST00000569429 C3orf22Q8N5N4 141 aa3.52□□□□□ -1.85
HERPUD1-217ENST00000569429 PRELID3AQ96N28 172 aa3.52□□□□□ -1.85
HERPUD1-217ENST00000569429 PCP4L1A6NKN8 68 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 IFITM10A6NMD0 228 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 H7C423 109 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 TCAPO15273 167 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 NPYP01303 97 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 MT1FP04733 61 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms