RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 SCXQ7RTU7 201 aa10.67□□□□□ -0.7
RNF40-206ENST00000564260 Q8N1X5 172 aa10.67□□□□□ -0.7
RNF40-206ENST00000564260 MAP1LC3CQ9BXW4 147 aa10.67□□□□□ -0.7
RNF40-206ENST00000564260 PLNP26678 52 aa10.66□□□□□ -0.7
RNF40-206ENST00000564260 CIRBP-AS1Q8TBR5 109 aa10.66□□□□□ -0.7
RNF40-206ENST00000564260 COX7B2Q8TF08 81 aa10.66□□□□□ -0.7
RNF40-206ENST00000564260 C11orf86A6NJI1 115 aa10.65□□□□□ -0.7
RNF40-206ENST00000564260 PTTG1IPP53801 180 aa10.65□□□□□ -0.7
RNF40-206ENST00000564260 ODF1Q14990 250 aa10.65□□□□□ -0.7
RNF40-206ENST00000564260 TMEM170BQ5T4T1 132 aa10.65□□□□□ -0.7
RNF40-206ENST00000564260 TOMM7Q9P0U1 55 aa10.65□□□□□ -0.7
RNF40-206ENST00000564260 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.65□□□□□ -0.7
RNF40-206ENST00000564260 UNQ6190/PRO20217Q6UXQ8 127 aa10.64□□□□□ -0.71
RNF40-206ENST00000564260 PLAC8Q9NZF1 115 aa10.64□□□□□ -0.71
RNF40-206ENST00000564260 C6orf48Q9UBA6 75 aa10.64□□□□□ -0.71
RNF40-206ENST00000564260 SPINK8P0C7L1 97 aa10.63□□□□□ -0.71
RNF40-206ENST00000564260 FABP4P15090 132 aa10.63□□□□□ -0.71
RNF40-206ENST00000564260 A0A096LNI7 61 aa10.62□□□□□ -0.71
RNF40-206ENST00000564260 NDUFC2-KCTD14E9PQ53 114 aa10.62□□□□□ -0.71
RNF40-206ENST00000564260 FAM229AH3BQW9 127 aa10.62□□□□□ -0.71
RNF40-206ENST00000564260 C10orf25Q5T742 122 aa10.62□□□□□ -0.71
RNF40-206ENST00000564260 EPM2AB3EWF7 344 aa10.61□□□□□ -0.71
RNF40-206ENST00000564260 MAJINQ3KP22 176 aa10.61□□□□□ -0.71
RNF40-206ENST00000564260 C2orf82Q6UX34 121 aa10.61□□□□□ -0.71
RNF40-206ENST00000564260 DPH3Q96FX2 82 aa10.61□□□□□ -0.71
RNF40-206ENST00000564260 A0A087WYN8 130 aa10.6□□□□□ -0.71
RNF40-206ENST00000564260 IGKV2-24A0A0C4DH68 120 aa10.6□□□□□ -0.71
RNF40-206ENST00000564260 TMEM223A0PJW6 202 aa10.6□□□□□ -0.71
RNF40-206ENST00000564260 DPM2O94777 84 aa10.6□□□□□ -0.71
RNF40-206ENST00000564260 AKR1D1P51857 326 aa10.6□□□□□ -0.71
RNF40-206ENST00000564260 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
RNF40-206ENST00000564260 SYS1-DBNDD2H3BUS1 97 aa10.59□□□□□ -0.71
RNF40-206ENST00000564260 PANO1I0J062 215 aa10.59□□□□□ -0.71
RNF40-206ENST00000564260 CHTF8P0CG12 524 aa10.59□□□□□ -0.71
RNF40-206ENST00000564260 PET117Q6UWS5 81 aa10.59□□□□□ -0.71
RNF40-206ENST00000564260 IGKCP01834 107 aa10.58□□□□□ -0.72
RNF40-206ENST00000564260 GAGE2BQ13066 116 aa10.58□□□□□ -0.72
RNF40-206ENST00000564260 STPG4Q8N801 248 aa10.58□□□□□ -0.72
RNF40-206ENST00000564260 H0Y8G0 127 aa10.57□□□□□ -0.72
RNF40-206ENST00000564260 PLA2G1BP04054 148 aaKnown RBP10.57□□□□□ -0.72
RNF40-206ENST00000564260 HERVK_113P61574 105 aa10.57□□□□□ -0.72
RNF40-206ENST00000564260 COX17Q14061 63 aa10.57□□□□□ -0.72
RNF40-206ENST00000564260 Q6ZRP5 223 aa10.57□□□□□ -0.72
RNF40-206ENST00000564260 S100A6P06703 90 aa10.56□□□□□ -0.72
RNF40-206ENST00000564260 LINC00528Q8N1L1 170 aa10.56□□□□□ -0.72
RNF40-206ENST00000564260 HAMPP81172 84 aa10.55□□□□□ -0.72
RNF40-206ENST00000564260 Q5VSD8 79 aa10.55□□□□□ -0.72
RNF40-206ENST00000564260 LINC01545Q5VT33 79 aa10.55□□□□□ -0.72
RNF40-206ENST00000564260 C7orf33Q8WU49 177 aa10.55□□□□□ -0.72
RNF40-206ENST00000564260 LINC00587B1AMM8 73 aa10.54□□□□□ -0.72
RNF40-206ENST00000564260 SMR3BP02814 79 aaPredicted RBP10.54□□□□□ -0.72
RNF40-206ENST00000564260 ZNF625Q96I27 306 aaPredicted RBP10.54□□□□□ -0.72
RNF40-206ENST00000564260 C20orf202A1L168 122 aa10.53□□□□□ -0.72
RNF40-206ENST00000564260 HERV-K104P63124 156 aa10.53□□□□□ -0.72
RNF40-206ENST00000564260 PLEKHB2Q96CS7 222 aa10.53□□□□□ -0.72
RNF40-206ENST00000564260 FAT1Q14517 4588 aa10.53□□□□□ -0.72
RNF40-206ENST00000564260 C3orf79P0CE67 100 aa10.52□□□□□ -0.73
RNF40-206ENST00000564260 NMUP48645 174 aa10.52□□□□□ -0.73
RNF40-206ENST00000564260 C9orf116Q5BN46 136 aaPredicted RBP10.52□□□□□ -0.73
RNF40-206ENST00000564260 LEPROTO15243 131 aa10.51□□□□□ -0.73
RNF40-206ENST00000564260 S100A2P29034 98 aa10.51□□□□□ -0.73
RNF40-206ENST00000564260 GAGE2EQ4V326 116 aa10.51□□□□□ -0.73
RNF40-206ENST00000564260 GAGE2DQ9UEU5 116 aa10.51□□□□□ -0.73
RNF40-206ENST00000564260 HIST3H2BBQ8N257 126 aa10.5□□□□□ -0.73
RNF40-206ENST00000564260 ERG28Q9UKR5 140 aa10.5□□□□□ -0.73
RNF40-206ENST00000564260 MYMXA0A1B0GTQ4 84 aa10.49□□□□□ -0.73
RNF40-206ENST00000564260 E9PLD3 99 aa10.48□□□□□ -0.73
RNF40-206ENST00000564260 KRTDAPP60985 99 aa10.48□□□□□ -0.73
RNF40-206ENST00000564260 RPL37AP61513 92 aaKnown RBP10.48□□□□□ -0.73
RNF40-206ENST00000564260 PMCHL2Q9BQD1 86 aa10.48□□□□□ -0.73
RNF40-206ENST00000564260 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
RNF40-206ENST00000564260 PLA2G2DQ9UNK4 145 aa10.48□□□□□ -0.73
RNF40-206ENST00000564260 VPS13BQ7Z7G8 4022 aa10.48□□□□□ -0.73
RNF40-206ENST00000564260 A0A1W2PNN7 141 aa10.47□□□□□ -0.73
RNF40-206ENST00000564260 J3QQQ9 107 aa10.47□□□□□ -0.73
RNF40-206ENST00000564260 C9orf129Q5T035 196 aaKnown RBP10.47□□□□□ -0.73
RNF40-206ENST00000564260 HIST1H2BLQ99880 126 aa10.47□□□□□ -0.73
RNF40-206ENST00000564260 TP73-AS1Q9UF72 201 aa10.47□□□□□ -0.73
RNF40-206ENST00000564260 KRTAP17-1Q9BYP8 105 aa10.46□□□□□ -0.73
RNF40-206ENST00000564260 LGALS3P17931 250 aaKnown RBP10.45□□□□□ -0.74
RNF40-206ENST00000564260 SNRPEP62304 92 aaKnown RBP10.45□□□□□ -0.74
RNF40-206ENST00000564260 C5orf52A6NGY3 159 aa10.44□□□□□ -0.74
RNF40-206ENST00000564260 SRRM2Q9UQ35 2752 aaKnown RBP10.44□□□□□ -0.74
RNF40-206ENST00000564260 PFN2P35080 140 aa10.43□□□□□ -0.74
RNF40-206ENST00000564260 KRTAP10-4P60372 401 aaPredicted RBP10.43□□□□□ -0.74
RNF40-206ENST00000564260 LBHQ53QV2 105 aaPredicted RBP10.43□□□□□ -0.74
RNF40-206ENST00000564260 XAGE1AQ9HD64 81 aa10.43□□□□□ -0.74
RNF40-206ENST00000564260 IGLV5-37A0A075B6J1 123 aa10.42□□□□□ -0.74
RNF40-206ENST00000564260 M0QXV9 152 aa10.42□□□□□ -0.74
RNF40-206ENST00000564260 FAM19A5Q7Z5A7 132 aaPredicted RBP10.42□□□□□ -0.74
RNF40-206ENST00000564260 KRTAP4-5Q9BYR2 181 aa10.42□□□□□ -0.74
RNF40-206ENST00000564260 LINC00158P58513 81 aa10.41□□□□□ -0.74
RNF40-206ENST00000564260 TSPEAR-AS2P59090 65 aa10.41□□□□□ -0.74
RNF40-206ENST00000564260 MEIG1Q5JSS6 88 aa10.41□□□□□ -0.74
RNF40-206ENST00000564260 SND1-IT1Q9HBX3 110 aa10.41□□□□□ -0.74
RNF40-206ENST00000564260 FAM168BA1KXE4 195 aa10.4□□□□□ -0.74
RNF40-206ENST00000564260 INAFM2P0DMQ5 153 aa10.4□□□□□ -0.74
RNF40-206ENST00000564260 RPL24P83731 157 aaKnown RBP10.4□□□□□ -0.74
RNF40-206ENST00000564260 PRR3P79522 188 aaKnown RBP10.39□□□□□ -0.75
RNF40-206ENST00000564260 KRTAP7-1Q8IUC3 87 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms