RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SYS1-DBNDD2H3BUS1 97 aa6.92□□□□□ -1.3
TPM1-229ENST00000561242 NUPR1O60356 82 aa6.92□□□□□ -1.3
TPM1-229ENST00000561242 COA6Q5JTJ3 125 aaKnown RBP6.92□□□□□ -1.3
TPM1-229ENST00000561242 C2orf82Q6UX34 121 aa6.92□□□□□ -1.3
TPM1-229ENST00000561242 LYSTQ99698 3801 aa6.92□□□□□ -1.3
TPM1-229ENST00000561242 EPM2AB3EWF7 344 aa6.91□□□□□ -1.3
TPM1-229ENST00000561242 NDUFC2-KCTD14E9PQ53 114 aa6.91□□□□□ -1.3
TPM1-229ENST00000561242 LINC00158P58513 81 aa6.91□□□□□ -1.3
TPM1-229ENST00000561242 HERV-K104P63124 156 aa6.91□□□□□ -1.3
TPM1-229ENST00000561242 ODF1Q14990 250 aa6.91□□□□□ -1.3
TPM1-229ENST00000561242 TMEM223A0PJW6 202 aa6.9□□□□□ -1.3
TPM1-229ENST00000561242 SLPIP03973 132 aa6.9□□□□□ -1.3
TPM1-229ENST00000561242 PFN2P35080 140 aa6.9□□□□□ -1.3
TPM1-229ENST00000561242 PTTG1IPP53801 180 aa6.9□□□□□ -1.3
TPM1-229ENST00000561242 PMCHL2Q9BQD1 86 aa6.9□□□□□ -1.3
TPM1-229ENST00000561242 LEPROTO15243 131 aa6.89□□□□□ -1.31
TPM1-229ENST00000561242 SMR3BP02814 79 aaPredicted RBP6.89□□□□□ -1.31
TPM1-229ENST00000561242 S100A12P80511 92 aa6.89□□□□□ -1.31
TPM1-229ENST00000561242 COX17Q14061 63 aa6.89□□□□□ -1.31
TPM1-229ENST00000561242 KIAA0087Q14695 138 aa6.89□□□□□ -1.31
TPM1-229ENST00000561242 LBHQ53QV2 105 aaPredicted RBP6.89□□□□□ -1.31
TPM1-229ENST00000561242 MIEN1Q9BRT3 115 aa6.89□□□□□ -1.31
TPM1-229ENST00000561242 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
TPM1-229ENST00000561242 A0A087WYN8 130 aa6.88□□□□□ -1.31
TPM1-229ENST00000561242 A0A096LNI7 61 aa6.88□□□□□ -1.31
TPM1-229ENST00000561242 NMUP48645 174 aa6.88□□□□□ -1.31
TPM1-229ENST00000561242 LINC00310P59036 64 aa6.88□□□□□ -1.31
TPM1-229ENST00000561242 SNRPEP62304 92 aaKnown RBP6.88□□□□□ -1.31
TPM1-229ENST00000561242 UBE2BP63146 152 aa6.88□□□□□ -1.31
TPM1-229ENST00000561242 SCXQ7RTU7 201 aa6.88□□□□□ -1.31
TPM1-229ENST00000561242 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
TPM1-229ENST00000561242 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
TPM1-229ENST00000561242 SCGB1D1O95968 90 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 TLX1NBP0CAT3 122 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 C3orf79P0CE67 100 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 CHTF8P0CG12 524 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
TPM1-229ENST00000561242 C10orf25Q5T742 122 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 CIRBP-AS1Q8TBR5 109 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 SPACA4Q8TDM5 124 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 FAM30AQ9NZY2 134 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 NDUFA12Q9UI09 145 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 ERG28Q9UKR5 140 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 RYR2Q92736 4967 aa6.87□□□□□ -1.31
TPM1-229ENST00000561242 IGLV5-39A0A0G2JS06 123 aa6.86□□□□□ -1.31
TPM1-229ENST00000561242 J3QQQ9 107 aa6.86□□□□□ -1.31
TPM1-229ENST00000561242 RPL37AP61513 92 aaKnown RBP6.86□□□□□ -1.31
TPM1-229ENST00000561242 HAMPP81172 84 aa6.86□□□□□ -1.31
TPM1-229ENST00000561242 LINC00528Q8N1L1 170 aa6.86□□□□□ -1.31
TPM1-229ENST00000561242 C9orf116Q5BN46 136 aaPredicted RBP6.85□□□□□ -1.31
TPM1-229ENST00000561242 LINC01545Q5VT33 79 aa6.85□□□□□ -1.31
TPM1-229ENST00000561242 Q6ZSA8 131 aa6.85□□□□□ -1.31
TPM1-229ENST00000561242 FAM19A5Q7Z5A7 132 aaPredicted RBP6.85□□□□□ -1.31
TPM1-229ENST00000561242 Q8N1X5 172 aa6.85□□□□□ -1.31
TPM1-229ENST00000561242 COPS9Q8WXC6 57 aa6.85□□□□□ -1.31
TPM1-229ENST00000561242 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.85□□□□□ -1.31
TPM1-229ENST00000561242 HYDINQ4G0P3 5121 aa6.84□□□□□ -1.31
TPM1-229ENST00000561242 A0A0U1RRA0 63 aa6.84□□□□□ -1.31
TPM1-229ENST00000561242 XGP55808 180 aa6.84□□□□□ -1.31
TPM1-229ENST00000561242 SCGB1D4Q6XE38 83 aa6.84□□□□□ -1.31
TPM1-229ENST00000561242 Q6ZRP5 223 aa6.84□□□□□ -1.31
TPM1-229ENST00000561242 HIST3H2BBQ8N257 126 aa6.84□□□□□ -1.31
TPM1-229ENST00000561242 DNAH1Q9P2D7 4330 aa6.84□□□□□ -1.32
TPM1-229ENST00000561242 E9PLD3 99 aa6.83□□□□□ -1.32
TPM1-229ENST00000561242 HIST1H2BLQ99880 126 aa6.83□□□□□ -1.32
TPM1-229ENST00000561242 XAGE1AQ9HD64 81 aa6.83□□□□□ -1.32
TPM1-229ENST00000561242 PLAC8Q9NZF1 115 aa6.83□□□□□ -1.32
TPM1-229ENST00000561242 TMA7Q9Y2S6 64 aaKnown RBP6.83□□□□□ -1.32
TPM1-229ENST00000561242 VPS13DQ5THJ4 4388 aa6.83□□□□□ -1.32
TPM1-229ENST00000561242 Q5VSD8 79 aa6.82□□□□□ -1.32
TPM1-229ENST00000561242 DNAH6Q9C0G6 4158 aa6.81□□□□□ -1.32
TPM1-229ENST00000561242 ZNF815PA8K554 130 aa6.81□□□□□ -1.32
TPM1-229ENST00000561242 M0QXV9 152 aa6.81□□□□□ -1.32
TPM1-229ENST00000561242 SMIM13P0DJ93 91 aa6.8□□□□□ -1.32
TPM1-229ENST00000561242 ATOH7Q8N100 152 aa6.8□□□□□ -1.32
TPM1-229ENST00000561242 CBY1Q9Y3M2 126 aa6.8□□□□□ -1.32
TPM1-229ENST00000561242 SACSQ9NZJ4 4579 aa6.79□□□□□ -1.32
TPM1-229ENST00000561242 C5orf52A6NGY3 159 aa6.79□□□□□ -1.32
TPM1-229ENST00000561242 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
TPM1-229ENST00000561242 KRTAP17-1Q9BYP8 105 aa6.79□□□□□ -1.32
TPM1-229ENST00000561242 TMEM238C9JI98 176 aa6.78□□□□□ -1.32
TPM1-229ENST00000561242 MRPL55Q7Z7F7 128 aaKnown RBP6.78□□□□□ -1.32
TPM1-229ENST00000561242 BOD1L2Q8IYS8 172 aa6.78□□□□□ -1.32
TPM1-229ENST00000561242 MIR7-3HGQ8N6C7 128 aa6.78□□□□□ -1.32
TPM1-229ENST00000561242 SND1-IT1Q9HBX3 110 aa6.78□□□□□ -1.32
TPM1-229ENST00000561242 C22orf24Q9Y442 160 aa6.78□□□□□ -1.32
TPM1-229ENST00000561242 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
TPM1-229ENST00000561242 A0A1W2PNN7 141 aa6.77□□□□□ -1.33
TPM1-229ENST00000561242 PANO1I0J062 215 aa6.77□□□□□ -1.33
TPM1-229ENST00000561242 PHF5AQ7RTV0 110 aaKnown RBP6.77□□□□□ -1.33
TPM1-229ENST00000561242 HINT1P49773 126 aaPredicted RBP6.76□□□□□ -1.33
TPM1-229ENST00000561242 SRSF9Q13242 221 aaKnown RBP eCLIP6.76□□□□□ -1.33
TPM1-229ENST00000561242 C1orf137Q5JT78 98 aa6.76□□□□□ -1.33
TPM1-229ENST00000561242 S100A7L2Q5SY68 101 aa6.76□□□□□ -1.33
TPM1-229ENST00000561242 TP73-AS1Q9UF72 201 aa6.76□□□□□ -1.33
TPM1-229ENST00000561242 EPPK1P58107 5090 aaKnown RBP6.76□□□□□ -1.33
TPM1-229ENST00000561242 FAM168BA1KXE4 195 aa6.75□□□□□ -1.33
TPM1-229ENST00000561242 GAGE10A6NGK3 116 aa6.75□□□□□ -1.33
TPM1-229ENST00000561242 C9orf129Q5T035 196 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms