RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 SMIM7Q9BQ49 75 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 GEMIN7Q9H840 131 aaKnown RBP3.45□□□□□ -1.86
SMAD3-209ENST00000558894 PLA2G2DQ9UNK4 145 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 UBE2D4Q9Y2X8 147 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 IGHV1-58A0A0C4DH39 117 aa3.44□□□□□ -1.86
SMAD3-209ENST00000558894 IGKV2-24A0A0C4DH68 120 aa3.44□□□□□ -1.86
SMAD3-209ENST00000558894 SMIM27A0A1W2PRY6 76 aa3.44□□□□□ -1.86
SMAD3-209ENST00000558894 IGLC3P0DOY3 106 aa3.44□□□□□ -1.86
SMAD3-209ENST00000558894 KRTAP10-8P60410 259 aa3.44□□□□□ -1.86
SMAD3-209ENST00000558894 BATFQ16520 125 aa3.44□□□□□ -1.86
SMAD3-209ENST00000558894 MRPL51Q4U2R6 128 aaKnown RBP3.44□□□□□ -1.86
SMAD3-209ENST00000558894 CD164L2Q6UWJ8 174 aa3.44□□□□□ -1.86
SMAD3-209ENST00000558894 LINC01600Q96MT4 127 aa3.44□□□□□ -1.86
SMAD3-209ENST00000558894 EIF5A2Q9GZV4 153 aaKnown RBP3.44□□□□□ -1.86
SMAD3-209ENST00000558894 CSDC2Q9Y534 153 aaKnown RBP3.44□□□□□ -1.86
SMAD3-209ENST00000558894 IGLV4-69A0A075B6H9 119 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 TRAV9-1A0A075B6T8 112 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 A0A1W2PNN7 141 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 VCYO14598 125 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 SUMO2P61956 95 aaKnown RBP3.43□□□□□ -1.86
SMAD3-209ENST00000558894 RPL32P62910 135 aaKnown RBP3.43□□□□□ -1.86
SMAD3-209ENST00000558894 RPL24P83731 157 aaKnown RBP3.43□□□□□ -1.86
SMAD3-209ENST00000558894 HSD52Q0P140 79 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 FAM104BQ5XKR9 115 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 Q6ZN92 141 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 FA2HQ7L5A8 372 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 BOD1L2Q8IYS8 172 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 TMEM101Q96IK0 257 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 NAT8BQ9UHF3 227 aa3.43□□□□□ -1.86
SMAD3-209ENST00000558894 A0A1B0GXF2 115 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 A6NDN8 102 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 SYCNQ0VAF6 134 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 RIGQ13278 110 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 SS18Q15532 418 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 RNASE13Q5GAN3 156 aaKnown RBP3.42□□□□□ -1.86
SMAD3-209ENST00000558894 Q6ZUT4 128 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 BORCS7Q96B45 105 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 DPH3Q96FX2 82 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 CARD19Q96LW7 228 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 OPRPNQ99935 248 aaPredicted RBP3.42□□□□□ -1.86
SMAD3-209ENST00000558894 TIMM21Q9BVV7 248 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 ERG28Q9UKR5 140 aa3.42□□□□□ -1.86
SMAD3-209ENST00000558894 A0A0J9YXV3 536 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 LOC100996750A0A140TA64 210 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.41□□□□□ -1.86
SMAD3-209ENST00000558894 TAX1BP3O14907 124 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 CAMPP49913 170 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 RPL39P62891 51 aaKnown RBP3.41□□□□□ -1.86
SMAD3-209ENST00000558894 SEC11AP67812 179 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 SPATA45Q537H7 98 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 SPINK6Q6UWN8 80 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 KRTAP11-1Q8IUC1 163 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 KRTAP7-1Q8IUC3 87 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 C7orf33Q8WU49 177 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 PMCHL2Q9BQD1 86 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 C20orf78Q9BR46 151 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 TMEM126AQ9H061 195 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
SMAD3-209ENST00000558894 IGHV3OR16-9A0A0B4J2B5 98 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 GAGE10A6NGK3 116 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 B5MCH6 92 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 K7EP34 96 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 COX7A2LO14548 114 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 PPP1R17O96001 155 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 NPYP01303 97 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 ADIRFQ15847 76 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 C5orf38Q86SI9 138 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 C2orf48Q96LS8 159 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 SMIM2Q9BVW6 85 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 SPANXDQ9BXN6 97 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 LINC00474Q9P2X8 69 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 HSPB8Q9UJY1 196 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 CYSLTR1Q9Y271 337 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 PAM16Q9Y3D7 125 aa3.4□□□□□ -1.87
SMAD3-209ENST00000558894 TRAV13-1A0A0B4J241 112 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 LOC107984640A0A0U1RRK4 108 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 D6R8Y8 96 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 APOMO95445 188 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 FCER1GP30273 86 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 CKS2P33552 79 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 MRPS36P82909 103 aaKnown RBP3.39□□□□□ -1.87
SMAD3-209ENST00000558894 SMAGPQ0VAQ4 97 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 GAGE2BQ13066 116 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 KIAA0087Q14695 138 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 C9orf116Q5BN46 136 aaPredicted RBP3.39□□□□□ -1.87
SMAD3-209ENST00000558894 C10orf25Q5T742 122 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 Q6ZRP5 223 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 KIR2DL4Q99706 377 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 PSORS1C2Q9UIG4 136 aa3.39□□□□□ -1.87
SMAD3-209ENST00000558894 FAM168BA1KXE4 195 aa3.38□□□□□ -1.87
SMAD3-209ENST00000558894 H3BRM9 83 aa3.38□□□□□ -1.87
SMAD3-209ENST00000558894 TLX1NBP0CAT3 122 aa3.38□□□□□ -1.87
SMAD3-209ENST00000558894 HINT1P49773 126 aaPredicted RBP3.38□□□□□ -1.87
SMAD3-209ENST00000558894 HBBP68871 147 aa3.38□□□□□ -1.87
SMAD3-209ENST00000558894 LINC00242Q5T6M2 205 aa3.38□□□□□ -1.87
SMAD3-209ENST00000558894 PHF5AQ7RTV0 110 aaKnown RBP3.38□□□□□ -1.87
SMAD3-209ENST00000558894 SMIM20Q8N5G0 67 aa3.38□□□□□ -1.87
SMAD3-209ENST00000558894 CAMK2N2Q96S95 79 aa3.38□□□□□ -1.87
SMAD3-209ENST00000558894 MRPL35Q9NZE8 188 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms