RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 C10orf25Q5T742 122 aa10.49□□□□□ -0.73
USB1-204ENST00000561568 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
USB1-204ENST00000561568 LINC00474Q9P2X8 69 aa10.49□□□□□ -0.73
USB1-204ENST00000561568 PET117Q6UWS5 81 aa10.48□□□□□ -0.73
USB1-204ENST00000561568 DYNC1H1Q14204 4646 aaKnown RBP10.48□□□□□ -0.73
USB1-204ENST00000561568 TMEM223A0PJW6 202 aa10.47□□□□□ -0.73
USB1-204ENST00000561568 DPM2O94777 84 aa10.47□□□□□ -0.73
USB1-204ENST00000561568 C6orf48Q9UBA6 75 aa10.47□□□□□ -0.73
USB1-204ENST00000561568 DNAH5Q8TE73 4624 aa10.46□□□□□ -0.73
USB1-204ENST00000561568 IGKCP01834 107 aa10.46□□□□□ -0.73
USB1-204ENST00000561568 S100A2P29034 98 aa10.46□□□□□ -0.73
USB1-204ENST00000561568 CIRBPQ14011 172 aaKnown RBP10.46□□□□□ -0.73
USB1-204ENST00000561568 TLX1NBP0CAT3 122 aa10.45□□□□□ -0.74
USB1-204ENST00000561568 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.45□□□□□ -0.74
USB1-204ENST00000561568 C3orf79P0CE67 100 aa10.44□□□□□ -0.74
USB1-204ENST00000561568 GAGE2BQ13066 116 aa10.44□□□□□ -0.74
USB1-204ENST00000561568 SFTA2Q6UW10 78 aa10.44□□□□□ -0.74
USB1-204ENST00000561568 HIST3H2BBQ8N257 126 aa10.44□□□□□ -0.74
USB1-204ENST00000561568 PMCHL2Q9BQD1 86 aa10.44□□□□□ -0.74
USB1-204ENST00000561568 LRP1BQ9NZR2 4599 aa10.43□□□□□ -0.74
USB1-204ENST00000561568 A0A096LNI7 61 aa10.43□□□□□ -0.74
USB1-204ENST00000561568 IGKV2-24A0A0C4DH68 120 aa10.43□□□□□ -0.74
USB1-204ENST00000561568 PTTG1IPP53801 180 aa10.43□□□□□ -0.74
USB1-204ENST00000561568 KRTDAPP60985 99 aa10.43□□□□□ -0.74
USB1-204ENST00000561568 MAJINQ3KP22 176 aa10.43□□□□□ -0.74
USB1-204ENST00000561568 LINC01545Q5VT33 79 aa10.43□□□□□ -0.74
USB1-204ENST00000561568 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
USB1-204ENST00000561568 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
USB1-204ENST00000561568 SPACA4Q8TDM5 124 aa10.43□□□□□ -0.74
USB1-204ENST00000561568 PANO1I0J062 215 aa10.42□□□□□ -0.74
USB1-204ENST00000561568 CHTF8P0CG12 524 aa10.42□□□□□ -0.74
USB1-204ENST00000561568 HERVK_113P61574 105 aa10.42□□□□□ -0.74
USB1-204ENST00000561568 SNRPEP62304 92 aaKnown RBP10.42□□□□□ -0.74
USB1-204ENST00000561568 RPL18AQ02543 176 aaKnown RBP10.42□□□□□ -0.74
USB1-204ENST00000561568 NDUFC2-KCTD14E9PQ53 114 aa10.41□□□□□ -0.74
USB1-204ENST00000561568 C9orf116Q5BN46 136 aaPredicted RBP10.41□□□□□ -0.74
USB1-204ENST00000561568 A0A087WYN8 130 aa10.4□□□□□ -0.74
USB1-204ENST00000561568 C20orf202A1L168 122 aa10.4□□□□□ -0.74
USB1-204ENST00000561568 C5orf52A6NGY3 159 aa10.4□□□□□ -0.74
USB1-204ENST00000561568 AKR1D1P51857 326 aa10.4□□□□□ -0.74
USB1-204ENST00000561568 Q6ZRP5 223 aa10.4□□□□□ -0.74
USB1-204ENST00000561568 HIST1H2BLQ99880 126 aa10.4□□□□□ -0.74
USB1-204ENST00000561568 HAMPP81172 84 aa10.39□□□□□ -0.75
USB1-204ENST00000561568 STPG4Q8N801 248 aa10.39□□□□□ -0.75
USB1-204ENST00000561568 PLAC8Q9NZF1 115 aa10.39□□□□□ -0.75
USB1-204ENST00000561568 LEPROTO15243 131 aa10.38□□□□□ -0.75
USB1-204ENST00000561568 GAGE2EQ4V326 116 aa10.38□□□□□ -0.75
USB1-204ENST00000561568 PLEKHB2Q96CS7 222 aa10.38□□□□□ -0.75
USB1-204ENST00000561568 GAGE2DQ9UEU5 116 aa10.38□□□□□ -0.75
USB1-204ENST00000561568 SMR3BP02814 79 aaPredicted RBP10.37□□□□□ -0.75
USB1-204ENST00000561568 COX17Q14061 63 aa10.37□□□□□ -0.75
USB1-204ENST00000561568 Q8N1X5 172 aa10.37□□□□□ -0.75
USB1-204ENST00000561568 KIAA1109Q2LD37 5005 aa10.37□□□□□ -0.75
USB1-204ENST00000561568 FAM229AH3BQW9 127 aa10.36□□□□□ -0.75
USB1-204ENST00000561568 ZNF625Q96I27 306 aaPredicted RBP10.36□□□□□ -0.75
USB1-204ENST00000561568 MYMXA0A1B0GTQ4 84 aa10.35□□□□□ -0.75
USB1-204ENST00000561568 LINC00587B1AMM8 73 aa10.35□□□□□ -0.75
USB1-204ENST00000561568 HERV-K104P63124 156 aa10.35□□□□□ -0.75
USB1-204ENST00000561568 EPM2AB3EWF7 344 aa10.34□□□□□ -0.75
USB1-204ENST00000561568 E9PLD3 99 aa10.34□□□□□ -0.75
USB1-204ENST00000561568 J3QQQ9 107 aa10.34□□□□□ -0.75
USB1-204ENST00000561568 NDUFA12Q9UI09 145 aa10.34□□□□□ -0.75
USB1-204ENST00000561568 ERG28Q9UKR5 140 aa10.34□□□□□ -0.75
USB1-204ENST00000561568 LGALS3P17931 250 aaKnown RBP10.33□□□□□ -0.76
USB1-204ENST00000561568 PFN2P35080 140 aa10.33□□□□□ -0.76
USB1-204ENST00000561568 NMUP48645 174 aa10.33□□□□□ -0.76
USB1-204ENST00000561568 DNAH8Q96JB1 4490 aa10.32□□□□□ -0.76
USB1-204ENST00000561568 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
USB1-204ENST00000561568 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
USB1-204ENST00000561568 RYR1P21817 5038 aa10.31□□□□□ -0.76
USB1-204ENST00000561568 APOBP04114 4563 aaKnown RBP10.3□□□□□ -0.76
USB1-204ENST00000561568 LINC00158P58513 81 aa10.3□□□□□ -0.76
USB1-204ENST00000561568 C9orf129Q5T035 196 aaKnown RBP10.3□□□□□ -0.76
USB1-204ENST00000561568 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
USB1-204ENST00000561568 TSPEAR-AS2P59090 65 aa10.29□□□□□ -0.76
USB1-204ENST00000561568 C7orf33Q8WU49 177 aa10.29□□□□□ -0.76
USB1-204ENST00000561568 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
USB1-204ENST00000561568 MEIG1Q5JSS6 88 aa10.28□□□□□ -0.76
USB1-204ENST00000561568 Q5VSD8 79 aa10.27□□□□□ -0.77
USB1-204ENST00000561568 KRTAP17-1Q9BYP8 105 aa10.27□□□□□ -0.77
USB1-204ENST00000561568 FAM168BA1KXE4 195 aa10.26□□□□□ -0.77
USB1-204ENST00000561568 SCGB1D1O95968 90 aa10.26□□□□□ -0.77
USB1-204ENST00000561568 ATOH7Q8N100 152 aa10.26□□□□□ -0.77
USB1-204ENST00000561568 SND1-IT1Q9HBX3 110 aa10.26□□□□□ -0.77
USB1-204ENST00000561568 PLA2G2DQ9UNK4 145 aa10.26□□□□□ -0.77
USB1-204ENST00000561568 SMIM13P0DJ93 91 aa10.25□□□□□ -0.77
USB1-204ENST00000561568 FAM19A5Q7Z5A7 132 aaPredicted RBP10.25□□□□□ -0.77
USB1-204ENST00000561568 HSPG2P98160 4391 aa10.25□□□□□ -0.77
USB1-204ENST00000561568 A0A0U1RRA0 63 aa10.24□□□□□ -0.77
USB1-204ENST00000561568 TMA7Q9Y2S6 64 aaKnown RBP10.24□□□□□ -0.77
USB1-204ENST00000561568 IGKV2D-26A0A0A0MRZ7 120 aa10.23□□□□□ -0.77
USB1-204ENST00000561568 HSBP1L1C9JCN9 74 aa10.23□□□□□ -0.77
USB1-204ENST00000561568 RPL37AP61513 92 aaKnown RBP10.23□□□□□ -0.77
USB1-204ENST00000561568 LBHQ53QV2 105 aaPredicted RBP10.23□□□□□ -0.77
USB1-204ENST00000561568 KRTAP7-1Q8IUC3 87 aa10.23□□□□□ -0.77
USB1-204ENST00000561568 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
USB1-204ENST00000561568 SERTAD4-AS1Q5TG53 156 aa10.22□□□□□ -0.77
USB1-204ENST00000561568 PHF5AQ7RTV0 110 aaKnown RBP10.22□□□□□ -0.77
USB1-204ENST00000561568 C22orf24Q9Y442 160 aa10.22□□□□□ -0.77
USB1-204ENST00000561568 A0A0J9YXY3 114 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms