RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 CHTF8P0CG12 524 aa11.63□□□□□ -0.55
PKD1-227ENST00000564313 MAJINQ3KP22 176 aa11.63□□□□□ -0.55
PKD1-227ENST00000564313 C6orf226Q5I0X4 101 aa11.63□□□□□ -0.55
PKD1-227ENST00000564313 TOMM7Q9P0U1 55 aa11.63□□□□□ -0.55
PKD1-227ENST00000564313 A0A087WYN8 130 aa11.62□□□□□ -0.55
PKD1-227ENST00000564313 SMIM1B2RUZ4 78 aa11.62□□□□□ -0.55
PKD1-227ENST00000564313 CXCL5P42830 114 aa11.62□□□□□ -0.55
PKD1-227ENST00000564313 PTTG1IPP53801 180 aa11.62□□□□□ -0.55
PKD1-227ENST00000564313 CKS1BP61024 79 aa11.62□□□□□ -0.55
PKD1-227ENST00000564313 PLAC8Q9NZF1 115 aa11.62□□□□□ -0.55
PKD1-227ENST00000564313 TRAV12-1A0A0B4J245 112 aa11.61□□□□□ -0.55
PKD1-227ENST00000564313 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
PKD1-227ENST00000564313 UNQ6190/PRO20217Q6UXQ8 127 aa11.61□□□□□ -0.55
PKD1-227ENST00000564313 FAM19A2Q8N3H0 131 aa11.61□□□□□ -0.55
PKD1-227ENST00000564313 LEPROTL1O95214 131 aa11.6□□□□□ -0.55
PKD1-227ENST00000564313 RPL18AQ02543 176 aaKnown RBP11.6□□□□□ -0.55
PKD1-227ENST00000564313 GAGE2BQ13066 116 aa11.6□□□□□ -0.55
PKD1-227ENST00000564313 C6orf48Q9UBA6 75 aa11.6□□□□□ -0.55
PKD1-227ENST00000564313 LINC00310P59036 64 aa11.59□□□□□ -0.55
PKD1-227ENST00000564313 C10orf25Q5T742 122 aa11.59□□□□□ -0.55
PKD1-227ENST00000564313 STPG4Q8N801 248 aa11.59□□□□□ -0.55
PKD1-227ENST00000564313 CHTOPQ9Y3Y2 248 aaKnown RBP11.59□□□□□ -0.55
PKD1-227ENST00000564313 HIST1H2BKO60814 126 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HIST1H2BJP06899 126 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HIST1H2BOP23527 126 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HIST1H2BBP33778 126 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HIST1H2BDP58876 126 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HIST1H2BCP62807 126 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HIST2H2BEQ16778 126 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.58□□□□□ -0.56
PKD1-227ENST00000564313 C2orf82Q6UX34 121 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 COX7B2Q8TF08 81 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HIST1H2BHQ93079 126 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HIST1H2BNQ99877 126 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HIST1H2BMQ99879 126 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
PKD1-227ENST00000564313 F8VRH5 84 aa11.57□□□□□ -0.56
PKD1-227ENST00000564313 J3QL48 77 aa11.57□□□□□ -0.56
PKD1-227ENST00000564313 SPINK8P0C7L1 97 aa11.57□□□□□ -0.56
PKD1-227ENST00000564313 ZNF22P17026 224 aaPredicted RBP11.57□□□□□ -0.56
PKD1-227ENST00000564313 ATP6V1G1O75348 118 aa11.56□□□□□ -0.56
PKD1-227ENST00000564313 C11orf86A6NJI1 115 aa11.55□□□□□ -0.56
PKD1-227ENST00000564313 NDUFC2-KCTD14E9PQ53 114 aa11.55□□□□□ -0.56
PKD1-227ENST00000564313 C7orf33Q8WU49 177 aa11.55□□□□□ -0.56
PKD1-227ENST00000564313 IGLV5-39A0A0G2JS06 123 aa11.54□□□□□ -0.56
PKD1-227ENST00000564313 TMEM170BQ5T4T1 132 aa11.54□□□□□ -0.56
PKD1-227ENST00000564313 NUPR1O60356 82 aa11.53□□□□□ -0.56
PKD1-227ENST00000564313 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
PKD1-227ENST00000564313 Q6ZRP5 223 aa11.53□□□□□ -0.56
PKD1-227ENST00000564313 SFTA2Q6UW10 78 aa11.52□□□□□ -0.57
PKD1-227ENST00000564313 FABP4P15090 132 aa11.5□□□□□ -0.57
PKD1-227ENST00000564313 ODF1Q14990 250 aa11.5□□□□□ -0.57
PKD1-227ENST00000564313 GAGE2EQ4V326 116 aa11.5□□□□□ -0.57
PKD1-227ENST00000564313 GAGE2DQ9UEU5 116 aa11.5□□□□□ -0.57
PKD1-227ENST00000564313 H0Y8G0 127 aa11.49□□□□□ -0.57
PKD1-227ENST00000564313 C9orf116Q5BN46 136 aaPredicted RBP11.49□□□□□ -0.57
PKD1-227ENST00000564313 PLNP26678 52 aa11.48□□□□□ -0.57
PKD1-227ENST00000564313 COA6Q5JTJ3 125 aaKnown RBP11.48□□□□□ -0.57
PKD1-227ENST00000564313 MAP1LC3CQ9BXW4 147 aa11.48□□□□□ -0.57
PKD1-227ENST00000564313 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
PKD1-227ENST00000564313 KRTAP10-4P60372 401 aaPredicted RBP11.47□□□□□ -0.57
PKD1-227ENST00000564313 A0A1W2PNN7 141 aa11.46□□□□□ -0.57
PKD1-227ENST00000564313 DPM2O94777 84 aa11.43□□□□□ -0.58
PKD1-227ENST00000564313 COX17Q14061 63 aa11.42□□□□□ -0.58
PKD1-227ENST00000564313 C9orf129Q5T035 196 aaKnown RBP11.42□□□□□ -0.58
PKD1-227ENST00000564313 SERTAD4-AS1Q5TG53 156 aa11.42□□□□□ -0.58
PKD1-227ENST00000564313 IGKCP01834 107 aa11.41□□□□□ -0.58
PKD1-227ENST00000564313 FAM19A5Q7Z5A7 132 aaPredicted RBP11.41□□□□□ -0.58
PKD1-227ENST00000564313 LRP1Q07954 4544 aaKnown RBP11.4□□□□□ -0.58
PKD1-227ENST00000564313 FAM168BA1KXE4 195 aa11.4□□□□□ -0.58
PKD1-227ENST00000564313 KRTAP29-1A8MX34 341 aaPredicted RBP11.4□□□□□ -0.58
PKD1-227ENST00000564313 SYS1-DBNDD2H3BUS1 97 aa11.4□□□□□ -0.58
PKD1-227ENST00000564313 HERVK_113P61574 105 aa11.4□□□□□ -0.58
PKD1-227ENST00000564313 PRR3P79522 188 aaKnown RBP11.4□□□□□ -0.58
PKD1-227ENST00000564313 ZNF625Q96I27 306 aaPredicted RBP11.4□□□□□ -0.58
PKD1-227ENST00000564313 XAGE1AQ9HD64 81 aa11.39□□□□□ -0.59
PKD1-227ENST00000564313 ERG28Q9UKR5 140 aa11.39□□□□□ -0.59
PKD1-227ENST00000564313 M0QXV9 152 aa11.38□□□□□ -0.59
PKD1-227ENST00000564313 PET117Q6UWS5 81 aa11.38□□□□□ -0.59
PKD1-227ENST00000564313 PFN2P35080 140 aa11.37□□□□□ -0.59
PKD1-227ENST00000564313 HERV-K104P63124 156 aa11.37□□□□□ -0.59
PKD1-227ENST00000564313 PHF5AQ7RTV0 110 aaKnown RBP11.37□□□□□ -0.59
PKD1-227ENST00000564313 PLEKHB2Q96CS7 222 aa11.37□□□□□ -0.59
PKD1-227ENST00000564313 LEPROTO15243 131 aa11.36□□□□□ -0.59
PKD1-227ENST00000564313 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
PKD1-227ENST00000564313 PLA2G2DQ9UNK4 145 aa11.36□□□□□ -0.59
PKD1-227ENST00000564313 FAT3Q8TDW7 4589 aa11.36□□□□□ -0.59
PKD1-227ENST00000564313 LINC00587B1AMM8 73 aa11.35□□□□□ -0.59
PKD1-227ENST00000564313 LINC01545Q5VT33 79 aa11.35□□□□□ -0.59
PKD1-227ENST00000564313 TP73-AS1Q9UF72 201 aa11.35□□□□□ -0.59
PKD1-227ENST00000564313 MYMXA0A1B0GTQ4 84 aa11.34□□□□□ -0.59
PKD1-227ENST00000564313 LBHQ53QV2 105 aaPredicted RBP11.34□□□□□ -0.59
PKD1-227ENST00000564313 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
PKD1-227ENST00000564313 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
PKD1-227ENST00000564313 NMUP48645 174 aa11.33□□□□□ -0.6
PKD1-227ENST00000564313 UBE2BP63146 152 aa11.33□□□□□ -0.6
PKD1-227ENST00000564313 C3orf79P0CE67 100 aa11.32□□□□□ -0.6
PKD1-227ENST00000564313 PSORS1C2Q9UIG4 136 aa11.32□□□□□ -0.6
PKD1-227ENST00000564313 C22orf24Q9Y442 160 aa11.32□□□□□ -0.6
PKD1-227ENST00000564313 C20orf202A1L168 122 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms