RNA–Protein interactions for RNA: ENST00000561631.1

RPAP1-203, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-203ENST00000561631 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
RPAP1-203ENST00000561631 GAGE2EQ4V326 116 aa8.33□□□□□ -1.08
RPAP1-203ENST00000561631 GAGE2DQ9UEU5 116 aa8.33□□□□□ -1.08
RPAP1-203ENST00000561631 IGLV5-45A0A087WSX0 123 aa8.32□□□□□ -1.08
RPAP1-203ENST00000561631 SMIM1B2RUZ4 78 aa8.32□□□□□ -1.08
RPAP1-203ENST00000561631 NDUFC2-KCTD14E9PQ53 114 aa8.32□□□□□ -1.08
RPAP1-203ENST00000561631 F8VRH5 84 aa8.32□□□□□ -1.08
RPAP1-203ENST00000561631 J3QL48 77 aa8.32□□□□□ -1.08
RPAP1-203ENST00000561631 PDZD11Q5EBL8 140 aa8.32□□□□□ -1.08
RPAP1-203ENST00000561631 FAT1Q14517 4588 aa8.32□□□□□ -1.08
RPAP1-203ENST00000561631 TRGC2P03986 189 aa8.31□□□□□ -1.08
RPAP1-203ENST00000561631 SPINK8P0C7L1 97 aa8.31□□□□□ -1.08
RPAP1-203ENST00000561631 IGLC3P0DOY3 106 aa8.31□□□□□ -1.08
RPAP1-203ENST00000561631 KRTAP10-4P60372 401 aaPredicted RBP8.31□□□□□ -1.08
RPAP1-203ENST00000561631 C9orf116Q5BN46 136 aaPredicted RBP8.31□□□□□ -1.08
RPAP1-203ENST00000561631 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
RPAP1-203ENST00000561631 PRR3P79522 188 aaKnown RBP8.3□□□□□ -1.08
RPAP1-203ENST00000561631 Q6ZRP5 223 aa8.3□□□□□ -1.08
RPAP1-203ENST00000561631 FAM19A5Q7Z5A7 132 aaPredicted RBP8.3□□□□□ -1.08
RPAP1-203ENST00000561631 FLG2Q5D862 2391 aaPredicted RBP8.29□□□□□ -1.08
RPAP1-203ENST00000561631 VPS13BQ7Z7G8 4022 aa8.28□□□□□ -1.08
RPAP1-203ENST00000561631 TMEM170BQ5T4T1 132 aa8.28□□□□□ -1.08
RPAP1-203ENST00000561631 IFI27L1Q96BM0 104 aa8.28□□□□□ -1.08
RPAP1-203ENST00000561631 SRRM2Q9UQ35 2752 aaKnown RBP8.27□□□□□ -1.08
RPAP1-203ENST00000561631 A0A1W2PNN7 141 aa8.27□□□□□ -1.09
RPAP1-203ENST00000561631 ZNF22P17026 224 aaPredicted RBP8.27□□□□□ -1.09
RPAP1-203ENST00000561631 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
RPAP1-203ENST00000561631 M0QXV9 152 aa8.26□□□□□ -1.09
RPAP1-203ENST00000561631 HNRNPA3P51991 378 aaKnown RBP8.26□□□□□ -1.09
RPAP1-203ENST00000561631 C11orf86A6NJI1 115 aa8.25□□□□□ -1.09
RPAP1-203ENST00000561631 KRTAP29-1A8MX34 341 aaPredicted RBP8.25□□□□□ -1.09
RPAP1-203ENST00000561631 H0Y8G0 127 aa8.25□□□□□ -1.09
RPAP1-203ENST00000561631 SERF1AO75920 110 aa8.25□□□□□ -1.09
RPAP1-203ENST00000561631 UBE2BP63146 152 aa8.25□□□□□ -1.09
RPAP1-203ENST00000561631 FAM19A2Q8N3H0 131 aa8.25□□□□□ -1.09
RPAP1-203ENST00000561631 TRAV12-1A0A0B4J245 112 aa8.24□□□□□ -1.09
RPAP1-203ENST00000561631 FAM168BA1KXE4 195 aa8.24□□□□□ -1.09
RPAP1-203ENST00000561631 COLCA2A8K830 154 aa8.24□□□□□ -1.09
RPAP1-203ENST00000561631 LEPROTL1O95214 131 aa8.24□□□□□ -1.09
RPAP1-203ENST00000561631 OXTP01178 125 aa8.24□□□□□ -1.09
RPAP1-203ENST00000561631 SFTA2Q6UW10 78 aa8.24□□□□□ -1.09
RPAP1-203ENST00000561631 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
RPAP1-203ENST00000561631 XAGE1AQ9HD64 81 aa8.23□□□□□ -1.09
RPAP1-203ENST00000561631 HSPB8Q9UJY1 196 aa8.23□□□□□ -1.09
RPAP1-203ENST00000561631 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
RPAP1-203ENST00000561631 IGLV5-39A0A0G2JS06 123 aa8.22□□□□□ -1.09
RPAP1-203ENST00000561631 SCO1O75880 301 aa8.22□□□□□ -1.09
RPAP1-203ENST00000561631 C9orf129Q5T035 196 aaKnown RBP8.22□□□□□ -1.09
RPAP1-203ENST00000561631 C1orf137Q5JT78 98 aa8.21□□□□□ -1.1
RPAP1-203ENST00000561631 PSORS1C2Q9UIG4 136 aa8.21□□□□□ -1.1
RPAP1-203ENST00000561631 PFN2P35080 140 aa8.19□□□□□ -1.1
RPAP1-203ENST00000561631 REG3GQ6UW15 175 aa8.19□□□□□ -1.1
RPAP1-203ENST00000561631 SPINK6Q6UWN8 80 aa8.19□□□□□ -1.1
RPAP1-203ENST00000561631 FABP4P15090 132 aa8.18□□□□□ -1.1
RPAP1-203ENST00000561631 PLNP26678 52 aa8.18□□□□□ -1.1
RPAP1-203ENST00000561631 LINC00310P59036 64 aa8.18□□□□□ -1.1
RPAP1-203ENST00000561631 LBHQ53QV2 105 aaPredicted RBP8.18□□□□□ -1.1
RPAP1-203ENST00000561631 ERG28Q9UKR5 140 aa8.18□□□□□ -1.1
RPAP1-203ENST00000561631 TMEM223A0PJW6 202 aa8.17□□□□□ -1.1
RPAP1-203ENST00000561631 ODF1Q14990 250 aa8.17□□□□□ -1.1
RPAP1-203ENST00000561631 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
RPAP1-203ENST00000561631 NKAPP1Q8N9T2 125 aa8.17□□□□□ -1.1
RPAP1-203ENST00000561631 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
RPAP1-203ENST00000561631 MYCBP2O75592 4640 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST1H2BKO60814 126 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST1H2BJP06899 126 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST1H2BOP23527 126 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST1H2BBP33778 126 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST1H2BDP58876 126 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HERVK_113P61574 105 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST1H2BCP62807 126 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 COX17Q14061 63 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST2H2BEQ16778 126 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST1H2BHQ93079 126 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST1H2BNQ99877 126 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 HIST1H2BMQ99879 126 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 MAP1LC3CQ9BXW4 147 aa8.16□□□□□ -1.1
RPAP1-203ENST00000561631 MRPL55Q7Z7F7 128 aaKnown RBP8.15□□□□□ -1.1
RPAP1-203ENST00000561631 TP73-AS1Q9UF72 201 aa8.15□□□□□ -1.1
RPAP1-203ENST00000561631 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
RPAP1-203ENST00000561631 ATP6V1G1O75348 118 aa8.14□□□□□ -1.11
RPAP1-203ENST00000561631 DPM2O94777 84 aa8.14□□□□□ -1.11
RPAP1-203ENST00000561631 IGLV7-43P04211 117 aa8.14□□□□□ -1.11
RPAP1-203ENST00000561631 MEIG1Q5JSS6 88 aa8.14□□□□□ -1.11
RPAP1-203ENST00000561631 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
RPAP1-203ENST00000561631 NUPR1O60356 82 aa8.13□□□□□ -1.11
RPAP1-203ENST00000561631 LINC00158P58513 81 aa8.13□□□□□ -1.11
RPAP1-203ENST00000561631 DIRC1Q969H9 104 aa8.13□□□□□ -1.11
RPAP1-203ENST00000561631 IGKCP01834 107 aa8.12□□□□□ -1.11
RPAP1-203ENST00000561631 HERV-K104P63124 156 aa8.12□□□□□ -1.11
RPAP1-203ENST00000561631 SND1-IT1Q9HBX3 110 aa8.12□□□□□ -1.11
RPAP1-203ENST00000561631 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
RPAP1-203ENST00000561631 MYMXA0A1B0GTQ4 84 aa8.11□□□□□ -1.11
RPAP1-203ENST00000561631 LINC00587B1AMM8 73 aa8.11□□□□□ -1.11
RPAP1-203ENST00000561631 RPL24P83731 157 aaKnown RBP8.11□□□□□ -1.11
RPAP1-203ENST00000561631 PLEKHB2Q96CS7 222 aa8.11□□□□□ -1.11
RPAP1-203ENST00000561631 PMCHL2Q9BQD1 86 aa8.11□□□□□ -1.11
RPAP1-203ENST00000561631 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
RPAP1-203ENST00000561631 PKHD1L1Q86WI1 4243 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms