RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 IGLV5-39A0A0G2JS06 123 aa13.07□□□□□ -0.32
RNF40-210ENST00000566811 H0Y8G0 127 aa13.07□□□□□ -0.32
RNF40-210ENST00000566811 SFTA2Q6UW10 78 aa13.07□□□□□ -0.32
RNF40-210ENST00000566811 TOMM7Q9P0U1 55 aa13.07□□□□□ -0.32
RNF40-210ENST00000566811 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
RNF40-210ENST00000566811 LINC01620Q4KN68 170 aa13.06□□□□□ -0.32
RNF40-210ENST00000566811 COX7B2Q8TF08 81 aa13.06□□□□□ -0.32
RNF40-210ENST00000566811 LOC107984640A0A0U1RRK4 108 aa13.05□□□□□ -0.32
RNF40-210ENST00000566811 SYS1-DBNDD2H3BUS1 97 aa13.05□□□□□ -0.32
RNF40-210ENST00000566811 DPM2O94777 84 aa13.05□□□□□ -0.32
RNF40-210ENST00000566811 AKR1D1P51857 326 aa13.04□□□□□ -0.32
RNF40-210ENST00000566811 PET117Q6UWS5 81 aa13.04□□□□□ -0.32
RNF40-210ENST00000566811 TLX1NBP0CAT3 122 aa13.03□□□□□ -0.32
RNF40-210ENST00000566811 S100A2P29034 98 aa13.03□□□□□ -0.32
RNF40-210ENST00000566811 CIRBPQ14011 172 aaKnown RBP13.03□□□□□ -0.32
RNF40-210ENST00000566811 TMEM223A0PJW6 202 aa13.02□□□□□ -0.33
RNF40-210ENST00000566811 IGKCP01834 107 aa13.02□□□□□ -0.33
RNF40-210ENST00000566811 APOBP04114 4563 aaKnown RBP13.01□□□□□ -0.33
RNF40-210ENST00000566811 UNQ6190/PRO20217Q6UXQ8 127 aa13.01□□□□□ -0.33
RNF40-210ENST00000566811 DNAH8Q96JB1 4490 aa13.01□□□□□ -0.33
RNF40-210ENST00000566811 HERVK_113P61574 105 aa13□□□□□ -0.33
RNF40-210ENST00000566811 HIST3H2BBQ8N257 126 aa13□□□□□ -0.33
RNF40-210ENST00000566811 C6orf48Q9UBA6 75 aa13□□□□□ -0.33
RNF40-210ENST00000566811 C20orf202A1L168 122 aa12.99□□□□□ -0.33
RNF40-210ENST00000566811 LINC01545Q5VT33 79 aa12.99□□□□□ -0.33
RNF40-210ENST00000566811 C2orf82Q6UX34 121 aa12.99□□□□□ -0.33
RNF40-210ENST00000566811 SPACA4Q8TDM5 124 aa12.99□□□□□ -0.33
RNF40-210ENST00000566811 FAM30AQ9NZY2 134 aa12.99□□□□□ -0.33
RNF40-210ENST00000566811 C3orf79P0CE67 100 aa12.98□□□□□ -0.33
RNF40-210ENST00000566811 C10orf25Q5T742 122 aa12.98□□□□□ -0.33
RNF40-210ENST00000566811 NDUFC2-KCTD14E9PQ53 114 aa12.97□□□□□ -0.33
RNF40-210ENST00000566811 PTTG1IPP53801 180 aa12.97□□□□□ -0.33
RNF40-210ENST00000566811 XGP55808 180 aa12.97□□□□□ -0.33
RNF40-210ENST00000566811 KRTDAPP60985 99 aa12.97□□□□□ -0.33
RNF40-210ENST00000566811 A0A096LNI7 61 aa12.96□□□□□ -0.33
RNF40-210ENST00000566811 RPL18AQ02543 176 aaKnown RBP12.96□□□□□ -0.33
RNF40-210ENST00000566811 SCXQ7RTU7 201 aa12.96□□□□□ -0.33
RNF40-210ENST00000566811 HIST1H2BLQ99880 126 aa12.96□□□□□ -0.33
RNF40-210ENST00000566811 PMCHL2Q9BQD1 86 aa12.95□□□□□ -0.34
RNF40-210ENST00000566811 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.95□□□□□ -0.34
RNF40-210ENST00000566811 IGKV2-24A0A0C4DH68 120 aa12.94□□□□□ -0.34
RNF40-210ENST00000566811 C5orf52A6NGY3 159 aa12.93□□□□□ -0.34
RNF40-210ENST00000566811 CIRBP-AS1Q8TBR5 109 aa12.93□□□□□ -0.34
RNF40-210ENST00000566811 PLEKHB2Q96CS7 222 aa12.93□□□□□ -0.34
RNF40-210ENST00000566811 SNRPEP62304 92 aaKnown RBP12.92□□□□□ -0.34
RNF40-210ENST00000566811 GAGE2BQ13066 116 aa12.92□□□□□ -0.34
RNF40-210ENST00000566811 COX17Q14061 63 aa12.92□□□□□ -0.34
RNF40-210ENST00000566811 MAJINQ3KP22 176 aa12.92□□□□□ -0.34
RNF40-210ENST00000566811 PLAC8Q9NZF1 115 aa12.92□□□□□ -0.34
RNF40-210ENST00000566811 LEPROTO15243 131 aa12.91□□□□□ -0.34
RNF40-210ENST00000566811 CHTF8P0CG12 524 aa12.91□□□□□ -0.34
RNF40-210ENST00000566811 HERV-K104P63124 156 aa12.91□□□□□ -0.34
RNF40-210ENST00000566811 Q6ZRP5 223 aa12.91□□□□□ -0.34
RNF40-210ENST00000566811 DPH3Q96FX2 82 aa12.91□□□□□ -0.34
RNF40-210ENST00000566811 ZNF625Q96I27 306 aaPredicted RBP12.91□□□□□ -0.34
RNF40-210ENST00000566811 PANO1I0J062 215 aa12.9□□□□□ -0.34
RNF40-210ENST00000566811 Q8N1X5 172 aa12.9□□□□□ -0.34
RNF40-210ENST00000566811 A0A087WYN8 130 aa12.89□□□□□ -0.35
RNF40-210ENST00000566811 LINC00587B1AMM8 73 aa12.89□□□□□ -0.35
RNF40-210ENST00000566811 E9PLD3 99 aa12.89□□□□□ -0.35
RNF40-210ENST00000566811 NMUP48645 174 aa12.89□□□□□ -0.35
RNF40-210ENST00000566811 STPG4Q8N801 248 aa12.89□□□□□ -0.35
RNF40-210ENST00000566811 HERC1Q15751 4861 aa12.89□□□□□ -0.35
RNF40-210ENST00000566811 C9orf116Q5BN46 136 aaPredicted RBP12.88□□□□□ -0.35
RNF40-210ENST00000566811 MYMXA0A1B0GTQ4 84 aa12.87□□□□□ -0.35
RNF40-210ENST00000566811 ERG28Q9UKR5 140 aa12.87□□□□□ -0.35
RNF40-210ENST00000566811 J3QQQ9 107 aa12.86□□□□□ -0.35
RNF40-210ENST00000566811 NDUFA12Q9UI09 145 aa12.86□□□□□ -0.35
RNF40-210ENST00000566811 EPM2AB3EWF7 344 aa12.85□□□□□ -0.35
RNF40-210ENST00000566811 LGALS3P17931 250 aaKnown RBP12.85□□□□□ -0.35
RNF40-210ENST00000566811 HAMPP81172 84 aa12.85□□□□□ -0.35
RNF40-210ENST00000566811 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
RNF40-210ENST00000566811 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
RNF40-210ENST00000566811 FAM229AH3BQW9 127 aa12.83□□□□□ -0.36
RNF40-210ENST00000566811 C7orf33Q8WU49 177 aa12.82□□□□□ -0.36
RNF40-210ENST00000566811 TSPEAR-AS2P59090 65 aa12.81□□□□□ -0.36
RNF40-210ENST00000566811 LINC00528Q8N1L1 170 aa12.8□□□□□ -0.36
RNF40-210ENST00000566811 PFN2P35080 140 aa12.79□□□□□ -0.36
RNF40-210ENST00000566811 MEIG1Q5JSS6 88 aa12.79□□□□□ -0.36
RNF40-210ENST00000566811 PLA2G1BP04054 148 aaKnown RBP12.78□□□□□ -0.36
RNF40-210ENST00000566811 C9orf129Q5T035 196 aaKnown RBP12.78□□□□□ -0.36
RNF40-210ENST00000566811 PLA2G2DQ9UNK4 145 aa12.78□□□□□ -0.36
RNF40-210ENST00000566811 SMR3BP02814 79 aaPredicted RBP12.77□□□□□ -0.37
RNF40-210ENST00000566811 A0A1W2PNN7 141 aa12.76□□□□□ -0.37
RNF40-210ENST00000566811 HSBP1L1C9JCN9 74 aa12.76□□□□□ -0.37
RNF40-210ENST00000566811 LINC00158P58513 81 aa12.76□□□□□ -0.37
RNF40-210ENST00000566811 Q5VSD8 79 aa12.76□□□□□ -0.37
RNF40-210ENST00000566811 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
RNF40-210ENST00000566811 FAM19A5Q7Z5A7 132 aaPredicted RBP12.74□□□□□ -0.37
RNF40-210ENST00000566811 ATOH7Q8N100 152 aa12.74□□□□□ -0.37
RNF40-210ENST00000566811 SND1-IT1Q9HBX3 110 aa12.74□□□□□ -0.37
RNF40-210ENST00000566811 TP73-AS1Q9UF72 201 aa12.74□□□□□ -0.37
RNF40-210ENST00000566811 TMA7Q9Y2S6 64 aaKnown RBP12.74□□□□□ -0.37
RNF40-210ENST00000566811 M0QXV9 152 aa12.73□□□□□ -0.37
RNF40-210ENST00000566811 SCGB1D1O95968 90 aa12.73□□□□□ -0.37
RNF40-210ENST00000566811 DMBT1Q9UGM3 2413 aaPredicted RBP12.72□□□□□ -0.37
RNF40-210ENST00000566811 SMIM13P0DJ93 91 aa12.72□□□□□ -0.37
RNF40-210ENST00000566811 IGLV5-37A0A075B6J1 123 aa12.71□□□□□ -0.37
RNF40-210ENST00000566811 IGKV2D-26A0A0A0MRZ7 120 aa12.71□□□□□ -0.37
RNF40-210ENST00000566811 FAM168BA1KXE4 195 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms