RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 FUSP35637 526 aaKnown RBP eCLIP7.75□□□□□ -1.17
RABGGTA-215ENST00000560207 HERVK_113P61574 105 aa7.75□□□□□ -1.17
RABGGTA-215ENST00000560207 LINC00526Q96FQ7 95 aa7.75□□□□□ -1.17
RABGGTA-215ENST00000560207 H0Y8G0 127 aa7.74□□□□□ -1.17
RABGGTA-215ENST00000560207 IGKCP01834 107 aa7.74□□□□□ -1.17
RABGGTA-215ENST00000560207 SPINK8P0C7L1 97 aa7.74□□□□□ -1.17
RABGGTA-215ENST00000560207 DPH3Q96FX2 82 aa7.74□□□□□ -1.17
RABGGTA-215ENST00000560207 TMEM223A0PJW6 202 aa7.73□□□□□ -1.17
RABGGTA-215ENST00000560207 LINC00587B1AMM8 73 aa7.73□□□□□ -1.17
RABGGTA-215ENST00000560207 NDUFC2-KCTD14E9PQ53 114 aa7.73□□□□□ -1.17
RABGGTA-215ENST00000560207 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
RABGGTA-215ENST00000560207 UNQ6190/PRO20217Q6UXQ8 127 aa7.73□□□□□ -1.17
RABGGTA-215ENST00000560207 XGP55808 180 aa7.72□□□□□ -1.17
RABGGTA-215ENST00000560207 COX17Q14061 63 aa7.72□□□□□ -1.17
RABGGTA-215ENST00000560207 LINC01545Q5VT33 79 aa7.72□□□□□ -1.17
RABGGTA-215ENST00000560207 SPACA4Q8TDM5 124 aa7.72□□□□□ -1.17
RABGGTA-215ENST00000560207 PTTG1IPP53801 180 aa7.71□□□□□ -1.18
RABGGTA-215ENST00000560207 PLEKHB2Q96CS7 222 aa7.71□□□□□ -1.18
RABGGTA-215ENST00000560207 C6orf48Q9UBA6 75 aa7.71□□□□□ -1.18
RABGGTA-215ENST00000560207 C3orf79P0CE67 100 aa7.7□□□□□ -1.18
RABGGTA-215ENST00000560207 NMUP48645 174 aa7.7□□□□□ -1.18
RABGGTA-215ENST00000560207 HERV-K104P63124 156 aa7.7□□□□□ -1.18
RABGGTA-215ENST00000560207 RPL18AQ02543 176 aaKnown RBP7.7□□□□□ -1.18
RABGGTA-215ENST00000560207 C2orf82Q6UX34 121 aa7.7□□□□□ -1.18
RABGGTA-215ENST00000560207 HIST3H2BBQ8N257 126 aa7.7□□□□□ -1.18
RABGGTA-215ENST00000560207 PLAC8Q9NZF1 115 aa7.7□□□□□ -1.18
RABGGTA-215ENST00000560207 FAM30AQ9NZY2 134 aa7.7□□□□□ -1.18
RABGGTA-215ENST00000560207 DYNC1H1Q14204 4646 aaKnown RBP7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 DNAH5Q8TE73 4624 aa7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 A0A096LNI7 61 aa7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 KRTDAPP60985 99 aa7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 SNRPEP62304 92 aaKnown RBP7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 GAGE2BQ13066 116 aa7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 MAJINQ3KP22 176 aa7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 C10orf25Q5T742 122 aa7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 SCXQ7RTU7 201 aa7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 CIRBP-AS1Q8TBR5 109 aa7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 KRTAP17-1Q9BYP8 105 aa7.69□□□□□ -1.18
RABGGTA-215ENST00000560207 IGKV2-24A0A0C4DH68 120 aa7.68□□□□□ -1.18
RABGGTA-215ENST00000560207 MYMXA0A1B0GTQ4 84 aa7.68□□□□□ -1.18
RABGGTA-215ENST00000560207 LEPROTO15243 131 aa7.68□□□□□ -1.18
RABGGTA-215ENST00000560207 Q8N1X5 172 aa7.68□□□□□ -1.18
RABGGTA-215ENST00000560207 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
RABGGTA-215ENST00000560207 A0A087WYN8 130 aa7.67□□□□□ -1.18
RABGGTA-215ENST00000560207 C5orf52A6NGY3 159 aa7.67□□□□□ -1.18
RABGGTA-215ENST00000560207 STPG4Q8N801 248 aa7.67□□□□□ -1.18
RABGGTA-215ENST00000560207 HIST1H2BLQ99880 126 aa7.67□□□□□ -1.18
RABGGTA-215ENST00000560207 E9PLD3 99 aa7.66□□□□□ -1.18
RABGGTA-215ENST00000560207 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
RABGGTA-215ENST00000560207 Q6ZRP5 223 aa7.66□□□□□ -1.18
RABGGTA-215ENST00000560207 C7orf33Q8WU49 177 aa7.66□□□□□ -1.18
RABGGTA-215ENST00000560207 ZNF625Q96I27 306 aaPredicted RBP7.66□□□□□ -1.18
RABGGTA-215ENST00000560207 LRP1BQ9NZR2 4599 aa7.66□□□□□ -1.18
RABGGTA-215ENST00000560207 EPM2AB3EWF7 344 aa7.65□□□□□ -1.18
RABGGTA-215ENST00000560207 J3QQQ9 107 aa7.65□□□□□ -1.18
RABGGTA-215ENST00000560207 PLA2G1BP04054 148 aaKnown RBP7.65□□□□□ -1.18
RABGGTA-215ENST00000560207 NDUFA12Q9UI09 145 aa7.65□□□□□ -1.18
RABGGTA-215ENST00000560207 ERG28Q9UKR5 140 aa7.65□□□□□ -1.18
RABGGTA-215ENST00000560207 CHTF8P0CG12 524 aa7.64□□□□□ -1.19
RABGGTA-215ENST00000560207 GAGE2EQ4V326 116 aa7.64□□□□□ -1.19
RABGGTA-215ENST00000560207 PMCHL2Q9BQD1 86 aa7.64□□□□□ -1.19
RABGGTA-215ENST00000560207 GAGE2DQ9UEU5 116 aa7.64□□□□□ -1.19
RABGGTA-215ENST00000560207 C9orf116Q5BN46 136 aaPredicted RBP7.63□□□□□ -1.19
RABGGTA-215ENST00000560207 PLA2G2DQ9UNK4 145 aa7.63□□□□□ -1.19
RABGGTA-215ENST00000560207 PANO1I0J062 215 aa7.62□□□□□ -1.19
RABGGTA-215ENST00000560207 HSBP1L1C9JCN9 74 aa7.61□□□□□ -1.19
RABGGTA-215ENST00000560207 PFN2P35080 140 aa7.61□□□□□ -1.19
RABGGTA-215ENST00000560207 RPL24P83731 157 aaKnown RBP7.61□□□□□ -1.19
RABGGTA-215ENST00000560207 LBHQ53QV2 105 aaPredicted RBP7.61□□□□□ -1.19
RABGGTA-215ENST00000560207 MEIG1Q5JSS6 88 aa7.61□□□□□ -1.19
RABGGTA-215ENST00000560207 LINC00528Q8N1L1 170 aa7.61□□□□□ -1.19
RABGGTA-215ENST00000560207 TP73-AS1Q9UF72 201 aa7.61□□□□□ -1.19
RABGGTA-215ENST00000560207 KIAA1109Q2LD37 5005 aa7.61□□□□□ -1.19
RABGGTA-215ENST00000560207 LINC00158P58513 81 aa7.6□□□□□ -1.19
RABGGTA-215ENST00000560207 SMR3BP02814 79 aaPredicted RBP7.59□□□□□ -1.19
RABGGTA-215ENST00000560207 C9orf129Q5T035 196 aaKnown RBP7.59□□□□□ -1.19
RABGGTA-215ENST00000560207 Q5VSD8 79 aa7.59□□□□□ -1.19
RABGGTA-215ENST00000560207 APOBP04114 4563 aaKnown RBP7.58□□□□□ -1.2
RABGGTA-215ENST00000560207 A0A1W2PNN7 141 aa7.58□□□□□ -1.2
RABGGTA-215ENST00000560207 DNAH8Q96JB1 4490 aa7.58□□□□□ -1.2
RABGGTA-215ENST00000560207 IGLV5-37A0A075B6J1 123 aa7.57□□□□□ -1.2
RABGGTA-215ENST00000560207 TIMM17BO60830 172 aa7.57□□□□□ -1.2
RABGGTA-215ENST00000560207 SCGB1D1O95968 90 aa7.57□□□□□ -1.2
RABGGTA-215ENST00000560207 RPL37AP61513 92 aaKnown RBP7.57□□□□□ -1.2
RABGGTA-215ENST00000560207 HAMPP81172 84 aa7.57□□□□□ -1.2
RABGGTA-215ENST00000560207 NKAPP1Q8N9T2 125 aa7.57□□□□□ -1.2
RABGGTA-215ENST00000560207 COPS9Q8WXC6 57 aa7.57□□□□□ -1.2
RABGGTA-215ENST00000560207 SND1-IT1Q9HBX3 110 aa7.57□□□□□ -1.2
RABGGTA-215ENST00000560207 XAGE1AQ9HD64 81 aa7.57□□□□□ -1.2
RABGGTA-215ENST00000560207 M0QXV9 152 aa7.56□□□□□ -1.2
RABGGTA-215ENST00000560207 TSPEAR-AS2P59090 65 aa7.56□□□□□ -1.2
RABGGTA-215ENST00000560207 MIEN1Q9BRT3 115 aa7.56□□□□□ -1.2
RABGGTA-215ENST00000560207 RYR1P21817 5038 aa7.56□□□□□ -1.2
RABGGTA-215ENST00000560207 LOC107984156A0A0G2JMH3 177 aa7.55□□□□□ -1.2
RABGGTA-215ENST00000560207 ZNF815PA8K554 130 aa7.55□□□□□ -1.2
RABGGTA-215ENST00000560207 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
RABGGTA-215ENST00000560207 FAM19A5Q7Z5A7 132 aaPredicted RBP7.55□□□□□ -1.2
RABGGTA-215ENST00000560207 ARL17AQ8IVW1 177 aa7.55□□□□□ -1.2
RABGGTA-215ENST00000560207 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms